Contig 000905:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015D10Sequence213000905 (3)ref|XP_010316635.1|8e-09PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11811011286 (3)ref|XP_009757564.1|7e-84PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [
JMSF022B13Sequence664000905 (3)ref|XP_009768622.1|1e-82PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11781011286 (3)ref|XP_009757564.1|1e-84PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [
JMSF040I03Sequence680000905 (3)ref|XP_009768622.1|2e-77PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11838011286 (3)ref|XP_009757564.1|1e-93PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [

Alignment

This contig is upended


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JMSF022B13+              CCATGGACCGGTTCTCCAAACCCGGACCGGACCCCGGTTCAGAAACACCTGTGGCGT
JMSF040I03+                                                   TTCAGAAACACCTGTGGCGT
                      ____________________________________________________________
consensus                CCATGGACCGGTTCTCCAAACCCGGACCGGACCCCGGTTCAGAAACACCTGTGGCGT
 
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JMSF022B13+           CCCGTTCACCTCCATTTTGAATTCATACTCACCGGTCCCCGGATCGCCCGGCGACTTCCA
JMSF040I03+           CCCGTTCACCTCCATTTTGAATTCATACTCACCGGTCCCCGGATCGCCCGGCGACTTCCA
                      ____________________________________________________________
consensus             CCCGTTCACCTCCATTTTGAATTCATACTCACCGGTCCCCGGATCGCCCGGCGACTTCCA
 
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JMSF022B13+           CGACGTAAGATGCCGGTTCAGACCGGTTTTCTTGTCCACCCCAAACTTCATGAAAGGAAG
JMSF040I03+           CGACGTAAGATGCCGGTTCAGACCGGTTTTCTTGTCCACCCCAAACTTCATGAAAGGAAG
                      ____________________________________________________________
consensus             CGACGTAAGATGCCGGTTCAGACCGGTTTTCTTGTCCACCCCAAACTTCATGAAAGGAAG
 
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JMSF022B13+           TAAAGTATTTGTGGGATAATCAAAGCTCTGCCAATTTATACTCCGCCTATCCCGGAACAA
JMSF040I03+           TAAAGTATTTGTGGGATAATCAAAGCTCTGCCAATTTATACTCCGCCTATCCCGGAACAA
                      ____________________________________________________________
consensus             TAAAGTATTTGTGGGATAATCAAAGCTCTGCCAATTTATACTCCGCCTATCCCGGAACAA
 
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JMSF022B13+           AACCAGGTTCCCGGTATCCTGAAGCTGAGCAGAATAAGCTTTTATCCCCGTCACCGGAGA
JMSF040I03+           AACCAGGTTCCCGGTATCCTGAAGCTGAGCAGAATAAGCTTTTATCCCCGTCACCGGAGA
                      ____________________________________________________________
consensus             AACCAGGTTCCCGGTATCCTGAAGCTGAGCAGAATAAGCTTTTATCCCCGTCACCGGAGA
 
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JMSF022B13+           AGAAAGACTGGTGTTCCAGACAGAAACATTGGTTTTCTTGTCTTGGATGACAAGATTTCC
JMSF040I03+           AGAAAGACTGGTGTTCCAGACAGAAACATTGGTTTTCTTGTCTTGGATGACAAGATTTCC
                      ____________________________________________________________
consensus             AGAAAGACTGGTGTTCCAGACAGAAACATTGGTTTTCTTGTCTTGGATGACAAGATTTCC
 
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JMSF022B13+           GGTGGCATCAATGAAGAGGATCCCGGATGTGCCGTTAACAGGGCTGTCTCTGTTAGCAAC
JMSF040I03+           GGTGGCATCAATGAAGAGGATCCCGGATGTGCCGTTAACAGGGCTGTCTCTGTTAGCAAC
                      ____________________________________________________________
consensus             GGTGGCATCAATGAAGAGGATCCCGGATGTGCCGTTAACAGGGCTGTCTCTGTTAGCAAC
 
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JMSF022B13+           CCAAACAACTGTTTGTTCAGGGATTCTCTGGTACCAAATTCCGACATATCGCCGGCCGGA
JMSF015D10+                                                    CGACATATCGCCGGCCGGA
JMSF040I03+           CCAAACAACTGTTTGTTCAGGGATTCTCTGGTACCAAATTCCGACATATCGCCGGCCGGA
                      ____________________________________________________________
consensus             CCAAACAACTGTTTGTTCAGGGATTCTCTGGTACCAAATTCCGACATATCGCCGGCCGGA
 
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JMSF022B13+           AGAATTTTCCGGTGCAAAGAAACCAAGAACGAAAGACTTTTCACCGGAGATTAATAAATC
JMSF015D10+           AGAATTTTCCGGTGCAAAGAAACCAAGAACGAAAGACTTTTCACCGGAGATTAATAAATC
JMSF040I03+           AGAATTTTCCGGTGCAAAGAAACCAAGAACGAAAGACTTTTCACCGGAGATTAATAAATC
                      ____________________________________________________________
consensus             AGAATTTTCCGGTGCAAAGAAACCAAGAACGAAAGACTTTTCACCGGAGATTAATAAATC
 
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JMSF022B13+           CCCATCTTTGAGTGTTTGGTTGAAGGCGATGGTGTCCGTAAGACCGTACAGGGAAGATAC
JMSF015D10+           CCCATCTTTGAGTGTTTGGTTGAAGGCGATGGTGTCCGTAAGACCGTACAGGGAAGATAC
JMSF040I03+           CCCATCTTTGAGTGTTTGGTTGAAGGCGATGGTGTCCGTAAGACCGTACAGGGAAGATAC
                      ____________________________________________________________
consensus             CCCATCTTTGAGTGTTTGGTTGAAGGCGATGGTGTCCGTAAGACCGTACAGGGAAGATAC
 
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JMSF022B13+           AAGAAACGAGAGAATTACTGCAAATAATAGGTTTATTGTGGACGACATCTCTGTCTGTCT
JMSF015D10+           AAGAAACGAGAGAATTACTGCAAATAATAGGTTTATTGTGGACGACATCTCTGTCTGTCT
JMSF040I03+           AAGAAACGAGAGAATTACTGCAAATAATAGGTTTATTGTGGACGACATCTCTGTCTGTCT
                      ____________________________________________________________
consensus             AAGAAACGAGAGAATTACTGCAAATAATAGGTTTATTGTGGACGACATCTCTGTCTGTCT
 
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JMSF022B13+           TCCCAT                                                      
JMSF015D10+           TCCCAT                                                      
JMSF040I03+           TCCCATATTTTTCAGATTGCTTTCTCTCCAGTTTTAATTAAGTCGATACAGCTAGCCTCA
                      ____________________________________________________________
consensus             TCCCATATTTTTCAGATTGCTTTCTCTCCAGTTTTAATTAAGTCGATACAGCTAGCCTCA