Contig 000898:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039N05Sequence686000898 (2)ref|XP_009612154.1|3e-20PREDICTED: uncharacterized protein LOC104105528 isoform X2 [Nicotiana tomentosi820004346 (2)ref|XP_006344738.1|3e-120PREDICTED: uncharacterized protein LOC102598801 isoform X3 [Solanum tuberosum]
JMSF039O21Sequence677000898 (2)ref|XP_009612154.1|7e-19PREDICTED: uncharacterized protein LOC104105528 isoform X2 [Nicotiana tomentosi767004346 (2)ref|XP_006344738.1|2e-90PREDICTED: uncharacterized protein LOC102598801 isoform X3 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF039N05+                                   CATAGAGGCATGAGCAGCAAAAACAGCGGGCCCAGG
JMSF039O21+                                                      AAAACAGCGGGCCCAGG
                      ____________________________________________________________
consensus                                     CATAGAGGCATGAGCAGCAAAAACAGCGGGCCCAGG
 
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JMSF039N05+           TTGAGGACCATTGTATAAAACTTGAACCACTACTTGTTGTAGAGCTCGAAATTTAGTAGT
JMSF039O21+           TTGAGGACCATTGTATAAAACTTGAACCACTACTTGTTGTAGAGCTCGAAATTTAGTAGT
                      ____________________________________________________________
consensus             TTGAGGACCATTGTATAAAACTTGAACCACTACTTGTTGTAGAGCTCGAAATTTAGTAGT
 
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JMSF039N05+           CGCCTTGCATGTTCCACAAACATAGCATTCCTTCAACAGGTATAGAAAAACCACTGGAGA
JMSF039O21+           CGCCTTGCATGTTCCACAAACATAGCATTCCTTCAACAGGTATAGAAAAACCACTGGAGA
                      ____________________________________________________________
consensus             CGCCTTGCATGTTCCACAAACATAGCATTCCTTCAACAGGTATAGAAAAACCACTGGAGA
 
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JMSF039N05+           AACATGAGACAGATCATTGAAGGAATGTTTTGACAAATACAAAGGTTGATTTTTCTTCTT
JMSF039O21+           AACATGAGACAGATCATTGAAGGAATGTTTTGACAAATACAAAGGTTGATTTTTCTTCTT
                      ____________________________________________________________
consensus             AACATGAGACAGATCATTGAAGGAATGTTTTGACAAATACAAAGGTTGATTTTTCTTCTT
 
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JMSF039N05+           GTTAAGTCGGCCATCATCTCCCTTGTCCACCCACATGGTTAAGTACTAAAGCCAGAGGAT
JMSF039O21+           GTTAAGTCGGCCATCATCTCTCTTGTCCACCCACATGGTTAAGTACTAAAGCCAGAGGAT
                      ____________________________________________________________
consensus             GTTAAGTCGGCCATCATCTCTCTTGTCCACCCACATGGTTAAGTACTAAAGCCAGAGGAT
 
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JMSF039N05+           GAGAAAACTATTCTATTTATCTCTGATCTTTACAGCAATGTTTGAAGAGAACTTCCCAAA
JMSF039O21+           GAGAAAACTATTCTATTTATCTCTGATCTTTACAGCAATGTTTGAAGAGAACTTCCCAAA
                      ____________________________________________________________
consensus             GAGAAAACTATTCTATTTATCTCTGATCTTTACAGCAATGTTTGAAGAGAACTTCCCAAA
 
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JMSF039N05+           GTTGAACAAATTCACCCACCACCTAACCAAAAAAAACAGTGTACACGATTTTTGCAGAGT
JMSF039O21+           GTTGAACAAATTCACCCACCACCTAACCAAAAAAAACAGTGTACACGATTTTTGCAGAGT
                      ____________________________________________________________
consensus             GTTGAACAAATTCACCCACCACCTAACCAAAAAAAACAGTGTACACGATTTTTGCAGAGT
 
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JMSF039N05+           TTGAAACGCGAAAAAACAAAAGATCAGAAAGCTGCAGAGTCCCTGACTCACACGCTCCAA
JMSF039O21+           TTGAAACGCGAAAAAACAAAAGATCAGAAAGCTGCAGAGTCCCTGACTCACACGCTCCAA
                      ____________________________________________________________
consensus             TTGAAACGCGAAAAAACAAAAGATCAGAAAGCTGCAGAGTCCCTGACTCACACGCTCCAA
 
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JMSF039N05+           CAATGGCGATCTTCTGGCTCTAGGCAACGGAGAGAATGTATAATCCGTAGGCGTGCTTGT
JMSF039O21+           CAATGGCGATCTTCTGGCTCTAGGCAACGGAGAGAATGTATAATCCGTAGGCGTGCTTGT
                      ____________________________________________________________
consensus             CAATGGCGATCTTCTGGCTCTAGGCAACGGAGAGAATGTATAATCCGTAGGCGTGCTTGT
 
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JMSF039N05+           GTTTGTGGCATGAGTAAATTGAGTTTTTGTTCGGATATGAAATAGAGTTAAGAATTAGTT
JMSF039O21+           GTTTGTGGCATGAGTAAATTGAGTTTTTGTTCGGATATGAAATAGAGTTAAGAATTAGTT
                      ____________________________________________________________
consensus             GTTTGTGGCATGAGTAAATTGAGTTTTTGTTCGGATATGAAATAGAGTTAAGAATTAGTT
 
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JMSF039N05+           GCAGAATATTAGGCCAAAAAATCAGAAGAAATTATAAACCCTAGGAGGGAAGAAGCCAAA
JMSF039O21+           GCAGAATATTAGGCCAAAAAATCAGAAGAAATTATAAACCCTAGGAGGGAAGAAGCCAAA
                      ____________________________________________________________
consensus             GCAGAATATTAGGCCAAAAAATCAGAAGAAATTATAAACCCTAGGAGGGAAGAAGCCAAA
 
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JMSF039N05+           AGCTTTTGCTTAGGCAGAAATGGCTGTGGCTATTTTCCCTCTCGCTAAC           
JMSF039O21+           AGCTTTTGCTTAGGCAGAAATGGCTGTGGCTATTTTCCCTCTCGCTAACTCCCTCCCTCC
                      ____________________________________________________________
consensus             AGCTTTTGCTTAGGCAGAAATGGCTGTGGCTATTTTCCCTCTCGCTAACTCCCTCCCTCC