| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS079H07 | Sequence | 626 | 000907 (6) | ref|XP_011096539.1| | 3e-111 | PREDICTED: uncharacterized protein At2g34460, chloroplastic [Sesamum indicum] | |||||
| JMSF015J13 | Sequence | 565 | 000907 (6) | ref|XP_011096539.1| | 1e-77 | PREDICTED: uncharacterized protein At2g34460, chloroplastic [Sesamum indicum] | |||||
| JMSF028B14 | Sequence | 639 | 000907 (6) | ref|XP_011096539.1| | 2e-95 | PREDICTED: uncharacterized protein At2g34460, chloroplastic [Sesamum indicum] | 789 | 000907 (6) | ref|XP_011096539.1| | 2e-130 | PREDICTED: uncharacterized protein At2g34460, chloroplastic [Sesamum indicum] |
| JMSF040M02 | Sequence | 639 | 000907 (6) | ref|XP_011096539.1| | 3e-95 | PREDICTED: uncharacterized protein At2g34460, chloroplastic [Sesamum indicum] | 871 | 000907 (6) | ref|XP_011096539.1| | 2e-152 | PREDICTED: uncharacterized protein At2g34460, chloroplastic [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF028B14- GTTTCAGGTGAA
____________________________________________________________
consensus GTTTCAGGTGAA
. : . : . : . : . : . :
rJMSF028B14- AAATATAATGTATACATAGGTAGTTGAAACTGCCATCAAGGGGGAATGAAAGGATAAACA
rJMSF040M02- GCCATCAAGGGGGAATGAAAGGATAAACA
____________________________________________________________
consensus AAATATAATGTATACATAGGTAGTTGAAACTGCCATCAAGGGGGAATGAAAGGATAAACA
. : . : . : . : . : . :
rJMSF028B14- GTTGTATTATGGCGTACGGTGGTAACAGAAAGTTGGACACAAGTGAGCAAGTTACCGTGG
rJMSF040M02- GTTGTATTATGGCGTACGGTGGTAACAGAAAGTTGGACACAAGTGAGCAAGTTACCGTGG
____________________________________________________________
consensus GTTGTATTATGGCGTACGGTGGTAACAGAAAGTTGGACACAAGTGAGCAAGTTACCGTGG
. : . : . : . : . : . :
rJMSF028B14- TTTTATAGAAGCAAAAAGTTCCTTGAACGAACGCTTAGGGGCTTCGGTTCTAGCAACTAT
rJMSF040M02- TTTTATAGAAGCAAAAAGTTCCTTGAACGAACGCTTAGGGGCTTCGGTTCTAGCAACTAT
____________________________________________________________
consensus TTTTATAGAAGCAAAAAGTTCCTTGAACGAACGCTTAGGGGCTTCGGTTCTAGCAACTAT
. : . : . : . : . : . :
rJMSF028B14- CTCCACCAATTTGTAGTGAGATTCTGGATGGAGCAACGCCTCGACTGCAACTTCAGCAAC
rJMSF040M02- CTCCACCACTTTGTAGTGAGATTCTGGATGGAGCAACGCCTCGACTGCAACTTCAGCAAC
____________________________________________________________
consensus CTCCACCACTTTGTAGTGAGATTCTGGATGGAGCAACGCCTCGACTGCAACTTCAGCAAC
. : . : . : . : . : . :
rJMSF028B14- CTGATCTCTAGATATAGCACCTCCAGAAAGTGTATCCTCTGGCTCCATGACTATGTTTCC
rJMSF040M02- CTGATCTCTAGATATAGCACCTCCAGAAAGTGTATCCTCTGGCTCCATGACTATGTTTCC
____________________________________________________________
consensus CTGATCTCTAGATATAGCACCTCCAGAAAGTGTATCCTCTGGCTCCATGACTATGTTTCC
. : . : . : . : . : . :
rJMSF028B14- ATTTGGAGGATCATTTCTCAGTCCACCAGGCCTTATGATTGTGTAATTGATCCCCGACCT
rJMSF040M02- ATTTGGAGGATCATTTCTCAGTCCACCAGGCCTTATGATTGTGTAATTGATCCCCGACCT
JMFS079H07+ CTCAGTCCACCAGGCCTTATGATTGTGTAATTGATCNCCGACCT
____________________________________________________________
consensus ATTTGGAGGATCATTTCTCAGTCCACCAGGCCTTATGATTGTGTAATTGATCCCCGACCT
. : . : . : . : . : . :
rJMSF028B14- CCTTATGTACTGCTCTGCTTGAAGCTTCGCGATCAATGTCAGTCCAAACACATTAAGAAT
rJMSF040M02- CCTTATGTACTGCTCTGCTTGAAGCTTCGCGATCAATGTCAGTCCAAACACATTAAGAAT
JMFS079H07+ CCTTATGTACTGCTCTGCTTGAAGCTTCGCGATCAATGTCAGTCCAAACACATTAAGAAT
JMSF028B14+ AAGCTTCGCGATCAATGTCAGTCCAAACACATTAAGAAT
JMSF040M02+ AAGCTTCGCGATCAATGTCAGTCCAAACACATTAAGAAT
____________________________________________________________
consensus CCTTATGTACTGCTCTGCTTGAAGCTTCGCGATCAATGTCAGTCCAAACACATTAAGAAT
. : . : . : . : . : . :
rJMSF028B14- TATGTAGGATGGATTAAACAACTGTCCCATTGCAGCTCCATTGACTAGGATAGAGCTTAT
rJMSF040M02- TATGTAGGATGGATTAAACAACTGTCCCATTGCAGCTCCATTGACTAGGATAGAGCTTAT
JMFS079H07+ TATGTAGGATGGATTAAACAACTGTCCCATTGCAGCTCCATTGACTAGGATAGAGCTTAT
JMSF028B14+ TATGTAGGATGGATTAAACAACTGTCCCATTGCAGCTCCATTGACTAGGATAGAGCTTAT
JMSF015J13+ CTCCATTGACTAGGATAGAGCTTAT
JMSF040M02+ TATGTAGGATGGATTAAACAACTGTCCCATTGCAGCTCCATTGACTAGGATAGAGCTTAT
____________________________________________________________
consensus TATGTAGGATGGATTAAACAACTGTCCCATTGCAGCTCCATTGACTAGGATAGAGCTTAT
. : . : . : . : . : . :
rJMSF028B14- AAGGATAAACCTATTAACGCCTTGTTTTCTGCATGCATCAACGAGGTTTACGGTGCCAAA
rJMSF040M02- AAGGATAAACCTATTAACGCCTTGTTTTCTGCATGCATCAACGAGGTTTACGGTGCCAAA
JMFS079H07+ AAGGATAAACCTATTAACGCCTTGTTTTCTGCATGCATCAACGAGGTTTACGGTGCCAAA
JMSF028B14+ AAGGATAAACCTATTAACGCCTTGTTTTCTGCATGCATCAACGAGGTTTACGGTGCCAAA
JMSF015J13+ AAGGATAAACCTATTAACGCCTTGTTTTCTGCATGCATCAACGAGGTTTACGGTGCCAAA
JMSF040M02+ AAGGATAAACCTATTAACGCCTTGTTTTCTGCATGCATCAACGAGGTTTACGGTGCCAAA
____________________________________________________________
consensus AAGGATAAACCTATTAACGCCTTGTTTTCTGCATGCATCAACGAGGTTTACGGTGCCAAA
. : . : . : . : . : . :
rJMSF028B14- GTTATCCACCTTCCATGGAGCCAATAAATCCCATGAAGGCCGAAATCCAGCTGCACATAT
rJMSF040M02- GTTATCCACCTTCCATGGAGCCAATAAATCCCATGAAGGCCGAAATCCAGCTGCACATAT
JMFS079H07+ GTTATCCACCTTCCATGGAGCCAATAAATCCCATGAAGGCCGAAATCCAGCTGCACATAT
JMSF028B14+ GTTATCCACCTTCCATGGAGCCAATAAATCCCATGAAGGCCGAAATCCAGCTGCACATAT
JMSF015J13+ GTTATCCACCTTCCATGGAGCCAATAAATCCCATGAAGGCCGAAATCCAGCTGCACATAT
JMSF040M02+ GTTATCCACCTTCCATGGAGCCAATAAATCCCATGAAGGCCGAAATCCAGCTGCACATAT
____________________________________________________________
consensus GTTATCCACCTTCCATGGAGCCAATAAATCCCATGAAGGCCGAAATCCAGCTGCACATAT
. : . : . : . : . : . :
rJMSF028B14- CACTGCATCTGAATCTTCACCTATGGCATCACCTAATTTAGTAGCTCCCTCTGTTACATC
rJMSF040M02- CACTGCATCTGAATCTTCACCTATGGCATCACCTAATTTAGTAGCTCCCTCTGTTACATC
JMFS079H07+ CACTGCATCTGAATCTTCACCTATGGCATCACCTAATTTAGTAGCTCCCTCTGTTACATC
JMSF028B14+ CACTGCATCTGAATCTTCACCTATGGCATCACCTAATTTAGTAGCTCCCTCTGTTACATC
JMSF015J13+ CACTGCATCTGAATCTTCACCTATGGCATCACCTAATTTAGTAGCTCCCTCTGTTACATC
JMSF040M02+ CACTGCATCTGAATCTTCACCTATGGCATCACCTAATTTAGTAGCTCCCTCTGTTACATC
____________________________________________________________
consensus CACTGCATCTGAATCTTCACCTATGGCATCACCTAATTTAGTAGCTCCCTCTGTTACATC
. : . : . : . : . : . :
rJMSF028B14- AGCTTTTACAATTTGAAGATGAGGGTTTCCGCCGGGTAAGCTTGTTTTGGCCTTATCTAC
rJMSF040M02- AGCTTTTACAATTTGAAGATGAGGGTTTCCGCCGGGTAAGCTTGTTTTGGCCTTATCTAC
JMFS079H07+ AGCTTTTACAATTTGAAGATGAGGGTTTCCGCCGGGTAAGCTTGTTTTGGCCTTATCTAC
JMSF028B14+ AGCTTTTACAATTTGAAGATGAGGGTTTCCGCCGGGTAAGCTTGTTTTGGCCTTATCTAC
JMSF015J13+ AGCTTTTACAATTTGAAGATGAGGGTTTCCGCCGGGTAAGCTTGTTTTGGCCTTATCTAC
JMSF040M02+ AGCTTTTACAATTTGAAGATGAGGGTTTCCGCCGGGTAAGCTTGTTTTGGCCTTATCTAC
____________________________________________________________
consensus AGCTTTTACAATTTGAAGATGAGGGTTTCCGCCGGGTAAGCTTGTTTTGGCCTTATCTAC
. : . : . : . : . : . :
rJMSF028B14- ATCGCGAACGCCTGCCTTAACAGCAAACCCCTTTGTCANAAGCTGT
rJMSF040M02- ATCGCGAACGCCTGCCTTAACAGCAAACCCCTTTGTCAGAAGCTGTTCAACTATCCTCTT
JMFS079H07+ ATCGCGAACGCCTGCCTTAACAGCAAACCCCTTTGTCAGAAGCTGTTCAACTATCCTCTT
JMSF028B14+ ATCGCGAACGCCTGCCTTAACAGCAAACCCCTTTGTCAGAAGCTGTTCAACTATCCTCTT
JMSF015J13+ ATCGCGAACGCCTGCCTTAACAGCAAACCCCTTTGTCAGAAGCTGTTCAACTATCCTCTT
JMSF040M02+ ATCGCGAACGCCTGCCTTAACAGCAAACCCCTTTGTCAGAAGCTGTTCAACTATCCTCTT
____________________________________________________________
consensus ATCGCGAACGCCTGCCTTAACAGCAAACCCCTTTGTCAGAAGCTGTTCAACTATCCTCTT
. : . : . : . : . : . :
rJMSF040M02- GCCGGTGTTCCCAGTAGCACCTGCTACAAATATCTTCTTCTTCTTCTGGCCACTACCCGC
JMFS079H07+ GCCGGTGTTCCCAGTAGCACCTGCTACAAATATCTTCTTCTTCTTCTGGCTACTACCCGC
JMSF028B14+ GCCGGTGTTCCCAGTAGCACCTGCTACAAATATCTTCTTCTTCTTCTGGCTACTACCCGC
JMSF015J13+ GCCGGTGTTCCCAGTAGCACCTGCTACAAATATCTTCTTCTTCTTCTGGCTACTACCCGC
JMSF040M02+ GCCGGTGTTCCCAGTAGCACCTGCTACAAATATCTTCTTCTTCTTCTGGCCACTACCCGC
____________________________________________________________
consensus GCCGGTGTTCCCAGTAGCACCTGCTACAAATATCTTCTTCTTCTTCTGGCTACTACCCGC
. : . : . : . : . : . :
rJMSF040M02- TTCTTCTTCCACCTTCATTTCACTTCCCTCCATATTTGATGCTTTGAG
JMFS079H07+ TTCTTCTTCCACCTTCATTTCACTTCCCTCCATATTTGATGCTTTGAGAAGAAAGGAGCG
JMSF028B14+ TTCTTCTTCCACCTTCATTTCACTTCCCTCCATATTTGATGCTTTGAGAAGAAAGGAGCG
JMSF015J13+ TTCTTCTTCCACCTTCATTTCACTTCCCTCCATATTTGATGCTTTGAGAAGAAAGGAGCG
JMSF040M02+ TTCTTCTTCCACCTTCATTTCACTTCCCTCCATATTTGATGCTTTGAGAAGAAAGGAGCG
____________________________________________________________
consensus TTCTTCTTCCACCTTCATTTCACTTCCCTCCATATTTGATGCTTTGAGAAGAAAGGAGCG
. : . : . : . : . : . :
JMFS079H07+ GGAGCGGGATTTAGAAGGAAAGAGAGAGTGAGAGACTGAATT
JMSF028B14+ GGAGCGGGATTTAGAAGGAAAGAGAGAGTGAGAGACTGAATTAACAGTGAAGGAGGGGAA
JMSF015J13+ GGAGCGGGATTTAGAAGGAAAGAGAGAGTGAGAGACTGAATTAACAGTGAAGGAGGGGAA
JMSF040M02+ GGAGCGGGATTTAGAAGGAAAGAGAGAGTGAGAGACTGAATTAACAGTGAAGGAGGGGAA
____________________________________________________________
consensus GGAGCGGGATTTAGAAGGAAAGAGAGAGTGAGAGACTGAATTAACAGTGAAGGAGGGGAA
. : . : . : . : . : . :
JMSF028B14+ GATAGAGGTTCTGAGGGAGAAGAGACCAGAAGCTGCCATTCGCGGCCGACCAGACAA
JMSF015J13+ GATAGAGGTTCTGAGGGAGAAGAGACCAGAAGCTGCCATTCGCGGCCGACCAGACAA
JMSF040M02+ GATAGAGGTTCTGAGGGAGAAGAGACCAGAAGCTGCCATTCGCGGCCGACCAGACAACCC
____________________________________________________________
consensus GATAGAGGTTCTGAGGGAGAAGAGACCAGAAGCTGCCATTCGCGGCCGACCAGACAACCC