Contig 000919:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008K22Sequence612000919 (4)emb|CDP02419.1|1e-21unnamed protein product [Coffea canephora]
JMFF020E06Sequence578000919 (4)emb|CDP02419.1|1e-23unnamed protein product [Coffea canephora]651013696 (4)gb|EYU44316.1|4e-58hypothetical protein MIMGU_mgv1a004819mg [Erythranthe guttata]
JMSF041F18Sequence791000919 (4)emb|CDP02419.1|4e-61unnamed protein product [Coffea canephora]750013696 (4)emb|CDP02419.1|1e-103unnamed protein product [Coffea canephora]
JMSF042D14Sequence744000919 (4)emb|CDP02419.1|7e-49unnamed protein product [Coffea canephora]768013696 (4)emb|CDP02419.1|5e-77unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF041F18+                                                            CCTTGTAGCAA
                      ____________________________________________________________
consensus                                                              CCTTGTAGCAA
 
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JMSF041F18+           GATTTATGGTACGGGCGATTATCAGACACTGAAAACTCGTAGTCAGAAATGGGAATGTTG
JMSF042D14+                                                 GTAGTCAGAAATGGGAATGTTG
                      ____________________________________________________________
consensus             GATTTATGGTACGGGCGATTATCAGACACTGAAAACTCGTAGTCAGAAATGGGAATGTTG
 
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JMSF041F18+           CAAGAATTGCATCGGAAGCATTCGGGATGCCAGACAGCTCCCATACAGCTCAAAAATCGC
JMSF042D14+           CAAGAATTGCATCGGAAGCATTCGGGATGCCAGACAGCTCCCATACAGCTCAAAAATCGC
                      ____________________________________________________________
consensus             CAAGAATTGCATCGGAAGCATTCGGGATGCCAGACAGCTCCCATACAGCTCAAAAATCGC
 
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JMFF008K22+                                                          TGGGTAGAAGTAT
JMSF041F18+           CCGTGGCCAATCTCATTATTGCAGCCAGCACAAATCCTGTAGCCAGGTGGGTAGAAGTAT
JMSF042D14+           CCGTGGCCAATCTCATTATTGCAGCCAGCACAAATCCTGTAGCCAGGTGGGTAGAAGTAT
                      ____________________________________________________________
consensus             CCGTGGCCAATCTCATTATTGCAGCCAGCACAAATCCTGTAGCCAGGTGGGTAGAAGTAT
 
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JMFF020E06+                    GGAAAGAAAGTTTCGTAATCATTGCGCCTTGGCGGGGAGGAGTCCACGTAT
JMFF008K22+           GGATATGGTGGAAAGAAAGTTTCGTAATCATTGCGCCTTGGCGGGGAGGAGTCCACGTAT
JMSF041F18+           GGATATGGTGGAAAGAAAGTTTCGTAATCATTGCGCCTTGGCGGGGAGGAGTCCACGTAT
JMSF042D14+           GGATATGGTGGAAAGAAAGTTTCGTAATCATTGCGCCTTGGCGGGGAGGAGTCCACGTAT
                      ____________________________________________________________
consensus             GGATATGGTGGAAAGAAAGTTTCGTAATCATTGCGCCTTGGCGGGGAGGAGTCCACGTAT
 
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JMFF020E06+           AAACTCTCCTGAATCGCCTTGGCCAACATTTCGTCTTCCTCTATATCTGCTTCGGGTTCA
JMFF008K22+           AAACTCTCCTGAATCGCCTTGGCCAACATTTCGTCTTCCTCTATATCTGCTTCGGGTTCA
JMSF041F18+           AAACTCTCCTGAATCGCCTTGGCCAACATTTCGTCTTCCTCTATATCTGCTTCGGGTTCA
JMSF042D14+           AAACTCTCNTGAATCGCCTTGGCCAACATTTCGTCTTCCTCTATATCTGCTTCGGGTTCA
                      ____________________________________________________________
consensus             AAACTCTCCTGAATCGCCTTGGCCAACATTTCGTCTTCCTCTATATCTGCTTCGGGTTCA
 
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JMFF020E06+           ATTACTCTTTTCCCCTTCTCATCTTCTTTCTCATCTTCTTTGTGGTCTTCAATCACATCA
JMFF008K22+           ATTACTCTTTTCCCCTTCTCATCTTCTTTCTCATCTTCTTTGTGGTCTTCAATCACATCA
JMSF041F18+           ATTACTCTTTTCCCCTTCTCATCTTCTTTCTCATCTTCTTTGTGGTCTTCAATCACATCA
JMSF042D14+           ATTACTCTTTTCCCCTTNTCATCTTCTTTCTCATCTTCTTTGTGGTCTTCAATCACATCA
                      ____________________________________________________________
consensus             ATTACTCTTTTCCCCTTCTCATCTTCTTTCTCATCTTCTTTGTGGTCTTCAATCACATCA
 
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JMFF020E06+           TCCTTTTGGTCGTCTTCCTTCTCATCTTCCTTCTGGTCTTCATCAACAAGCGAGAGTGCA
JMFF008K22+           TCCTTTTGGTCGTCTTCCTTCTCATCTTCCTTCTGGTCTTCATCAACAAGCGAGAGTGCA
JMSF041F18+           TCCTTTTGGTCGTCTTCCTTCTCATCTTCCTTCTGGTCTTCATCAACAAGCGAGAGTGCA
JMSF042D14+           TCCTTTTGGTCGTCTTCCTTCTCATCTTCCTTCTGGTCTTCATCAACAAGCGAGAGTGCA
                      ____________________________________________________________
consensus             TCCTTTTGGTCGTCTTCCTTCTCATCTTCCTTCTGGTCTTCATCAACAAGCGAGAGTGCA
 
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JMFF020E06+           ATGGCAAGATCGATTTCTTCGTTATCAAAATCCGACCTTTCATCTGTGGATGTTCTTGGC
JMFF008K22+           ATGGCAAGATCGATTTCTTCGTTATCAAAATCCGACCTTTCATCTGTGGATGTTCTTGGC
JMSF041F18+           ATGGCAAGATCGATTTCTTCGTTATCAAAATCCGACCTTTCATCTGTGGATGTTCTTGGC
JMSF042D14+           ATGGCAAGATCGATTTCTTCGTTATCAAAATCCGACCTTTCATCTGTGGATGTTCTTGGC
                      ____________________________________________________________
consensus             ATGGCAAGATCGATTTCTTCGTTATCAAAATCCGACCTTTCATCTGTGGATGTTCTTGGC
 
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JMFF020E06+           CGTTCCCAGAAGGCGTCATCCTCGAATCTCCCATGGTGTTGCCCTTGTGATATCCTGTGC
JMFF008K22+           CGTTCCCAGAAGGCGTCATCCTCGAATCTCCCATGGTGTTGCCCTTGTGATATCCTGTGC
JMSF041F18+           CGTTCCCAGAAGGCGTCATCCTCGAATCTCCCATGGTGTTGCCCTTGTGATATCCTGTGC
JMSF042D14+           CGTTCCCAGAAGGCGTCATCCTCGAATCTCCCATGGTGTTGCCCTTGTGATATCCTGTGC
                      ____________________________________________________________
consensus             CGTTCCCAGAAGGCGTCATCCTCGAATCTCCCATGGTGTTGCCCTTGTGATATCCTGTGC
 
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JMFF020E06+           TTACTGCCATGGCTGAAACCTTTGAAAATCTTGGACAGCCAACCCATAAAGAATCGAATC
JMFF008K22+           TTACTGCCATGGCTGAAACCTTTGAAAATCTTGGACAGCCAACCCATAAAGAATCGAATC
JMSF041F18+           TTACTGCCATGGCTGAAACCTTTGAAAATCTTGGACAGCCAACCCATAAAGAATCAAATC
JMSF042D14+           TTACTGCCATGGCTGAAACCTTTGAAAATCTTGGACAGCCAACCCATAAAGAATCGAATC
                      ____________________________________________________________
consensus             TTACTGCCATGGCTGAAACCTTTGAAAATCTTGGACAGCCAACCCATAAAGAATCGAATC
 
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JMFF020E06+           CCGCCCGGCCTGTTACAGTAGGAGGAGAATCAGCAGAGATGCTCCAAGGAATCTGAAGAA
JMFF008K22+           CCGCCCGGCCTGTTACAGTAGGAGGAGAATCAGCAGAGATGCTCCAAGGAATCTGAAGAA
JMSF041F18+           CCGCCCGGCCTGTTACAGTAGGAGGAGAATCAGCAGAGATGCTCCAAGGAATCTGAAGAA
JMSF042D14+           CCGCCCGGCCTGTTACAGTAGGAGGAGAATCAGCAGAGATGCTCCAAGGAATCTGAAGAA
                      ____________________________________________________________
consensus             CCGCCCGGCCTGTTACAGTAGGAGGAGAATCAGCAGAGATGCTCCAAGGAATCTGAAGAA
 
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JMFF020E06+           ACCAAATCAGACAAAAGCCACCAAATTCATCTTGGAAGCATACTCAAGGCTGGGAAGTAG
JMFF008K22+           ACCAAATCAGACAAAAGCCACCAAATTCATCTTGGAAGCATACTCAAGGCTGGGAAGTAG
JMSF041F18+           ACCAAATCAGACAAAAGCCACCAAATTCATCTTGGAAGCATACTCAAGGCTGGGAAGTAG
JMSF042D14+           ACCAAATCAGACAAAAGCCACCAAATTCATCTTGGAAGCATACTCAAGGCTGGGAAGTAG
                      ____________________________________________________________
consensus             ACCAAATCAGACAAAAGCCACCAAATTCATCTTGGAAGCATACTCAAGGCTGGGAAGTAG
 
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JMFF020E06+           CAGAGATGACAAGAAAGATTTTCCACTTCCCCACATACCACACCACC             
JMFF008K22+           CAGAGATGACAAGAAAGATTTTCCACTTCCCCACATACCACACCACCAATTATTCCAT  
JMSF041F18+           CAGAGATGACAAGAAAGATTTTCCACTTCCCCACATACCACACCACCAATTATTCCAT  
JMSF042D14+           CAGAGATGACAAGAAAGATTTTCCACTTCCCCACATACCACACCACCAATTATTCCATCC
                      ____________________________________________________________
consensus             CAGAGATGACAAGAAAGATTTTCCACTTCCCCACATACCACACCACCAATTATTCCATCC