Contig 000892:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS050H05Sequence532000892 (4)gb|AAS79594.1|5e-94putative DNA repair protein [Ipomoea trifida] dbj|BAF36331.1| hypothetical prote
JMSF025K05Sequence531000892 (4)gb|AAS79594.1|5e-54putative DNA repair protein [Ipomoea trifida] dbj|BAF36331.1| hypothetical prote750005810 (3)gb|AAS79594.1|1e-103putative DNA repair protein [Ipomoea trifida] dbj|BAF36331.1| hypothetical prote
JMSF038O04Sequence552000892 (4)gb|AAS79594.1|1e-54putative DNA repair protein [Ipomoea trifida] dbj|BAF36331.1| hypothetical prote911005810 (3)gb|AAS79594.1|2e-114putative DNA repair protein [Ipomoea trifida] dbj|BAF36331.1| hypothetical prote
JMSF045F10Sequence672000892 (4)gb|AAS79594.1|5e-66putative DNA repair protein [Ipomoea trifida] dbj|BAF36331.1| hypothetical prote840005810 (3)gb|AAS79594.1|8e-124putative DNA repair protein [Ipomoea trifida] dbj|BAF36331.1| hypothetical prote

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS050H05+ TTTTGAATTTATAACATTGCAATGGTGAAGTATT
                      ____________________________________________________________
consensus TTTTGAATTTATAACATTGCAATGGTGAAGTATT
 
. : . : . : . : . : . :
JMFS050H05+ AATGCCAGAACTGTTCTCTTCAATCAAACGACGCTTCTTCATGTAAAGATCGCCTGGAGT
                      ____________________________________________________________
consensus AATGCCAGAACTGTTCTCTTCAATCAAACGACGCTTCTTCATGTAAAGATCGCCTGGAGT
 
. : . : . : . : . : . :
JMFS050H05+ AAACTCTGCCTTCTGGAAAGGCGTAAGTCGTAGCAATCGAAACAATGTTGGAAGGGGATA
                      ____________________________________________________________
consensus AAACTCTGCCTTCTGGAAAGGCGTAAGTCGTAGCAATCGAAACAATGTTGGAAGGGGATA
 
. : . : . : . : . : . :
JMFS050H05+ AACAATTGATTCATCTGTGGAATTGTTGGTAGCCACCTTGAGGAGGGTCTTATGGCTTTT
                      ____________________________________________________________
consensus AACAATTGATTCATCTGTGGAATTGTTGGTAGCCACCTTGAGGAGGGTCTTATGGCTTTT
 
. : . : . : . : . : . :
JMFS050H05+ ACGGAACATGGAACTGTTAATATACACACTGACTGACAAAACTACCGTGTCCATAATCCC
                      ____________________________________________________________
consensus ACGGAACATGGAACTGTTAATATACACACTGACTGACAAAACTACCGTGTCCATAATCCC
 
. : . : . : . : . : . :
JMFS050H05+ CAATACGTTAGGAGCAGATTTACAATATCCTTCAACCCTAACCTTCTTTTCCCTCACAAG
                      ____________________________________________________________
consensus CAATACGTTAGGAGCAGATTTACAATATCCTTCAACCCTAACCTTCTTTTCCCTCACAAG
 
. : . : . : . : . : . :
JMFS050H05+ TGGCAAGAGACATCGAGCCCATTCGTTTGGAATTCTTCCAATCTCTCCAAGTGCCTTTGA
                      ____________________________________________________________
consensus TGGCAAGAGACATCGAGCCCATTCGTTTGGAATTCTTCCAATCTCTCCAAGTGCCTTTGA
 
. : . : . : . : . : . :
JMFS050H05+ AGAGAACCGCACAATTTCAGAACAAGCAACCACCTGTCGACCTCGGCCAAATTTCGCCAA
JMSF045F10+ CCAA
                      ____________________________________________________________
consensus AGAGAACCGCACAATTTCAGAACAAGCAACCACCTGTCGACCTCGGCCAAATTTCGCCAA
 
. : . : . : . : . : . :
JMFS050H05+ GGATGGTGAATTCAATTTCTTCTCAGAAGGAAAAGTGAAATATACTTCATCTCCGGGCTT
JMSF045F10+ GGATGGNGAATTCAATTTCTTCTCAGAAGGAAAAGNGAAATATANTTCATNTCCGGGCTT
                      ____________________________________________________________
consensus GGATGGTGAATTCAATTTCTTCTCAGAAGGAAAAGTGAAATATACTTCATCTCCGGGCTT
 
. : . : . : . : . : . :
JMFS050H05+ CAAACTTCTCCCTTTACA
JMSF045F10+ CAAACTTCTCCCTTTACAGGNTGAGAGGCCGGAAACCTCACTAGTACCCACAAACCACCA
                      ____________________________________________________________
consensus CAAACTTCTCCCTTTACAGGNTGAGAGGCCGGAAACCTCACTAGTACCCACAAACCACCA
 
. : . : . : . : . : . :
JMSF045F10+ CTCACTCCCCATCTCACACCCATCAGCATCGCTTATGCACCCATTATTACTCTCCCGGTT
JMSF025K05+ CCATCTCACACCCATCAGCATCGCTTATGCACCCATTATTACTCTCCCGGTT
JMSF038O04+ TCCCCATCTCACACCCATCAGCATCGCTTATGCACCCATTATTACTCTCCCGGTT
                      ____________________________________________________________
consensus CTCACTCCCCATCTCACACCCATCAGCATCGCTTATGCACCCATTATTACTCTCCCGGTT
 
. : . : . : . : . : . :
JMSF045F10+ CTCACTCTTCAGCTGTGAACCATTAGCTGAAATCGTACTACGCTCACATTTCTCACCCTC
JMSF025K05+ CTCACTCTTCAGCTGTGAACCATTAGCTGAAATCGTACTACGCTCACATTTCTCACCCTC
JMSF038O04+ CTCACTCTTCAGCTGTGAACCATTAGCTGAAATCGTACTACGCTCACATTTCTCACCCTC
                      ____________________________________________________________
consensus CTCACTCTTCAGCTGTGAACCATTAGCTGAAATCGTACTACGCTCACATTTCTCACCCTC
 
. : . : . : . : . : . :
JMSF045F10+ ACTACTACTTCTCCTTGTAGTTGAACCTAGACATTGTGTCCCTGAGCTTGAATTAAGATT
JMSF025K05+ ACTACTACTTCTCCTTGTAGTTGAACCTAGACATTGTGTCCCTGAGCTTGAATTAAGATT
JMSF038O04+ ACTACTACTTCTCCTTGTAGTTGAACCTAGACATTGTGTCCCTGAGCTTGAATTAAGATT
                      ____________________________________________________________
consensus ACTACTACTTCTCCTTGTAGTTGAACCTAGACATTGTGTCCCTGAGCTTGAATTAAGATT
 
. : . : . : . : . : . :
JMSF045F10+ GGGTGGCTCAGGGGTTTTCCTAAATTCTAAACTTCTTGAAACCAGGGGTGTCAAAAATGA
JMSF025K05+ GGGTGGCTCAGGGGTTTTCCTAAATTCT-AACTTCTTGAAACCAGGGGTGTCAAAAATGA
JMSF038O04+ GGGTGGCTCAGGGGTTTTCCTAAATTCT-AACTTCTTGAAACCAGGGGTGTCAAAAATGA
                      ____________________________________________________________
consensus GGGTGGCTCAGGGGTTTTCCTAAATTCT-AACTTCTTGAAACCAGGGGTGTCAAAAATGA
 
. : . : . : . : . : . :
JMSF045F10+ TGTTAATTGCGGCCGTTGCATCGTTATTCGCCATATGAAGAGCTCGAATTATATCCATCT
JMSF025K05+ TGTTAATTGCGGCCGTTGCATCGTTATTCGCCATATGAAGAGCTCGAATTATATCCATCT
JMSF038O04+ TGTTAATTGCGGCCGTTGCATCGTTATTCGCCATATGAAGAGCTCGAATTATATCCATCT
                      ____________________________________________________________
consensus TGTTAATTGCGGCCGTTGCATCGTTATTCGCCATATGAAGAGCTCGAATTATATCCATCT
 
. : . : . : . : . : . :
JMSF045F10+ CGGTGTACTCATCGCCGACGATGGACCGGACCGTAGAAACAAGTTCTTCAGGTACTTTGT
JMSF025K05+ CGGTGTACTCATCGCCGACGATGGACCGGACCGTAGAAACAAGTTCTTCAGGTACTTTGT
JMSF038O04+ CGGTGTACTCATCGCCGACGATGGACCGGACCGTAGAAACAAGTTCTTCAGGTACTTTGT
                      ____________________________________________________________
consensus CGGTGTACTCATCGCCGACGATGGACCGGACCGTAGAAACAAGTTCTTCAGGTACTTTGT
 
. : . : . : . : . : . :
JMSF045F10+ TACCCATTCCTGTAATACCTGCAGGGAATTCCCCCAATTTTATTTGTAAAGGAAATAATC
JMSF025K05+ TACCCATTCCTGTAATACCTGCAGGGAATTCCCCCAATTTTATTTGTAAAGGAAATAATC
JMSF038O04+ TACCCATTCCTGTAATACCTGCAGGGAATTCCCCCAATTTTATTTGTAAAGGAAATAATC
                      ____________________________________________________________
consensus TACCCATTCCTGTAATACCTGCAGGGAATTCCCCCAATTTTATTTGTAAAGGAAATAATC
 
. : . : . : . : . : . :
JMSF045F10+ TTCTGAAGAATTTGGGCTTAATTTTGAAATCTTTGGGGATTTGTATCTCCTGCTAACCCT
JMSF025K05+ TTCTGAAGAATTTGGGCTTAATTTTGAAATCTTTGGGGATTTGTATCTCCTGCTAACCCT
JMSF038O04+ TTCTGAAGAATTTGGGCTTAATTTTGAAATCTTTGGGGATTTGTATCTCCTGCTAACCCT
                      ____________________________________________________________
consensus TTCTGAAGAATTTGGGCTTAATTTTGAAATCTTTGGGGATTTGTATCTCCTGCTAACCCT
 
. : . : . : . : . : . :
JMSF045F10+ CAAATTGAACGGGGTTTATGGGAGAATTCGAAACCCTAGATGGATATGAATGTTCGCGCC
JMSF025K05+ CAAATTGAACGGGGTTTATGGGAGAATTCGAAACCCTAGATGGATATGAATGTTCGCGCC
JMSF038O04+ CAAATTGAACGGGGTTTATGGGAGAATTCGAAACCCTAGATGGATATGAATGTTCGCGCC
                      ____________________________________________________________
consensus CAAATTGAACGGGGTTTATGGGAGAATTCGAAACCCTAGATGGATATGAATGTTCGCGCC