Contig 000879:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010I09Sequence438000879 (4)ref|XP_011025653.1|3e-47PREDICTED: cytochrome P450 CYP82H23-like [Populus euphratica]743004247 (4)emb|CAN66846.1|1e-113hypothetical protein VITISV_002367 [Vitis vinifera]
JMSF018G15Sequence503000879 (4)ref|XP_011025653.1|2e-56PREDICTED: cytochrome P450 CYP82H23-like [Populus euphratica]782004247 (4)gb|KHN36186.1|2e-103Cytochrome P450 82A3 [Glycine soja]
JMSF034I15Sequence663000879 (4)gb|KHG16624.1|2e-95Cytochrome P450 [Gossypium arboreum]730004247 (4)ref|XP_007047111.1|2e-99Cytochrome P450 [Theobroma cacao] gb|EOX91268.1| Cytochrome P450 [Theobroma caca
JMSF037D11Sequence645000879 (4)ref|XP_011025653.1|5e-70PREDICTED: cytochrome P450 CYP82H23-like [Populus euphratica]760004247 (4)emb|CAN66846.1|6e-98hypothetical protein VITISV_002367 [Vitis vinifera]

Alignment

This contig is upended


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JMSF034I15+                                                   AGCTCTTTCGCAATTCTCTT
                      ____________________________________________________________
consensus                                                     AGCTCTTTCGCAATTCTCTT
 
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JMSF034I15+           CATCGACTTCTTGTGCCCTTGCAAGTCCAGCCAGTCAAGGAAGGGGAAAGAATCAGACAA
                      ____________________________________________________________
consensus             CATCGACTTCTTGTGCCCTTGCAAGTCCAGCCAGTCAAGGAAGGGGAAAGAATCAGACAA
 
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JMSF034I15+           CACAAACACACCAAAGAAGTACAGGAATCCTCTGATCACTTTTTCGCACCTTCTCGCCTC
                      ____________________________________________________________
consensus             CACAAACACACCAAAGAAGTACAGGAATCCTCTGATCACTTTTTCGCACCTTCTCGCCTC
 
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JMSF034I15+           TTCCTTGTTGCAATCCACGCCGTCTCCGGTGAACCTCTTCCCTCCGACCATCCTCACTGA
                      ____________________________________________________________
consensus             TTCCTTGTTGCAATCCACGCCGTCTCCGGTGAACCTCTTCCCTCCGACCATCCTCACTGA
 
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JMSF034I15+           CATGTTCCGGATCAGGTTTACAAACCACGGCTGCAAATCCACCATGACACCACGGTTAGG
JMSF037D11+                                                      ATGAAACCACGCTCAGG
                      ____________________________________________________________
consensus             CATGTTCCGGATCAGGTTTACAAACCACGGCTGCAAATCCACCATGACACCACGGTTAGG
 
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JMSF034I15+           ATTTCCACTGCTAACCCATAACTCATACAGCTCTCTGATGGAAGTCTCCAGTTCTGATGC
JMSF018G15+                                                               TCTGATGC
JMSF037D11+           ATTTCCATTGCTAACCCACAACTCATACAGCTCTCTAATGGAAGTCTCCAGTTCTGATGT
                      ____________________________________________________________
consensus             ATTTCCATTGCTAACCCATAACTCATACAGCTCTCTGATGGAAGTCTCCAGTTCTGATGC
 
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JMSF034I15+           TCTTATCGGGTTCAGCATATCAACCTGCCGGTTAGACAGGAGATGGAGAGTGGAAATCTT
JMSF010I09+                                                                    CTT
JMSF018G15+           TCTTATCGGCTTCAGCATATCAACCTGCCGGTTAGACAGGAGATGGAGAGTGGAAATCTT
JMSF037D11+           TCTTATGGGATTCAGCATCTCAACTTGCCGGTTAGAGAGAAGATGGAGAGTGACAATCTT
                      ____________________________________________________________
consensus             TCTTATCGGGTTCAGCATATCAACCTGCCGGTTAGACAGGAGATGGAGAGTGGAAATCTT
 
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JMSF034I15+           GCGCACCTCTCGCCAATATTCCCCGTAAGGAGAAAGCCCGAAGAAAGCATAATCATAGCC
JMSF010I09+           GCGCACCTCTCGCCAATATTCCCCGTAAGGAGAAAGCCCGAAGAAAGCATAATCATAGCC
JMSF018G15+           GCGCACCTCTCGCCAATATTCCCCGTAAGGAGAAAGCCCGAAGAAAGCATAATCATAGCC
JMSF037D11+           GCGCATTTCTCGCCAATATTCCCCGTAAGGAGCGACGCCGAAGAAAGCATAATCATAGCC
                      ____________________________________________________________
consensus             GCGCACCTCTCGCCAATATTCCCCGTAAGGAGAAAGCCCGAAGAAAGCATAATCATAGCC
 
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JMSF034I15+           AAGAAGCTTAGAAGCAGCTAGTCTCGGACGGTCACTGAATACCTTGTCGTGAGTGGTGAA
JMSF010I09+           AAGAAGCTTAGAAGCAGCTAGTCTCGGACGGTCACTGAATACCTTGTCGTGAGTGGTGAA
JMSF018G15+           AAGAAGCTTAGAAGCAGCTAGTCTCGGACGGTCACTGAATACCTTGTCGTGAGTGGTGAA
JMSF037D11+           GAGAAACTTAGAGGCGGCTATTCTCGGACGGTCGCAGAATGCCTTGTCGTGAGTGGTGTA
                      ____________________________________________________________
consensus             AAGAAGCTTAGAAGCAGCTAGTCTCGGACGGTCACTGAATACCTTGTCGTGAGTGGTGAA
 
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JMSF034I15+           ACACTCCCTTGCCATTTCCCAACTACTTATGACCAAAGCTTGATGACTGCCCAGCTTTAT
JMSF010I09+           ACACTCCCTTGCCATTTCCCAACTACTTATGACCAAAGCTTGATGACTGCCCAGCTTTAT
JMSF018G15+           ACACTCCCTTGCCATTTCCCAACTACTTATGACCAAAGCTTGATGACTGCCCAGCTTTAT
JMSF037D11+           ACACTCCCTCGCCATTTCCCAACTACTTATGACCAGAGCTTTATGGCTGCCGAGCTTTAT
                      ____________________________________________________________
consensus             ACACTCCCTTGCCATTTCCCAACTACTTATGACCAAAGCTTGATGACTGCCCAGCTTTAT
 
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JMSF034I15+           CCCCATCGCCGGTCCATACTTGTCGGCCATGGCACTGAGTACTTTATAAATAAGTTTGCC
JMSF010I09+           CCCCATCGCCGGTCCATACTTGTCGGCCATGGCACTGAGTACTTTATAAATAAGTTTGCC
JMSF018G15+           CCCCATCGCCGGTCCATACTTGTCGGCCATGGCACTGAGTACTTTATAAATAAGTTTGCC
JMSF037D11+           CGCCATCGCCGGTCCATGCTTGTCGGCCATGGCGCCGAGGACTTTATACGTAAGTTTGCC
                      ____________________________________________________________
consensus             CCCCATCGCCGGTCCATACTTGTCGGCCATGGCACTGAGTACTTTATAAATAAGTTTGCC
 
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JMSF034I15+           ACCGCTGAAGCAAAGCAGGTGGCCAATAACAGGCAAAGCGC                   
JMSF010I09+           ACCGCTGAAGCAAAGCAGGTGGCCAATAACAGGCAAAGCGCCATCAGGCTGTGGCAAACT
JMSF018G15+           ACCGCTGAAGCAAAGCAGGTGGCCAATAACAGGCAAAGCGCCATCAGGCTGTGGCAAACT
JMSF037D11+           ACCGCCGAAGCAGAAAAGGTGGCCGATAACCGGCAAAGCGCCGTCCGGTTGCGGCAAACT
                      ____________________________________________________________
consensus             ACCGCTGAAGCAAAGCAGGTGGCCAATAACAGGCAAAGCGCCATCAGGCTGTGGCAAACT
 
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JMSF010I09+           CCGGCCCTTAATTTCAGCAACTTGTCT---CCTTGACTGAAAGTAACGAACCAAGAAAAT
JMSF018G15+           CCGGCCCTTAATTTCAGCAACTTGTCT---CCTTGACTGAAAGTAACGAACCAAGAAAAT
JMSF037D11+           CCGGCCTTTTATGTCAGAAACCCGTCTCCGCCTTGACTGAAAGTAACGAGCCAAGAAAAT
                      ____________________________________________________________
consensus             CCGGCCCTTAATTTCAGCAACTTGTCT---CCTTGACTGAAAGTAACGAACCAAGAAAAT
 
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JMSF010I09+           CAAGGCACAGAGAGTTGATGCAAAAGTTAGAAGAAGTTGGAATCTTTGATCCAT      
JMSF018G15+           CAAGGCACAGAGAGTTGATGCAAAAGTTAGAAGAAGTTGGAATCTTTGATCCAT      
JMSF037D11+           CAAGGCGCAGAGAGTTGATACAAAAGTTAGAAGAAGTTGGAATCTTTGATCCATGGATGT
                      ____________________________________________________________
consensus             CAAGGCACAGAGAGTTGATGCAAAAGTTAGAAGAAGTTGGAATCTTTGATCCATGGATGT
 
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JMSF037D11+           TTGTGATATGGAAGAGGCGTCAGACATGGCGGTTCAGAATGTCTCTGCTAAGCAACTGTC
                      ____________________________________________________________
consensus             TTGTGATATGGAAGAGGCGTCAGACATGGCGGTTCAGAATGTCTCTGCTAAGCAACTGTC