Contig 000889:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF037G24Sequence684000889 (2)ref|XP_009631060.1|2e-63PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Nicot663001439 (3)ref|XP_009777113.1|9e-52PREDICTED: probable anion transporter 1, chloroplastic [Nicotiana sylvestris]
JMSF038G24Sequence583000889 (2)ref|XP_009631060.1|5e-44PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Nicot822001439 (3)ref|XP_009777113.1|1e-67PREDICTED: probable anion transporter 1, chloroplastic [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF037G24+                                               GCTGCAATTGGTGTGAGGATNGTA
                      ____________________________________________________________
consensus                                                 GCTGCAATTGGTGTGAGGATNGTA
 
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JMSF037G24+           GCTATAGACCACCAAACTACACCAAATCCTAAGACAAGCTTCCCTCCAACCGTGTCAGCC
                      ____________________________________________________________
consensus             GCTATAGACCACCAAACTACACCAAATCCTAAGACAAGCTTCCCTCCAACCGTGTCAGCC
 
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JMSF037G24+           CATATTCCCCCTGCAATCTGAGTTAAAAGATAGCCCCAGAAAAAGGAAGATTGTATCAAA
JMSF038G24+                                                                TATCAAA
                      ____________________________________________________________
consensus             CATATTCCCCCTGCAATCTGAGTTAAAAGATAGCCCCAGAAAAAGGAAGATTGTATCAAA
 
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JMSF037G24+           CCAACAGTCGTAGGACTCCAATGATATTCTGATGCCATTGGAAGTATGGCTATGCTCATG
JMSF038G24+           CCAACAGTCGTAGGACTCCAATGATATTCTGATGCCATTGGAAGTATGGCTATGCTCATG
                      ____________________________________________________________
consensus             CCAACAGTCGTAGGACTCCAATGATATTCTGATGCCATTGGAAGTATGGCTATGCTCATG
 
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JMSF037G24+           TTTACTCTATCCATATTGCAAAGTAGAAAAGCGGAGAAACAGAGAAGCACGATAACCCAA
JMSF038G24+           TTTACTCTATCCATATTGCAAAGTAGAAAAGCGGAGAAACAGAGAAGCTCGATAACCCAA
                      ____________________________________________________________
consensus             TTTACTCTATCCATATTGCAAAGTAGAAAAGCGGAGAAACAGAGAAGCTCGATAACCCAA
 
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JMSF037G24+           CGCTTGGGGAATCCCCCCGATATGGTCTCACCATCATCCTCCGTCAATACGTCGTCGTTG
JMSF038G24+           CGCTTGGGGAATCCCCCCGATATGGTCTCACCATCATCCTCCGTCAATACGTCGTNGTTG
                      ____________________________________________________________
consensus             CGCTTGGGGAATCCCCCCGATATGGTCTCACCATCATCCTCCGTCAATACGTCGTCGTTG
 
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JMSF037G24+           AGAGCATCTTCAAACTTGAGAGATTCCGGCACCGAGTCCGAAATGCCATACGTTTTGGAC
JMSF038G24+           AGAGCATCTTCAAACTTGAGAGATTCCGGCACCGAGTCCGAAATNCCATACGTTTTGGAC
                      ____________________________________________________________
consensus             AGAGCATCTTCAAACTTGAGAGATTCCGGCACCGAGTCCGAAATGCCATACGTTTTGGAC
 
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JMSF037G24+           TTGACATCCGCCCATGCCCTCCAACTCGTCCTCCTAATCAATCCACGTCTAAAACCCCGC
JMSF038G24+           TTGACATCCGCCCATGCCCTCCAACTCGTCCTCCTAATCAATCCACGTCTAAAACCCCGC
                      ____________________________________________________________
consensus             TTGACATCCGCCCATGCCCTCCAACTCGTCCTCCTAATCAATCCACGTCTAAAACCCCGC
 
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JMSF037G24+           CCCGGTAGAAACGGAGACCCGAATTCGAACAGAGTATGAGTGTGAGAGCGAGAGCTAAAA
JMSF038G24+           CCCGGTAGAAACGGAGACCCGAATTCGAACAGAGTATGAGTGTGAGAGCGAGAGCTAAAA
                      ____________________________________________________________
consensus             CCCGGTAGAAACGGAGACCCGAATTCGAACAGAGTATGAGTGTGAGAGCGAGAGCTAAAA
 
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JMSF037G24+           CTTCTCTTGGGAAAGGTCGCCTCGGGTGAGCAGTGGAGCTTCGGAGGAAGGTTGTAGTAG
JMSF038G24+           CTTCTCTTGGGAAAGGTCGCCTCGGGTGAGCAGTGGAGNTTCGGAGGAAGGTTGTAGTAG
                      ____________________________________________________________
consensus             CTTCTCTTGGGAAAGGTCGCCTCGGGTGAGCAGTGGAGCTTCGGAGGAAGGTTGTAGTAG
 
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JMSF037G24+           GAGAGAAGAAGAGCTCTCGCTGTCATAGCTTTGAGTGGCAGCGAGATTTCGCTGCTACTT
JMSF038G24+           GAGAGAAGAAGAGCTCTCGCTGTCATAGCTNTGAGTGGCAGCGAGATTTCGCTGCTACTT
                      ____________________________________________________________
consensus             GAGAGAAGAAGAGCTCTCGCTGTCATAGCTTTGAGTGGCAGCGAGATTTCGCTGCTACTT
 
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JMSF037G24+           TCAATTCTGATTCTTTCTCTTCCTCTTCTCTTCGCCCAGTCTGTGTGTTCTGGTTGAGTC
JMSF038G24+           TCAATTCTGATTCTTTCTCTTCCTNTTCTCTTCGCCCAGTCTGTGTGTTCTGGTTGAGTC
                      ____________________________________________________________
consensus             TCAATTCTGATTCTTTCTCTTCCTCTTCTCTTCGCCCAGTCTGTGTGTTCTGGTTGAGTC