Contig 000908:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009A08Sequence226000908 (11)747011455 (9)ref|XP_009611847.1|1e-112PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF010A02Sequence212000908 (11)745011262 (2)ref|XP_009611847.1|5e-67PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF013O15Sequence297000908 (11)743011455 (9)ref|XP_009611847.1|8e-112PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF013P17Sequence250000908 (11)765011455 (9)ref|XP_009611847.1|1e-107PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF016N24Sequence216000908 (11)741011455 (9)ref|XP_009611847.1|1e-112PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF017B01Sequence223000908 (11)748011455 (9)ref|XP_009611847.1|3e-113PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF018G20Sequence209000908 (11)739011455 (9)ref|XP_009611847.1|1e-112PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF019D18Sequence254000908 (11)768011262 (2)ref|XP_009611847.1|2e-73PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF028B01Sequence272000908 (11)736011455 (9)ref|XP_009611847.1|3e-111PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF040M12Sequence327000908 (11)856011455 (9)ref|XP_009611847.1|2e-137PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF051K09Sequence258000908 (11)746001437 (7)ref|XP_009624369.1|4e-63PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Nicotiana tome

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF019D18+ CCN
                      ____________________________________________________________
consensus CCN
 
. : . : . : . : . : . :
JMSF019D18+ TTTTTGAAANTTCCTTTGCNACCNACAAATNTCCCNCNAACCCAAAACCNAAAAAAAAAA
JMSF051K09+ TTTTTGAAANTTCCTTTGCNACCNACAAATGTCCCNCNAACCNAAAACCNAAAAAAAAAA
JMSF028B01+ AAAAAAAAA
JMSF017B01+ AAAAAAAAAA
JMSF016N24+ AAAAAAAAAA
JMSF010A02+ AAAACCNAAAAAAAAAA
JMSF018G20+ AAAAAAAAAA
JMSF013O15+ TTTTTGAAANTTCCTTTGCAACCNACAAATGTCCCNCNAACCNAAAACCNAAAAAAAAAA
JMSF013P17+ AAAAAAAAAA
JMSF040M12+ AAAAAAAAA
                      ____________________________________________________________
consensus TTTTTGAAANTTCCTTTGCAACCNACAAATGTCCCNCNAACCCAAAACCNAAAAAAAAAA
 
. : . : . : . : . : . :
JMSF019D18+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF051K09+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF028B01+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF017B01+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF016N24+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF010A02+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF018G20+ AGAAATAACAACAAANCCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF013O15+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF013P17+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF009A08+ CAAANCCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
JMSF040M12+ AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
                      ____________________________________________________________
consensus AGAAATAACAACAAAACCAAAAAAGCCGCACGCAGCGCACTATCAGATTCAAGCACGAGG
 
. : . : . : . : . : . :
JMSF019D18+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF051K09+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF028B01+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF017B01+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF016N24+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF010A02+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF018G20+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTNGAAGATNTGATNTG
JMSF013O15+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF013P17+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF009A08+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
JMSF040M12+ GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
                      ____________________________________________________________
consensus GGAATTGACGGAGGGATTTGGCCTTATAATTTAGAGATGGAGATTAGAAGATTTGATTTG
 
. : . : . : . : . : . :
JMSF019D18+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF051K09+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF028B01+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF017B01+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF016N24+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF010A02+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF018G20+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF013O15+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF013P17+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF009A08+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
JMSF040M12+ ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
                      ____________________________________________________________
consensus ATTTGATTTGATGGAGGAAGCGAGGAGAATACATGAGAGAGAGTTGACGGTGGTGGTTTG
 
. : . : . : . : . : . :
JMSF019D18+ GATATCTCAC
JMSF051K09+ GATATCTCACGAAGATTC
JMSF028B01+ GATATCTCAC
JMSF017B01+ GATATCTCACGAAGATTCC
JMSF016N24+ GATATCTCACGAAGATTCC
JMSF010A02+ GATATCTCAC
JMSF018G20+ GATATCTCACGAAGATTC
JMSF013O15+ GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCAC
JMSF013P17+ GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCAC
JMSF009A08+ GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCAC
JMSF040M12+ GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCACAATC
                      ____________________________________________________________
consensus GATATCTCACGAAGATTCCATTATTTCTGAAGCTGTGCGGCTTTTGTGAAGTGCACAATC