| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF009A08 | Sequence | 226 | 000908 (11) | 747 | 011455 (9) | ref|XP_009611847.1| | 1e-112 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF010A02 | Sequence | 212 | 000908 (11) | 745 | 011262 (2) | ref|XP_009611847.1| | 5e-67 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF013O15 | Sequence | 297 | 000908 (11) | 743 | 011455 (9) | ref|XP_009611847.1| | 8e-112 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF013P17 | Sequence | 250 | 000908 (11) | 765 | 011455 (9) | ref|XP_009611847.1| | 1e-107 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF016N24 | Sequence | 216 | 000908 (11) | 741 | 011455 (9) | ref|XP_009611847.1| | 1e-112 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF017B01 | Sequence | 223 | 000908 (11) | 748 | 011455 (9) | ref|XP_009611847.1| | 3e-113 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF018G20 | Sequence | 209 | 000908 (11) | 739 | 011455 (9) | ref|XP_009611847.1| | 1e-112 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF019D18 | Sequence | 254 | 000908 (11) | 768 | 011262 (2) | ref|XP_009611847.1| | 2e-73 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF028B01 | Sequence | 272 | 000908 (11) | 736 | 011455 (9) | ref|XP_009611847.1| | 3e-111 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF040M12 | Sequence | 327 | 000908 (11) | 856 | 011455 (9) | ref|XP_009611847.1| | 2e-137 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] | |||
| JMSF051K09 | Sequence | 258 | 000908 (11) | 746 | 001437 (7) | ref|XP_009624369.1| | 4e-63 | PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Nicotiana tome | |||
This contig is upended
. : . : . : . : . : . :
JMSF019D18+ CCN
____________________________________________________________
consensus CCN
. : . : . : . : . : . :
JMSF019D18+ TTTTTGAAANTTCCTTTGCNACCNACAAATNTCCCNCNAACCCAAAACCNAAAAAAAAAA
JMSF051K09+ TTTTTGAAANTTCCTTTGCNACCNACAAATGTCCCNCNAACCNAAAACCNAAAAAAAAAA
JMSF028B01+ AAAAAAAAA
JMSF017B01+ AAAAAAAAAA
JMSF016N24+ AAAAAAAAAA
JMSF010A02+ AAAACCNAAAAAAAAAA
JMSF018G20+ AAAAAAAAAA
JMSF013O15+ TTTTTGAAANTTCCTTTGCAACCNACAAATGTCCCNCNAACCNAAAACCNAAAAAAAAAA
JMSF013P17+ AAAAAAAAAA
JMSF040M12+ AAAAAAAAA
____________________________________________________________
consensus TTTTTGAAANTTCCTTTGCAACCNACAAATGTCCCNCNAACCCAAAACCNAAAAAAAAAA
. : . : . : . : . : . :
JMSF019D18+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF051K09+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF028B01+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF017B01+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF016N24+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF010A02+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF018G20+ AGAAATAACAACAAANCCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF013O15+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF013P17+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF009A08+ CAAANCCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF040M12+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
____________________________________________________________
consensus AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
. : . : . : . : . : . :
JMSF019D18+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF051K09+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF028B01+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF017B01+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF016N24+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF010A02+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF018G20+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTNGAAGATNTGATNTG
JMSF013O15+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF013P17+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF009A08+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF040M12+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
____________________________________________________________
consensus GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
. : . : . : . : . : . :
JMSF019D18+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF051K09+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF028B01+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF017B01+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF016N24+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF010A02+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF018G20+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF013O15+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF013P17+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF009A08+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF040M12+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
____________________________________________________________
consensus ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
. : . : . : . : . : . :
JMSF019D18+ GATATCTCAC
JMSF051K09+ GATATCTCACGAAGATTC
JMSF028B01+ GATATCTCAC
JMSF017B01+ GATATCTCACGAAGATTCC
JMSF016N24+ GATATCTCACGAAGATTCC
JMSF010A02+ GATATCTCAC
JMSF018G20+ GATATCTCACGAAGATTC
JMSF013O15+ GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCAC
JMSF013P17+ GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCAC
JMSF009A08+ GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCAC
JMSF040M12+ GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCACAATC
____________________________________________________________
consensus GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCACAATC