Contig 000882:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS129D09Sequence600000882 (3)gb|EYU19141.1|2e-93hypothetical protein MIMGU_mgv1a0005921mg, partial [Erythranthe guttata]
JMFS147B06Sequence557000882 (3)gb|EYU19141.1|8e-109hypothetical protein MIMGU_mgv1a0005921mg, partial [Erythranthe guttata]
JMSF037L13Sequence304000882 (3)700007185 (2)ref|XP_009587164.1|3e-116PREDICTED: DNA damage-binding protein 1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS147B06+ TGAAGTTCC
                      ____________________________________________________________
consensus TGAAGTTCC
 
. : . : . : . : . : . :
JMFS147B06+ TCGAGCCTGATGTTAAAAGCTTCCTTCAGCTGGCCTTTGTTATCAAATGGTATAACCTTG
JMFS129D09+ TATAACCTTG
                      ____________________________________________________________
consensus TCGAGCCTGATGTTAAAAGCTTCCTTCAGCTGGCCTTTGTTATCAAATGGTATAACCTTG
 
. : . : . : . : . : . :
JMFS147B06+ AATAATCCATCATATAGGTGAAGTCCAATTAATCTGCAATCTGGGTCAATTATGCCAATC
JMFS129D09+ AATAATCCATCATATAGGTGAAGTCCAATTAATCTGCAATCTGGGTCAATTATGCCAATC
                      ____________________________________________________________
consensus AATAATCCATCATATAGGTGAAGTCCAATTAATCTGCAATCTGGGTCAATTATGCCAATC
 
. : . : . : . : . : . :
JMFS147B06+ TGCCCATTATCTGTGGGACGGCCAATTCGATCAGAGACATCCCCCATCGCCCTCGTAATA
JMFS129D09+ TGCCCATTATCTGTGGGACGGCCAATTCGATCAGAGACATCCCCCATCGCCCTCGTAATA
                      ____________________________________________________________
consensus TGCCCATTATCTGTGGGACGGCCAATTCGATCAGAGACATCCCCCATCGCCCTCGTAATA
 
. : . : . : . : . : . :
JMFS147B06+ ACCTCAGATATCTCTGCATCCCATTGAAGAACACAGAATTTGTATCTTTCAGTTGCAATG
JMFS129D09+ ACCTCAGATATCTCTGCATCCCATTGAAGAACACAGAATTTGTATCTTTCAGTTGCAATG
                      ____________________________________________________________
consensus ACCTCAGATATCTCTGCATCCCATTGAAGAACACAGAATTTGTATCTTTCAGTTGCAATG
 
. : . : . : . : . : . :
JMFS147B06+ AAAAGCAGATCTTGTGTTTCACCATGTGGACGAAAAAGCTCAAGTGTGGCAATTCTTCCA
JMFS129D09+ AAAAGCAGATCTTGTGTTTCACCATGTGGACGAAAAAGCTCAAGTGTGGCAATTCTTCCA
                      ____________________________________________________________
consensus AAAAGCAGATCTTGTGTTTCACCATGTGGACGAAAAAGCTCAAGTGTGGCAATTCTTCCA
 
. : . : . : . : . : . :
JMFS147B06+ TATATTGGCACATCCAACATTGGCTGTAAACCTTGAGGAGTGAGTAAATGAATCTCGATT
JMFS129D09+ TATATTGGCACATCCAACATTGGCTGTAAACCTTGAGGAGTGAGTAAATGAATCTCGATT
                      ____________________________________________________________
consensus TATATTGGCACATCCAACATTGGCTGTAAACCTTGAGGAGTGAGTAAATGAATCTCGATT
 
. : . : . : . : . : . :
JMFS147B06+ CGAGTGCATTTCGCGATGATGAGATTGAGCTCCTGCGGACCAGTAAAATTGCCGACGCAG
JMFS129D09+ CGAGTGCATTTCGCGATGATGAGATTGAGCTCCTGCGGACCAGTAAAATTGCCGACGCAG
                      ____________________________________________________________
consensus CGAGTGCATTTCGCGATGATGAGATTGAGCTCCTGCGGACCAGTAAAATTGCCGACGCAG
 
. : . : . : . : . : . :
JMFS147B06+ GAATGCGTAACGTTAGTTGGCTTGTGAGCCGTCACCACATAGTTCCATACGCTCATCTCT
JMFS129D09+ GAATGCGTAACGTTAGTTGGCTTGTGAGCCGTCACCACATAGTTCCATACGCTCATCTCT
                      ____________________________________________________________
consensus GAATGCGTAACGTTAGTTGGCTTGTGAGCCGTCACCACATAGTTCCATACGCTCATCTCT
 
. : . : . : . : . : . :
JMFS147B06+ C
JMFS129D09+ CTGTCTCCGTCTGTCTATCACTCTTAAAACCCTAGATACTCTCGCTGTXXXXXXXXXXXX
                      ____________________________________________________________
consensus CTGTCTCCGTCTGTCTATCACTCTTAAAACCCTAGATACTCTCGCTGTNNNNNNNNNNNN
 
. : . : . : . : . : . :
JMFS129D09+ XXXXXXXXXXXXXXXXXXXXCAATGTGTATATACTTGTGTATCTGATAGGAAGAAGCTCA
JMSF037L13+ CAATGTGTATATACTTGTGTATCTGATAGGAAGAAGCTCA
                      ____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNCAATGTGTATATACTTGTGTATCTGATAGGAAGAAGCTCA
 
. : . : . : . : . : . :
JMFS129D09+ TCGGCGTCAATCGGAGCTGCTGCTGAGAATGCAGGAAGAGAAAGATAAAA
JMSF037L13+ TCGGCGTCAATCGGAGCTGCTGCTGAGAATGCAGGAAGAGAAAGATAAAACTGTTTAGAA
                      ____________________________________________________________
consensus TCGGCGTCAATCGGAGCTGCTGCTGAGAATGCAGGAAGAGAAAGATAAAACTGTTTAGAA
 
. : . : . : . : . : . :
JMSF037L13+ ATGTGAGAATTTTTCAATTTCTTCAGCTGGGAAGCTGGGAAGTGAAACAGAACGAGTGCC
                      ____________________________________________________________
consensus ATGTGAGAATTTTTCAATTTCTTCAGCTGGGAAGCTGGGAAGTGAAACAGAACGAGTGCC