Contig 000910:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027I12Sequence533000910 (5)emb|CDO98163.1|8e-43unnamed protein product [Coffea canephora]715006965 (3)emb|CAN82448.1|2e-84hypothetical protein VITISV_027711 [Vitis vinifera]
JMFF045N21Sequence645000910 (5)ref|XP_009615621.1|317PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana tomentosiformis]649006965 (3)ref|XP_009784374.1|206PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana sylvestris]
JMFS138A08Sequence616000910 (5)ref|XP_009784374.1|228PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana sylvestris]
JMSF014E02Sequence167000910 (5)
JMSF041B05Sequence620000910 (5)ref|XP_009784374.1|171PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana sylvestris]755006965 (3)emb|CAN82448.1|1e-86hypothetical protein VITISV_027711 [Vitis vinifera]

Alignment

This contig is upended


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JMFS138A08+                                     CAAGAAGTAAATACGGGATCCCAAAATCACCAAG
JMFF045N21+                                     CAAGAAGTAAATACGGGATCCCAAAATCACCAAG
                      ____________________________________________________________
consensus                                       CAAGAAGTAAATACGGGATCCCAAAATCACCAAG
 
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JMFS138A08+           GAAAGCTTGATCGCGTTCATTCAAAAGGAAATTAGTTGGCTTAAGGTTCAGAACAAGGAT
JMFF045N21+           GAAAGCTTGATCGCGTTCATTCAAAAGGAAATTAGTTGGCTTAAGGTTCAGAACAAGGAT
                      ____________________________________________________________
consensus             GAAAGCTTGATCGCGTTCATTCAAAAGGAAATTAGTTGGCTTAAGGTTCAGAACAAGGAT
 
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JMFS138A08+           ATCCATTGAGTGCATCTCTTGGATCCCTTTAGCCAATTCGATCCCATATCTCAAAGCTTC
JMFF045N21+           ATCCATTGAGTGCATCTCTTGGATCCCTTTAGCCAATTCGATCCCATATCTCAAAACATC
                      ____________________________________________________________
consensus             ATCCATTGAGTGCATCTCTTGGATCCCTTTAGCCAATTCGATCCCATATCTCAAAGCTTC
 
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JMFS138A08+           CTTTATCTGATGTTTTGAGATATGGGAAGCTTTCCTCCTTTTAGTCGGGCAATTTGGTCT
JMFF045N21+           -----------------AGATAAAGGAAGCTTTCCTCCTTTTAGTCGGGCAATTTGGTCT
                      ____________________________________________________________
consensus             CTTTATCTGATGTTTTGAGATATGGGAAGCTTTCCTCCTTTTAGTCGGGCAATTTGGTCT
 
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JMFS138A08+           CCTATCGACCACTCATAGAATTTCATCGCTATGCAGAGCTTTCCCGATATAACAGACATA
JMFF045N21+           CGTATCGACCACTCATAGAATTTCATCGCTATGCAGAGCTTTCCCGATATAACAGACATA
                      ____________________________________________________________
consensus             CGTATCGACCACTCATAGAATTTCATCGCTATGCAGAGCTTTCCCGATATAACAGACATA
 
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JMFS138A08+           CCATGCAACCAACAAACACCTTGCACTTGTTTGGACTTCAAATTCATCCAAACCTCCTCA
JMFF045N21+           CCATGCAACCAACAAACACCTTGCACTTGTTTGGACTTCAAATTCATCCAAACCTCCTCA
JMFF027I12+                                                      TCATCCAAACCTCCTCA
JMSF041B05+               GCAACCANCAAACACNTTGCANTTGTTTGGANTTCAAATTCATCCAAACCTCCTCA
                      ____________________________________________________________
consensus             CCATGCAACCAACAAACACCTTGCACTTGTTTGGACTTCAAATTCATCCAAACCTCCTCA
 
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JMFS138A08+           AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
JMFF045N21+           AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
JMFF027I12+           AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
JMSF041B05+           AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
                      ____________________________________________________________
consensus             AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
 
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JMFS138A08+           ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
JMFF045N21+           ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
JMFF027I12+           ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
JMSF041B05+           ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
                      ____________________________________________________________
consensus             ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
 
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JMFS138A08+           CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
JMFF045N21+           CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
JMFF027I12+           CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
JMSF041B05+           CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
                      ____________________________________________________________
consensus             CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
 
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JMFS138A08+           CTGGGCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
JMFF045N21+           CTGGTCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
rJMSF014E02+                      GGGGTCGCGNCANCAGTTGTAAGATGGTNGGGATCTCGTTCATANAGN
JMFF027I12+           CTGGGCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
JMSF041B05+           CTGGGCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
                      ____________________________________________________________
consensus             CTGGGCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
 
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JMFS138A08+           TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCT                  
JMFF045N21+           TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCTTTATCCATTCCCCTTCT 
rJMSF014E02+          TCGTAATCNAANGGAGGCNCCGAGGTGGCCGGTTTAATATCTTTATCCATTCCCNTTCT 
JMFF027I12+           TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCTTTATCCATTCCCCTTCTT
JMSF041B05+           TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCTTTATCCATTCCCCTTCTT
                      ____________________________________________________________
consensus             TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCTTTATCCATTCCCCTTCTT
 
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JMFF027I12+           TACGTGAAGTATTGGAAGTGAAAAGTAGTGCGACGGCGAGCTAGAAGCCAGGGGAGTGGC
JMSF041B05+           TACGTGAAGTATTGGAAGTGAAAAGTAGTGCGACGGCGAGCTAGAAGCCAGGGGAGTGGC
                      ____________________________________________________________
consensus             TACGTGAAGTATTGGAAGTGAAAAGTAGTGCGACGGCGAGCTAGAAGCCAGGGGAGTGGC
 
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JMFF027I12+           GTTCACGGAGCGAGAAAGAGGTAGAAATGGACAAAAAAGGGTTTGAGCGAAAACACGGCA
JMSF041B05+           GTTCACGGAGCGAGAAAGAGGTAGAAATGGACAAAAAAGGGTTTGAGCGAAAACACGGCA
                      ____________________________________________________________
consensus             GTTCACGGAGCGAGAAAGAGGTAGAAATGGACAAAAAAGGGTTTGAGCGAAAACACGGCA
 
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JMFF027I12+           CCGAGGAAGAGTACAAAACGGGGGTCGGAGGAGTCACGGCCGTCCACTTCTCCGGAGCTC
JMSF041B05+           CCGAGGAAGAGTACAAAACGGGGGTCGGAGGAGTCACGGCCGTCCACTTCTCCGGAGCTC
                      ____________________________________________________________
consensus             CCGAGGAAGAGTACAAAACGGGGGTCGGAGGAGTCACGGCCGTCCACTTCTCCGGAGCTC
 
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JMFF027I12+           GCCTTTGCCTTCACGCCGGTTCTCTTTCTTCTTTT                         
JMSF041B05+           GCCTTTGCCTTCACGCCGGTTCTCTTTCTTCTTTTGACTTTTCTACGTACGTTAAAGCTC
                      ____________________________________________________________
consensus             GCCTTTGCCTTCACGCCGGTTCTCTTTCTTCTTTTGACTTTTCTACGTACGTTAAAGCTC