Contig 000883:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS080A07+                                    TAACCAAGACCAAGACACAAAGAGGACCCAACCTG
                      ____________________________________________________________
consensus                                      TAACCAAGACCAAGACACAAAGAGGACCCAACCTG
 
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JMFS080A07+           CTCATTGGTGGGTCCATCAATCAAGCCCCACTTCTTTTGATTCCCTTGGGGAAGAAATAG
                      ____________________________________________________________
consensus             CTCATTGGTGGGTCCATCAATCAAGCCCCACTTCTTTTGATTCCCTTGGGGAAGAAATAG
 
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JMFS080A07+           ATGATACTAAAGAACCAAGGGAATCAAGTCGCAATGTCGTATCTGCACAATAACCACCTT
JMSF037L19+                                                       GCACAATAACCACCTT
                      ____________________________________________________________
consensus             ATGATACTAAAGAACCAAGGGAATCAAGTCGCAATGTCGTATCTGCACAATAACCACCTT
 
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JMFS080A07+           GCACTCCAGCTCCTCCTATTTGAATTGGATTGCCCAGATTATTATATGCATTTAAGGACA
JMSF037L19+           GCACTCCAGCTCCTCCTATTTGAATTGGATTGCCCAGATTATTATATGCATTTAAGGACA
                      ____________________________________________________________
consensus             GCACTCCAGCTCCTCCTATTTGAATTGGATTGCCCAGATTATTATATGCATTTAAGGACA
 
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JMFS080A07+           GGTTTGCAGCAAAACCAAAACTGTGGAATCTGGGATCCATAAACTGTTAGCTAAAACTCC
JMSF037L19+           GGTTTGCAGCAAAACCAAAACTGTGGAATCTGGGATCCATAAACTGTTAGCTAAAACTCC
                      ____________________________________________________________
consensus             GGTTTGCAGCAAAACCAAAACTGTGGAATCTGGGATCCATAAACTGTTAGCTAAAACTCC
 
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JMFS080A07+           ACACAACTATTACTTGAACCAATCTTAATAGCAAAGATGCAGTTAACCTGACTTCCGGGC
JMSF037L19+           ACACAACTATTACTTGAACCAATCTTAATAGCAAAGATGCAGTTAACCTGACTTCCGGGC
                      ____________________________________________________________
consensus             ACACAACTATTACTTGAACCAATCTTAATAGCAAAGATGCAGTTAACCTGACTTCCGGGC
 
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JMFS080A07+           TTTTATTAAAAAAAAACAAAGTTAGTCCTAAAACTAGTGCTAGACATCTCTGGAACAGCA
JMSF003M02+                                              AGTGCTAGACATCTCTGGAACAGCA
JMSF037L19+           TTTTATTAAAAAAAAACAAAGTTAGTCCTAAAACTAGTGCTAGACATCTCTGGAACAGCA
                      ____________________________________________________________
consensus             TTTTATTAAAAAAAAACAAAGTTAGTCCTAAAACTAGTGCTAGACATCTCTGGAACAGCA
 
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JMFS080A07+           CATCCCACCCCCACTTACAAAACCTGAAGTATCACGTCGATCCATTTCCTTAGAAAATAA
JMSF003M02+           CATCCCACCCCCACTTACAAAACCTGAAGTATCACGTCGATCCATTTCCTTAGAAAATAA
JMSF037L19+           CATCCCACCCCCACTTACAAAACCTGAAGTATCACGTCGATCCATTTCCTTAGAAAATAA
                      ____________________________________________________________
consensus             CATCCCACCCCCACTTACAAAACCTGAAGTATCACGTCGATCCATTTCCTTAGAAAATAA
 
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JMFS080A07+           TATCCCAGCTGCTAGTGATCAGCAATGGTAATGCATGCAGATAATATGCAAACTCAAAAC
JMSF003M02+           TATCCCAGCTGCTAGTGATCAGCAATGGTAATGCATGCAGATAATATGCAAACTCAAAAC
JMSF037L19+           TATCCCAGCTGCTAGTGATCAGCAATGGTAATGCATGCAGATAATATGCAAACTCAAAAC
                      ____________________________________________________________
consensus             TATCCCAGCTGCTAGTGATCAGCAATGGTAATGCATGCAGATAATATGCAAACTCAAAAC
 
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JMFS080A07+           CTTCAGCACAATATCATTACAACCAATCATCCTTTCGGACTCAATTATCTCATGAGACAG
JMSF003M02+           CTTCAGCACAATATCATTACAACCAATCATCCTTTCGGACTCAATTATCTCATGAGACAG
JMSF037L19+           CTTCAGCACAATATCATTACAACCAATCATCCTTTCGGACTCAATTATCTCATGAGACAG
                      ____________________________________________________________
consensus             CTTCAGCACAATATCATTACAACCAATCATCCTTTCGGACTCAATTATCTCATGAGACAG
 
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JMFS080A07+           AAACGCTTCCTAGAGAATCAGAAGATAGATACATATACATGTATATATCATCAGCACACA
JMSF003M02+           AAACGCTTCCTAGAGAATCAGAAGATAGATACATATACATGTATATATCATCAGCACACA
JMSF037L19+           AAACGCTTCCTAGAGAATCAGAAGATAGATACATATACATGTATATATCATCAGCACACA
                      ____________________________________________________________
consensus             AAACGCTTCCTAGAGAATCAGAAGATAGATACATATACATGTATATATCATCAGCACACA
 
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JMFS080A07+           AAC                                                         
JMSF003M02+           AACATATACATACAGTACATGTGCAGAGAGAGAGAGAGAGAGAAAATTTAGGGCTTTTGA
JMSF037L19+           AACATATACATACAGTACATGTGCAGAGAGAGAGAGAGAGAGAAAATTTAGGGCTTTTGA
                      ____________________________________________________________
consensus             AACATATACATACAGTACATGTGCAGAGAGAGAGAGAGAGAGAAAATTTAGGGCTTTTGA
 
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JMSF003M02+           GCGCCGGCAGAGGGCGAATGGAAC                                    
JMSF037L19+           GCGCCGGCAGAGGGCGAATGGAACAGGGAGAGAAAAGTGAGTTGTGAGGACAATATGACC
                      ____________________________________________________________
consensus             GCGCCGGCAGAGGGCGAATGGAACAGGGAGAGAAAAGTGAGTTGTGAGGACAATATGACC