Contig 000867:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF035P04+               GGGATTTTCCATATTTACTCTCCCCTGATGACTTAGAAAGAAATAAAGAAAGACA
JMSF035P04-               GGGGATTTTCCATATTTACTCTCCCCTGATGACTTAGAAAGAAATAAAGAAAGACA
                      ____________________________________________________________
consensus                 GGGGATTTTCCATATTTACTCTCCCCTGATGACTTAGAAAGAAATAAAGAAAGACA
 
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rJMSF035P04+          GATTCATCATGCTGATATCTGCTATAAACTATGTTTCAGGAGCACTATATGTAAAGGGAG
JMSF035P04-           GATTCATCATGCTGATATCTGCTATAAACTATGTTTCAGGAGCACTATATGTAAAGGGAG
                      ____________________________________________________________
consensus             GATTCATCATGCTGATATCTGCTATAAACTATGTTTCAGGAGCACTATATGTAAAGGGAG
 
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rJMSF035P04+          CAGACACCCGAGAAAGACGAAACATTACAGGAAGAGTGAAGGCGCAAGGCAGGAGAGAGC
JMSF035P04-           CAGACACCCGAGAAAGACGAAACATTACAGGAAGAGTGAAGGCGCAAGGCAGGAGAGAGC
                      ____________________________________________________________
consensus             CAGACACCCGAGAAAGACGAAACATTACAGGAAGAGTGAAGGCGCAAGGCAGGAGAGAGC
 
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rJMSF035P04+          TTCTCTTTTCGACATTAGCAGCTGTCGAAATCAGTGACTCCAAAACCGAGCTTCTTAACA
JMSF035P04-           TTCTCTTTTCGACATTAGCAGCTGTCGAAATCAGTGACTCCAAAACCGAGCTTCTTAACA
                      ____________________________________________________________
consensus             TTCTCTTTTCGACATTAGCAGCTGTCGAAATCAGTGACTCCAAAACCGAGCTTCTTAACA
 
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rJMSF035P04+          GTAAACTAAACTATCTGCTCTGTGTATATTCTCGTGTTTCACCGTTACTTCTTAGCTTTG
JMSF035P04-           GTAAACTAAACTATCTGCTCTGTGTATATTCTCGTGTTTCACCGTTACTTCTTAGCTTTG
                      ____________________________________________________________
consensus             GTAAACTAAACTATCTGCTCTGTGTATATTCTCGTGTTTCACCGTTACTTCTTAGCTTTG
 
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rJMSF035P04+          GCCTTTGGGTTCGTGTTTTCTCACGTTTTAAAACATTGGAAACGCTTTTTGTCAGAGTTT
JMSF035P04-           GCCTTTGGGTTCGTGTTTTCTCACGTTTTAAAACATTGGAAACGCTTTTTGTCAGAGTTT
                      ____________________________________________________________
consensus             GCCTTTGGGTTCGTGTTTTCTCACGTTTTAAAACATTGGAAACGCTTTTTGTCAGAGTTT
 
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rJMSF035P04+          TTAAAGAAATCTGAAGAGAACAAGGAGAAAAATGACAAGGAGAGGCTGGAGAGCTACTAT
JMSF035P04-           TTAAAGAAATCTGAAGAGAACAAGGAGAAAAATGACAAGGAGAGGCTGGAGAGCTACTAT
                      ____________________________________________________________
consensus             TTAAAGAAATCTGAAGAGAACAAGGAGAAAAATGACAAGGAGAGGCTGGAGAGCTACTAT
 
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rJMSF035P04+          AAGCGCAACTACAAAGACTATTTTGGTGTGTTAGAAGGGACTCTGAGGCAAAAGTTGGAA
JMSF035P04-           AAGCGCAACTACAAAGACTATTTTGGTGTGTTAGAAGGGACTCTGAGGCAAAAGTTGGAA
                      ____________________________________________________________
consensus             AAGCGCAACTACAAAGACTATTTTGGTGTGTTAGAAGGGACTCTGAGGCAAAAGTTGGAA
 
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rJMSF035P04+          AACAAAGAGCAAATTTCTGAATCAGAGCAGAAGATTCTTGAATGGCTTGACAAAAACAAG
JMSF035P04-           AACAAAGAGCAAATTTCTGAATCAGAGCAGAAGATTCTTGAATGGCTTGACAAAAACAAG
                      ____________________________________________________________
consensus             AACAAAGAGCAAATTTCTGAATCAGAGCAGAAGATTCTTGAATGGCTTGACAAAAACAAG
 
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rJMSF035P04+          TAAATTACTATGACTAGATGTAAGGGAATATGTCTGTTCAGATAAATCTTGTGTTTCGAA
JMSF035P04-           TAAATTACTATGACTAGATGTAAGGGAATATGTCTGTTCAGATAAATCTTGTGTTTCGAA
                      ____________________________________________________________
consensus             TAAATTACTATGACTAGATGTAAGGGAATATGTCTGTTCAGATAAATCTTGTGTTTCGAA
 
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rJMSF035P04+          GCAAAGTTAAAGCATT                                            
JMSF035P04-           GCAAAGTTAAAGCATTTGAAATGCAGAGATAGAGCAATCAAGAACATTGGCACCAAAAGA
                      ____________________________________________________________
consensus             GCAAAGTTAAAGCATTTGAAATGCAGAGATAGAGCAATCAAGAACATTGGCACCAAAAGA