Contig 000910:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027I12Sequence533000910 (5)emb|CDO98163.1|8e-43unnamed protein product [Coffea canephora]715006965 (3)emb|CAN82448.1|2e-84hypothetical protein VITISV_027711 [Vitis vinifera]
JMFF045N21Sequence645000910 (5)ref|XP_009615621.1|317PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana tomentosiformis]649006965 (3)ref|XP_009784374.1|206PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana sylvestris]
JMFS138A08Sequence616000910 (5)ref|XP_009784374.1|228PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana sylvestris]
JMSF014E02Sequence167000910 (5)
JMSF041B05Sequence620000910 (5)ref|XP_009784374.1|171PREDICTED: E3 ubiquitin-protein ligase KEG-like [Nicotiana sylvestris]755006965 (3)emb|CAN82448.1|1e-86hypothetical protein VITISV_027711 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS138A08+ CAAGAAGTAAATACGGGATCCCAAAATCACCAAG
JMFF045N21+ CAAGAAGTAAATACGGGATCCCAAAATCACCAAG
                      ____________________________________________________________
consensus CAAGAAGTAAATACGGGATCCCAAAATCACCAAG
 
. : . : . : . : . : . :
JMFS138A08+ GAAAGCTTGATCGCGTTCATTCAAAAGGAAATTAGTTGGCTTAAGGTTCAGAACAAGGAT
JMFF045N21+ GAAAGCTTGATCGCGTTCATTCAAAAGGAAATTAGTTGGCTTAAGGTTCAGAACAAGGAT
                      ____________________________________________________________
consensus GAAAGCTTGATCGCGTTCATTCAAAAGGAAATTAGTTGGCTTAAGGTTCAGAACAAGGAT
 
. : . : . : . : . : . :
JMFS138A08+ ATCCATTGAGTGCATCTCTTGGATCCCTTTAGCCAATTCGATCCCATATCTCAAAGCTTC
JMFF045N21+ ATCCATTGAGTGCATCTCTTGGATCCCTTTAGCCAATTCGATCCCATATCTCAAAACATC
                      ____________________________________________________________
consensus ATCCATTGAGTGCATCTCTTGGATCCCTTTAGCCAATTCGATCCCATATCTCAAAGCTTC
 
. : . : . : . : . : . :
JMFS138A08+ CTTTATCTGATGTTTTGAGATATGGGAAGCTTTCCTCCTTTTAGTCGGGCAATTTGGTCT
JMFF045N21+ -----------------AGATAAAGGAAGCTTTCCTCCTTTTAGTCGGGCAATTTGGTCT
                      ____________________________________________________________
consensus CTTTATCTGATGTTTTGAGATATGGGAAGCTTTCCTCCTTTTAGTCGGGCAATTTGGTCT
 
. : . : . : . : . : . :
JMFS138A08+ CCTATCGACCACTCATAGAATTTCATCGCTATGCAGAGCTTTCCCGATATAACAGACATA
JMFF045N21+ CGTATCGACCACTCATAGAATTTCATCGCTATGCAGAGCTTTCCCGATATAACAGACATA
                      ____________________________________________________________
consensus CGTATCGACCACTCATAGAATTTCATCGCTATGCAGAGCTTTCCCGATATAACAGACATA
 
. : . : . : . : . : . :
JMFS138A08+ CCATGCAACCAACAAACACCTTGCACTTGTTTGGACTTCAAATTCATCCAAACCTCCTCA
JMFF045N21+ CCATGCAACCAACAAACACCTTGCACTTGTTTGGACTTCAAATTCATCCAAACCTCCTCA
JMFF027I12+ TCATCCAAACCTCCTCA
JMSF041B05+ GCAACCANCAAACACNTTGCANTTGTTTGGANTTCAAATTCATCCAAACCTCCTCA
                      ____________________________________________________________
consensus CCATGCAACCAACAAACACCTTGCACTTGTTTGGACTTCAAATTCATCCAAACCTCCTCA
 
. : . : . : . : . : . :
JMFS138A08+ AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
JMFF045N21+ AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
JMFF027I12+ AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
JMSF041B05+ AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
                      ____________________________________________________________
consensus AACTTACTGGTAAAGTGCTTCACATGATGTTCACTTATAGGATACAACATCTTCACAGCC
 
. : . : . : . : . : . :
JMFS138A08+ ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
JMFF045N21+ ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
JMFF027I12+ ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
JMSF041B05+ ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
                      ____________________________________________________________
consensus ACTTCATGATACTCATCAAAATCAGCACCTGTATGATGATGTGTAGCTAACCAAACATCC
 
. : . : . : . : . : . :
JMFS138A08+ CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
JMFF045N21+ CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
JMFF027I12+ CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
JMSF041B05+ CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
                      ____________________________________________________________
consensus CCAAAGTATCCACGCCCAATCCTGTGTTTCAGCTTTAGTGAAACAGGGTCGATATACGGA
 
. : . : . : . : . : . :
JMFS138A08+ CTGGGCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
JMFF045N21+ CTGGTCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
rJMSF014E02+ GGGGTCGCGNCANCAGTTGTAAGATGGTNGGGATCTCGTTCATANAGN
JMFF027I12+ CTGGGCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
JMSF041B05+ CTGGGCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
                      ____________________________________________________________
consensus CTGGGCAGAGCAGGGGTCGCGACAACAGTTGTAAGATGGTCGGGATCTCCTTCATAAAGC
 
. : . : . : . : . : . :
JMFS138A08+ TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCT
JMFF045N21+ TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCTTTATCCATTCCCCTTCT
rJMSF014E02+ TCGTAATCNAANGGAGGCNCCGAGGTGGCCGGTTTAATATCTTTATCCATTCCCNTTCT
JMFF027I12+ TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCTTTATCCATTCCCCTTCTT
JMSF041B05+ TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCTTTATCCATTCCCCTTCTT
                      ____________________________________________________________
consensus TCGTAATCAAAAGGAGGCACCGATGTGGCCGGTTTAATATCTTTATCCATTCCCCTTCTT
 
. : . : . : . : . : . :
JMFF027I12+ TACGTGAAGTATTGGAAGTGAAAAGTAGTGCGACGGCGAGCTAGAAGCCAGGGGAGTGGC
JMSF041B05+ TACGTGAAGTATTGGAAGTGAAAAGTAGTGCGACGGCGAGCTAGAAGCCAGGGGAGTGGC
                      ____________________________________________________________
consensus TACGTGAAGTATTGGAAGTGAAAAGTAGTGCGACGGCGAGCTAGAAGCCAGGGGAGTGGC
 
. : . : . : . : . : . :
JMFF027I12+ GTTCACGGAGCGAGAAAGAGGTAGAAATGGACAAAAAAGGGTTTGAGCGAAAACACGGCA
JMSF041B05+ GTTCACGGAGCGAGAAAGAGGTAGAAATGGACAAAAAAGGGTTTGAGCGAAAACACGGCA
                      ____________________________________________________________
consensus GTTCACGGAGCGAGAAAGAGGTAGAAATGGACAAAAAAGGGTTTGAGCGAAAACACGGCA
 
. : . : . : . : . : . :
JMFF027I12+ CCGAGGAAGAGTACAAAACGGGGGTCGGAGGAGTCACGGCCGTCCACTTCTCCGGAGCTC
JMSF041B05+ CCGAGGAAGAGTACAAAACGGGGGTCGGAGGAGTCACGGCCGTCCACTTCTCCGGAGCTC
                      ____________________________________________________________
consensus CCGAGGAAGAGTACAAAACGGGGGTCGGAGGAGTCACGGCCGTCCACTTCTCCGGAGCTC
 
. : . : . : . : . : . :
JMFF027I12+ GCCTTTGCCTTCACGCCGGTTCTCTTTCTTCTTTT
JMSF041B05+ GCCTTTGCCTTCACGCCGGTTCTCTTTCTTCTTTTGACTTTTCTACGTACGTTAAAGCTC
                      ____________________________________________________________
consensus GCCTTTGCCTTCACGCCGGTTCTCTTTCTTCTTTTGACTTTTCTACGTACGTTAAAGCTC