Contig 000882:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS129D09Sequence600000882 (3)gb|EYU19141.1|2e-93hypothetical protein MIMGU_mgv1a0005921mg, partial [Erythranthe guttata]
JMFS147B06Sequence557000882 (3)gb|EYU19141.1|8e-109hypothetical protein MIMGU_mgv1a0005921mg, partial [Erythranthe guttata]
JMSF037L13Sequence304000882 (3)700007185 (2)ref|XP_009587164.1|3e-116PREDICTED: DNA damage-binding protein 1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFS147B06+                                                              TGAAGTTCC
                      ____________________________________________________________
consensus                                                                TGAAGTTCC
 
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JMFS147B06+           TCGAGCCTGATGTTAAAAGCTTCCTTCAGCTGGCCTTTGTTATCAAATGGTATAACCTTG
JMFS129D09+                                                             TATAACCTTG
                      ____________________________________________________________
consensus             TCGAGCCTGATGTTAAAAGCTTCCTTCAGCTGGCCTTTGTTATCAAATGGTATAACCTTG
 
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JMFS147B06+           AATAATCCATCATATAGGTGAAGTCCAATTAATCTGCAATCTGGGTCAATTATGCCAATC
JMFS129D09+           AATAATCCATCATATAGGTGAAGTCCAATTAATCTGCAATCTGGGTCAATTATGCCAATC
                      ____________________________________________________________
consensus             AATAATCCATCATATAGGTGAAGTCCAATTAATCTGCAATCTGGGTCAATTATGCCAATC
 
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JMFS147B06+           TGCCCATTATCTGTGGGACGGCCAATTCGATCAGAGACATCCCCCATCGCCCTCGTAATA
JMFS129D09+           TGCCCATTATCTGTGGGACGGCCAATTCGATCAGAGACATCCCCCATCGCCCTCGTAATA
                      ____________________________________________________________
consensus             TGCCCATTATCTGTGGGACGGCCAATTCGATCAGAGACATCCCCCATCGCCCTCGTAATA
 
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JMFS147B06+           ACCTCAGATATCTCTGCATCCCATTGAAGAACACAGAATTTGTATCTTTCAGTTGCAATG
JMFS129D09+           ACCTCAGATATCTCTGCATCCCATTGAAGAACACAGAATTTGTATCTTTCAGTTGCAATG
                      ____________________________________________________________
consensus             ACCTCAGATATCTCTGCATCCCATTGAAGAACACAGAATTTGTATCTTTCAGTTGCAATG
 
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JMFS147B06+           AAAAGCAGATCTTGTGTTTCACCATGTGGACGAAAAAGCTCAAGTGTGGCAATTCTTCCA
JMFS129D09+           AAAAGCAGATCTTGTGTTTCACCATGTGGACGAAAAAGCTCAAGTGTGGCAATTCTTCCA
                      ____________________________________________________________
consensus             AAAAGCAGATCTTGTGTTTCACCATGTGGACGAAAAAGCTCAAGTGTGGCAATTCTTCCA
 
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JMFS147B06+           TATATTGGCACATCCAACATTGGCTGTAAACCTTGAGGAGTGAGTAAATGAATCTCGATT
JMFS129D09+           TATATTGGCACATCCAACATTGGCTGTAAACCTTGAGGAGTGAGTAAATGAATCTCGATT
                      ____________________________________________________________
consensus             TATATTGGCACATCCAACATTGGCTGTAAACCTTGAGGAGTGAGTAAATGAATCTCGATT
 
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JMFS147B06+           CGAGTGCATTTCGCGATGATGAGATTGAGCTCCTGCGGACCAGTAAAATTGCCGACGCAG
JMFS129D09+           CGAGTGCATTTCGCGATGATGAGATTGAGCTCCTGCGGACCAGTAAAATTGCCGACGCAG
                      ____________________________________________________________
consensus             CGAGTGCATTTCGCGATGATGAGATTGAGCTCCTGCGGACCAGTAAAATTGCCGACGCAG
 
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JMFS147B06+           GAATGCGTAACGTTAGTTGGCTTGTGAGCCGTCACCACATAGTTCCATACGCTCATCTCT
JMFS129D09+           GAATGCGTAACGTTAGTTGGCTTGTGAGCCGTCACCACATAGTTCCATACGCTCATCTCT
                      ____________________________________________________________
consensus             GAATGCGTAACGTTAGTTGGCTTGTGAGCCGTCACCACATAGTTCCATACGCTCATCTCT
 
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JMFS147B06+           C                                                           
JMFS129D09+           CTGTCTCCGTCTGTCTATCACTCTTAAAACCCTAGATACTCTCGCTGTXXXXXXXXXXXX
                      ____________________________________________________________
consensus             CTGTCTCCGTCTGTCTATCACTCTTAAAACCCTAGATACTCTCGCTGTNNNNNNNNNNNN
 
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JMFS129D09+           XXXXXXXXXXXXXXXXXXXXCAATGTGTATATACTTGTGTATCTGATAGGAAGAAGCTCA
JMSF037L13+                               CAATGTGTATATACTTGTGTATCTGATAGGAAGAAGCTCA
                      ____________________________________________________________
consensus             NNNNNNNNNNNNNNNNNNNNCAATGTGTATATACTTGTGTATCTGATAGGAAGAAGCTCA
 
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JMFS129D09+           TCGGCGTCAATCGGAGCTGCTGCTGAGAATGCAGGAAGAGAAAGATAAAA          
JMSF037L13+           TCGGCGTCAATCGGAGCTGCTGCTGAGAATGCAGGAAGAGAAAGATAAAACTGTTTAGAA
                      ____________________________________________________________
consensus             TCGGCGTCAATCGGAGCTGCTGCTGAGAATGCAGGAAGAGAAAGATAAAACTGTTTAGAA
 
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JMSF037L13+           ATGTGAGAATTTTTCAATTTCTTCAGCTGGGAAGCTGGGAAGTGAAACAGAACGAGTGCC
                      ____________________________________________________________
consensus             ATGTGAGAATTTTTCAATTTCTTCAGCTGGGAAGCTGGGAAGTGAAACAGAACGAGTGCC