Contig 000870:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004O11Sequence571000870 (4)ref|XP_009602892.1|1e-89PREDICTED: protein ECERIFERUM 26-like [Nicotiana tomentosiformis]729005335 (5)ref|XP_009785032.1|2e-40PREDICTED: protein ECERIFERUM 26-like [Nicotiana sylvestris]
JMFF014K21Sequence157000870 (4)ref|XP_009602892.1|5e-21PREDICTED: protein ECERIFERUM 26-like [Nicotiana tomentosiformis]769005335 (5)ref|XP_009602892.1|2e-46PREDICTED: protein ECERIFERUM 26-like [Nicotiana tomentosiformis]
JMSF013F04Sequence262000870 (4)ref|XP_004247878.1|2e-33PREDICTED: protein ECERIFERUM 26-like [Solanum lycopersicum]767005335 (5)ref|XP_009602892.1|7e-57PREDICTED: protein ECERIFERUM 26-like [Nicotiana tomentosiformis]
JMSF036C08Sequence668000870 (4)ref|XP_006360967.1|4e-94PREDICTED: protein ECERIFERUM 26-like [Solanum tuberosum]741005335 (5)ref|XP_009602892.1|8e-62PREDICTED: protein ECERIFERUM 26-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF036C08+                                                               TCTAGAAC
                      ____________________________________________________________
consensus                                                                 TCTAGAAC
 
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JMSF036C08+           TTTCGGTAGTTCTTGATGGGCCGTTGCCTTAGTCAGTGATTGGGCCAAGTTCATGGGCTG
                      ____________________________________________________________
consensus             TTTCGGTAGTTCTTGATGGGCCGTTGCCTTAGTCAGTGATTGGGCCAAGTTCATGGGCTG
 
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JMFF004O11+                                       CCCAACATGTTCATGAACTCCGCAGCTGAGAA
JMFF014K21+                        CCGGCAACAACTTTTCCCAACATGTTCATGAACTCCGCAGCTGAGAA
JMSF036C08+           GGCCGGTTTGGTACCGGCAACAACTTTTCCCAACATGTTCATGAACTCCGCAGCTGAGAA
                      ____________________________________________________________
consensus             GGCCGGTTTGGTACCGGCAACAACTTTTCCCAACATGTTCATGAACTCCGCAGCTGAGAA
 
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JMFF004O11+           TACGTCACCAAGAACATGGGCCCAGGTCAGGCCCAATGCTACTCCACCGCACTTAAATTT
JMFF014K21+           TACGTCACCAAGAACATGGGCCCAGGTCAGGCCCAATGCTACTCCACCGCACTTAAATTT
JMSF036C08+           TACGTCACCAAGAACATGGGCCCAGGTCAGGCCCAATGCTACTCCACCGCACTTAAATTT
                      ____________________________________________________________
consensus             TACGTCACCAAGAACATGGGCCCAGGTCAGGCCCAATGCTACTCCACCGCACTTAAATTT
 
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JMFF004O11+           ATTATACTGAAAAAGAAGAGGCGGGGAGAAGAAAAGCTCGGGTCCGATGACCTGATTGGG
JMFF014K21+           ATTATACTGAAAAAGAAGAGGCGGGGAGAAGAAAAGCTCGGGTCCGATGA          
JMSF036C08+           ATTATACTGAAAAAGAAGAGGCGGGGAGAAGAAAAGCTCGGGTCAGATGACCTGATTGGG
                      ____________________________________________________________
consensus             ATTATACTGAAAAAGAAGAGGCGGGGAGAAGAAAAGCTCGGGTCCGATGACCTGATTGGG
 
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JMFF004O11+           AGTGAGGAGAGTCTCAAGGGCGGCGCCGGCGTCTCTCATCTGAAGCCACTCCTCCAAGCT
JMSF036C08+           AGTGAGGAGAGTCTCAAGGGCGGCGCCGGCGTCTCTCATCTGAAGCCACTCCTCCAAGCT
                      ____________________________________________________________
consensus             AGTGAGGAGAGTCTCAAGGGCGGCGCCGGCGTCTCTCATCTGAAGCCACTCCTCCAAGCT
 
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JMFF004O11+           CTTATCGCAGTAGGCCTCGACGAATCTGACGCCGCAGTCGTTGCACTTGATGTAGGGGCG
JMSF036C08+           CTTATCGCAGTAGGCCTCGACGAATCTGACGCCGCAGTCGTTGCACTTGATGTAGGGGCG
                      ____________________________________________________________
consensus             CTTATCGCAGTAGGCCTCGACGAATCTGACGCCGCAGTCGTTGCACTTGATGTAGGGGCG
 
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JMFF004O11+           GGCGGAGGCGTCGGCGCGGCGGAAGCGGCCGCAGGTCATGTAGTAGAGGTTGAAGAGCGT
JMSF013F04+                                          CAGGTCATGTAGTAGAGGTTGAAGAGCGT
JMSF036C08+           GGCGGAGGCGTCGGCGCGGCGGAAGCGGCCGCAGGTCATGTAGTAGAGGTTGAAGAGCGT
                      ____________________________________________________________
consensus             GGCGGAGGCGTCGGCGCGGCGGAAGCGGCCGCAGGTCATGTAGTAGAGGTTGAAGAGCGT
 
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JMFF004O11+           GAAGAGCGGCTCTTTGATGCTAATGACGGTGAGGCCTTCGAAGGCTTGGGCGTCGAAGTA
JMSF013F04+           GAAGAGCGGCTCTTTGATGCTAATGACGGTGAGGCCTTCGAAGGCTTGGGCGTCGAAGTA
JMSF036C08+           GAAGAGCGGCTCTTTGATGCTAATGACGGTGAGGCCTTCGAAGGCTTGGGCGTCGAAGTA
                      ____________________________________________________________
consensus             GAAGAGCGGCTCTTTGATGCTAATGACGGTGAGGCCTTCGAAGGCTTGGGCGTCGAAGTA
 
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JMFF004O11+           GTACACTCCTTTCAGGTAGTGAAGCTTCATCGCCAAGTCCAGGTTGCTCGGCTCGTAAAC
JMSF013F04+           GTACACTCCTTTCAGGTAGTGAAGCTTCATCGCCAAGTCCAGGTTGCTCGGCTCGTAAAC
JMSF036C08+           GTACACTCCTTTCAGGTAGTGAAGCTTCATCGCCAAGTCCAGGTTGCTCGGCTCGTAAAC
                      ____________________________________________________________
consensus             GTACACTCCTTTCAGGTAGTGAAGCTTCATCGCCAAGTCCAGGTTGCTCGGCTCGTAAAC
 
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JMFF004O11+           CACGTCTTGCCCCGTCACACTGCCCGGCCCTACCGACGACAGTTTCACGTTGTAGATTAG
JMSF013F04+           CACGTCTTGCCCCGTCACACTGCCCGGCCCTACCGACGACAGTTTCACGTTGTAGATTAG
JMSF036C08+           CACGTCTTGCCCCGTCACACTGCCCGGCCCTACCGACGACAGTTTCACGTTGTAGATTAG
                      ____________________________________________________________
consensus             CACGTCTTGCCCCGTCACACTGCCCGGCCCTACCGACGACAGTTTCACGTTGTAGATTAG
 
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JMFF004O11+           CGCCTCCGCCGACTCCGATGACACCATTTTCTTTGCTTTCTGTTCTGCTTT         
JMSF013F04+           CGCCTCCGCCGACTCCGATGACACCATTTTCTTTGCTTTCTGTTCTGCTTT         
JMSF036C08+           CGCCTCCGCCGACTCCGATGACACCATTTTCTTTGCTTTCTGTTCTGCTTTGGGGGTTTC
                      ____________________________________________________________
consensus             CGCCTCCGCCGACTCCGATGACACCATTTTCTTTGCTTTCTGTTCTGCTTTGGGGGTTTC