Contig 000906:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039G15Sequence687000906 (4)ref|XP_009596001.1|8e-68PREDICTED: uncharacterized protein At4g06598-like [Nicotiana tomentosiformis] r803007190 (4)ref|XP_003629951.1|2e-52Transcription factor bZIP63 [Medicago truncatula] gb|AET04427.1| bZIP transcript
JMSF040L14Sequence590000906 (4)ref|XP_010314642.1|2e-25PREDICTED: uncharacterized protein At4g06598 [Solanum lycopersicum]887007190 (4)ref|XP_003629952.1|9e-69Transcription factor bZIP63 [Medicago truncatula]
JMSF043P22Sequence738000906 (4)ref|XP_009596001.1|2e-67PREDICTED: uncharacterized protein At4g06598-like [Nicotiana tomentosiformis] r733007190 (4)ref|XP_011087712.1|2e-64PREDICTED: uncharacterized protein At4g06598-like [Sesamum indicum] ref|XP_01108
JMSF050N05Sequence681000906 (4)ref|XP_009596001.1|7e-62PREDICTED: uncharacterized protein At4g06598-like [Nicotiana tomentosiformis] r761007190 (4)ref|XP_011092330.1|1e-68PREDICTED: uncharacterized protein At4g06598-like [Sesamum indicum] ref|XP_01109

Alignment

This contig is upended


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JMSF039G15+                                                              GAGAAGGAA
JMSF043P22+                                                         TCTTGGAGAAGGAA
                      ____________________________________________________________
consensus                                                           TCTTGGAGAAGGAA
 
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JMSF039G15+           TGCCACGTGGGTGAGCGATTATGTTGGGAGATGCTGCCCGATTCTTGTGTTTGCTCGAAG
JMSF050N05+                                       AGATGCTGCCCGATTCTTGTGTTTGCTCGAAG
JMSF043P22+           TGCCACGTGGGTGAGCGATTATGTTGGGAGATGCTGCCCGATTCTTGTGTTTGCTCGAAG
                      ____________________________________________________________
consensus             TGCCACGTGGGTGAGCGATTATGTTGGGAGATGCTGCCCGATTCTTGTGTTTGCTCGAAG
 
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JMSF039G15+           CAATAGAATCTGCATAAAAAGCAGCATGCCGAGCATCTCTATGGAGATCAAATTCTTGGG
JMSF050N05+           CAATAGAATCTGCATAAAAAGCAGCATGCCGAGCATCTCTATGGAGATCAAATTCTTGGG
JMSF043P22+           CAATAGAATCTGCATAAAAAGCAGCATGCCGAGCATCTCTATGGAGATCAAATTCTTGGG
                      ____________________________________________________________
consensus             CAATAGAATCTGCATAAAAAGCAGCATGCCGAGCATCTCTATGGAGATCAAATTCTTGGG
 
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JMSF039G15+           TTCCCCAAGAAGGGTTAGGCAGTACGTTTCTAAACTTGCTATCATCTTGAACTAAGTAAT
JMSF050N05+           TTCCCCAAGAAGGGTTAGGCAGTACGTTTCTAAACTTGCTATCATCTTGAACTAAGTAAT
JMSF043P22+           TTCCCCAAGAAGGGTTAGGCAGTACGTTTCTAAACTTGCTATCATCTTGAACTAAGTAAT
                      ____________________________________________________________
consensus             TTCCCCAAGAAGGGTTAGGCAGTACGTTTCTAAACTTGCTATCATCTTGAACTAAGTAAT
 
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JMSF039G15+           CCATGTTTGAAACATTAGCGGCATCCAAATACGCAAACGAGTCACTAGACGAACGCCGAT
JMSF050N05+           CCATGTTTGAAACATTAGCGGCATCCAAATACGCAAACGAGTCACTAGACGAACGCCGAT
JMSF043P22+           CCATGTTTGAAACATTAGCGGCATCCAAATACGCAAACGAGTCACTAGACGAACGCCGAT
                      ____________________________________________________________
consensus             CCATGTTTGAAACATTAGCGGCATCCAAATACGCAAACGAGTCACTAGACGAACGCCGAT
 
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JMSF039G15+           GAGCTCCTCTACGCACGGGAGTGTCTGGCTCATTAAGAAGATCATCGAGCCAAGACGGCT
JMSF050N05+           GAGCTCCTCTACGCACGGGAGTGTCTGGCTCATTAAGAAGATCATCGAGCCAAGACGGCT
JMSF043P22+           GAGCTCCTCTACGCACGGGAGTGTCTGGCTCATTAAGAAGATCATCGAGCCAAGACGGCT
JMSF040L14+                     ACGCACGGGAGTGTCTGGCTCATTAAGAAGATCATCGAGCCAAGACGGCT
                      ____________________________________________________________
consensus             GAGCTCCTCTACGCACGGGAGTGTCTGGCTCATTAAGAAGATCATCGAGCCAAGACGGCT
 
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JMSF039G15+           GCTCCTCTATCAAAAAGCTCTCAGACGAAGTACGCATATGGTGCGAATTTAATTCCCTCG
JMSF050N05+           GCTCCTCTATCAAAAAGCTCTCAGACGAAGTACGCATATGGTGCGAATTTAATTCCCTCG
JMSF043P22+           GCTCCTCTATCAAAAAGCTCTCAGACGAAGTACGCATATGGTGCGAATTTAATTCCCTCG
JMSF040L14+           GCTCCTCTATCAAAAAGCTCTCAGACGAAGTACGCATATGGTGCGAATTTAATTCCCTCG
                      ____________________________________________________________
consensus             GCTCCTCTATCAAAAAGCTCTCAGACGAAGTACGCATATGGTGCGAATTTAATTCCCTCG
 
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JMSF039G15+           GCTTTGAAACACCCTTTTGTGTGATAGTCGGGACATAATCAATGTACGATGGGGATATGC
JMSF050N05+           GCTTTGAAACACCCTTTTGTGTGATAGTCGGGACATAATCAATGTACGATGGGGATATGC
JMSF043P22+           GCTTTGAAACACCCTTTTGTGTGATAGTCGGGACATAATCAATGTACGATGGGGATATGC
JMSF040L14+           GCTTTGAAACACCCTTTTGTGTGATAGTCGGGACATAATCAATGTACGATGGGGATATGC
                      ____________________________________________________________
consensus             GCTTTGAAACACCCTTTTGTGTGATAGTCGGGACATAATCAATGTACGATGGGGATATGC
 
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JMSF039G15+           TCGGAAATGGACTTTTAGGAGGCAGTAAAGAGTTCTTCCCATTGTACATCACATTTCTGA
JMSF050N05+           TCGGAAATGGACTTTTAGGAGGCAGTAAAGAGTTCTTCCCATTGTACATCACATTTCTGA
JMSF043P22+           TCGGAAATGGACTTTTAGGAGGCAGTAAAGAGTTCTTCCCATTGTACATCACATTTCTGA
JMSF040L14+           TCGGAAATGGACTTTTAGGAGGCAGTAAAGAGTTCTTCCCATTGTACATCACATTTCTGA
                      ____________________________________________________________
consensus             TCGGAAATGGACTTTTAGGAGGCAGTAAAGAGTTCTTCCCATTGTACATCACATTTCTGA
 
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JMSF039G15+           CACTAGATGGCCCCTTAGAGTTTGCCATATAAACACAAACAATTCCTAAACAAATCGCAG
JMSF050N05+           CACTAGATGGCCCCTTAGAGTTTGCCATATAAACACAAACAATTCCTAAACAAATCGCAG
JMSF043P22+           CACTAGATGGCCCCTTAGAGTTTGCCATATAAACACAAACAATTCCTAAACAAATCGCAG
JMSF040L14+           CACTAGATGGCCCCTTAGAGTTTGCCATATAAACACAAACAATTCCTAAACAAATCGCAG
                      ____________________________________________________________
consensus             CACTAGATGGCCCCTTAGAGTTTGCCATATAAACACAAACAATTCCTAAACAAATCGCAG
 
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JMSF039G15+           AGAATTGGCTTCGATCAAAAATGTAAATCTTCCCCTGATTGCGATCTCAGCAATGTGAAC
JMSF050N05+           AGAATTGGCTTCGATCAAAAATGTAAATCTTCCCCTGATTGCGATCTCAGCAATGTGAAC
JMSF043P22+           AGAATTGGCTTCGATCAAAAATGTAAATCTTCCCCTGATTGCGATCTCAGCAATGTGAAC
JMSF040L14+           AGAATTGGCTTCGATCAAAAATGTAAATCTTCCCCTGATTGCGATCTCAGCAATGTGAAC
                      ____________________________________________________________
consensus             AGAATTGGCTTCGATCAAAAATGTAAATCTTCCCCTGATTGCGATCTCAGCAATGTGAAC
 
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JMSF039G15+           CCAATTAAAAAAAATTGAAAATTCCGCAAAATCTAAAAGCTCAAAGGGCTCTCTTCCTCC
JMSF050N05+           CCAATTAAAAAAAATTGAAAATTCCGCAAAATCTAAAAGCTCAAAGGGCTCTCTTCCTCC
JMSF043P22+           CCAATTAAAAAAAATTGAAAATTCCGCAAAATCTAAAAGCTCAAAGGGCTCTCTTCCTCC
JMSF040L14+           CCAATTAAAAAAAATTGAAAATTCCGCAAAATCTAAAAGCTCAAAGGGCTCTCTTCCTCC
                      ____________________________________________________________
consensus             CCAATTAAAAAAAATTGAAAATTCCGCAAAATCTAAAAGCTCAAAGGGCTCTCTTCCTCC
 
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JMSF039G15+           CCGGTTCTTCTGCTCT                                            
JMSF050N05+           CCGGTTCTTCTGCTCTGCTCTTCTCAGTGTCGACTCTTCCTCGTTGAC            
JMSF043P22+           CCGGTTCTTCTGCTCTGCTCTTCTCAGTGTCGACTCTTCCTCGTTGACATAGAAACTGTT
JMSF040L14+           CCGGTTCTTCTGCTCTGCTCTTCTCAGTGTCGACTCTTCCTCGTTGACATAGAAACTGTT
                      ____________________________________________________________
consensus             CCGGTTCTTCTGCTCTGCTCTTCTCAGTGTCGACTCTTCCTCGTTGACATAGAAACTGTT
 
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JMSF043P22+           G                                                           
JMSF040L14+           GACGGGACCAAACCGATATGTTTTTGGAAATTTATGTTTTTCACGATCTGACCCCTGAAA
                      ____________________________________________________________
consensus             GACGGGACCAAACCGATATGTTTTTGGAAATTTATGTTTTTCACGATCTGACCCCTGAAA
 
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JMSF040L14+           TTCTTTGATATCTGCGAAATCCCCGTACTGTGTTTTCCCTTTTTTTTTCCCAATAGAATC
                      ____________________________________________________________
consensus             TTCTTTGATATCTGCGAAATCCCCGTACTGTGTTTTCCCTTTTTTTTTCCCAATAGAATC