Contig 000866:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF025O05+                                                                     GA
                      ____________________________________________________________
consensus                                                                       GA
 
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JMSF025O05+           ACCTTGCTGCTGCAGACCTAACACCACTGCTGGCCCCAAAACTTGACTGTGATTGTGCAT
                      ____________________________________________________________
consensus             ACCTTGCTGCTGCAGACCTAACACCACTGCTGGCCCCAAAACTTGACTGTGATTGTGCAT
 
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JMFS145B05+                                            CCTGAGTAAAGGTTTTGGCCTGGGACT
JMSF025O05+           GCATTGGCTTGTCTTTAAGATGAGCAAGGGTTGCCTGAGTAAAGGTTTTGGCCTGGGACT
JMSF035O17+                                            CCTGAGTAAAGGTTTTGGCCTGGGACT
                      ____________________________________________________________
consensus             GCATTGGCTTGTCTTTAAGATGAGCAAGGGTTGCCTGAGTAAAGGTTTTGGCCTGGGACT
 
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JMFS145B05+           GGGTCTGGCCATATTGAGTATAACCAGTAGGGTAAGTTTTCTCGTACTGGAGCTTGTACC
JMSF025O05+           GGGTCTGGCCATATTGAGTATAACCAGTAGGGTAAGTTTTCTCGTACTGGAGCTTGTACC
JMSF035O17+           GGGTCTGGCCATATTGAGTATAACCAGTAGGGTAAGTTTTCTCGTACTGGAGCTTGTACC
                      ____________________________________________________________
consensus             GGGTCTGGCCATATTGAGTATAACCAGTAGGGTAAGTTTTCTCGTACTGGAGCTTGTACC
 
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JMFS145B05+           TCCCCTCTGGGGTCTTGAAATGCGTCTTCAGACCAGGCGATTGCGCGTTATTCCCAGATG
JMSF025O05+           TCCCCTCTGGGGTCTTGAAATGCGTCTTCAGACCAGGCGATTGCGCGTTATTCCCAGATG
JMSF035O17+           TCCCCTCTGGGGTCTTGAAATGCGTCTTCAGACCAGGCGATTGCGCGTTATTCCCAGATG
                      ____________________________________________________________
consensus             TCCCCTCTGGGGTCTTGAAATGCGTCTTCAGACCAGGCGATTGCGCGTTATTCCCAGATG
 
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JMFS145B05+           TAGACGACGACGACGCCATCATACTATTACTCCCCGCAGAGTTGATCATCCTCGCAAAAA
JMSF025O05+           TAGACGACGACGACGCCATCATACTATTACTCCCCGCAGAGTTGATCATCCTCGCAAAAA
JMSF035O17+           TAGACGACGACGACGCCATCATACTATTACTCCCCGCAGAGTTGATCATCCTCGCAAAAA
                      ____________________________________________________________
consensus             TAGACGACGACGACGCCATCATACTATTACTCCCCGCAGAGTTGATCATCCTCGCAAAAA
 
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JMFS145B05+           CAAACAAACAAACACCAATCAAAGGCTCTTTATCTTTAACTCCCCCGTCCGCGTCCAAAT
JMSF025O05+           CAAACAAACAAACACCAATCAAAGGCTCTTTATCTTTAACTCCCCCGTCCGCGTCCAAAT
JMSF035O17+           CAAACAAACAAACACCAATCAAAGGCTCTTTATCTTTAACTCCCCCGTCCGCGTCCAAAT
                      ____________________________________________________________
consensus             CAAACAAACAAACACCAATCAAAGGCTCTTTATCTTTAACTCCCCCGTCCGCGTCCAAAT
 
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JMFS145B05+           ATGCAAATGAGATCGTCCGGGGCTAACTTTGCCTTGCGTATCTCCCGGGCTCTTTGCTAA
JMSF025O05+           ATGCAAATGAGATCGTCCGGGGCTAACTTTGCCTTGCGTATCTCCCGGGCTCTTTGCTAA
JMSF035O17+           ATGCAAATGAGATCGTCCGGGGCTAACTTTGCCTTGCGTATCTCCCGGGCTCTTTGCTAA
                      ____________________________________________________________
consensus             ATGCAAATGAGATCGTCCGGGGCTAACTTTGCCTTGCGTATCTCCCGGGCTCTTTGCTAA
 
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JMFS145B05+           ATTGCTAATCGTGGATCATGAATATCGGAGCAGGGTAGGGGGCAGAGATTTGGCGGAGGG
JMSF025O05+           ATTGCTAATCGTGGATCATGAATATCGGAGCAGGGTAGGGGGCAGAGATTTGGCGGAGGG
JMSF035O17+           ATTGCTAATCGTGGATCATGAATATCGGAGCAGGGTAGGGGGCAGAGATTTGGCGGAGGG
                      ____________________________________________________________
consensus             ATTGCTAATCGTGGATCATGAATATCGGAGCAGGGTAGGGGGCAGAGATTTGGCGGAGGG
 
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JMFS145B05+           TGGGGATTGACTCTTGAGGAGGTTTCGTCGAAGCGATGGGCGGTTGGGATTCAACTGGCG
JMSF025O05+           TGGGGATTGACTCTTGAGGAGGTTTCGTCGAAGCGATGGGCGGTTGGGATTCAACTGGCG
JMSF035O17+           TGGGGATTGACTCTTGAGGAGGTTTCGTCGAAGCGATGGGCGGTTGGGATTCAACTGGCG
                      ____________________________________________________________
consensus             TGGGGATTGACTCTTGAGGAGGTTTCGTCGAAGCGATGGGCGGTTGGGATTCAACTGGCG
 
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JMFS145B05+           GTCTTGACTTGTATGTTGTTGCTTCTTTGTTCTTGGTTTTGGGGAGTTTGGGAATGGTCA
JMSF025O05+           GTCTTGACTTGTATGTTGTTGCTTCTTTGTTCTTGGTTTTGGGGAGTTTGGGAATGGTCA
JMSF035O17+           GTCTTGACTTGTATGTTGTTGCTTCTTTGTTCTTGGTTTTGGGGAGTTTGGGAATGGTCA
                      ____________________________________________________________
consensus             GTCTTGACTTGTATGTTGTTGCTTCTTTGTTCTTGGTTTTGGGGAGTTTGGGAATGGTCA
 
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JMFS145B05+           GATTCACCTTCGGGAGCTTCAAAGAA                                  
JMSF025O05+           GATTCACCTTCGGGAGCTTCAAAGAACACACAAGAATACCATCAATTTTGCAGTCCAG  
JMSF035O17+           GATTCACCTTCGGGAGCTTCAAAGAACACACAAGAATACCATCAATTTTGCAGTCCAGCC
                      ____________________________________________________________
consensus             GATTCACCTTCGGGAGCTTCAAAGAACACACAAGAATACCATCAATTTTGCAGTCCAGCC