Contig 000865:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF035L20Sequence658000865 (2)emb|CDP01863.1|2e-29unnamed protein product [Coffea canephora]758023577ref|XP_009611040.1|105PREDICTED: uncharacterized protein LOC104104610 [Nicotiana tomentosiformis]
JMSF040B07Sequence661000865 (2)emb|CDP01863.1|2e-29unnamed protein product [Coffea canephora]492017235ref|XP_011071503.1|2e-48PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich SC35-like splicing factor

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF040B07+ A
                      ____________________________________________________________
consensus A
 
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JMSF040B07+ GTGTCAACAGAGCTTTTGGTCCAAAATGCAAATATATATGAATCCAATACCTCCCATCTT
JMSF035L20+ GTCAACAGAGCTTTTGGTCCAAAATGCAAATATATATGAATCCAATACCTCCCATCTT
                      ____________________________________________________________
consensus GTGTCAACAGAGCTTTTGGTCCAAAATGCAAATATATATGAATCCAATACCTCCCATCTT
 
. : . : . : . : . : . :
JMSF040B07+ GCCACATTATCAAGTTGATATATCTTTAGAGTTCTGCTTGTAGCAGGCTCAAGTATTCTA
JMSF035L20+ GCCACATTATCAAGTTGATATATCTTTAGAGTTCTGCTTGTAGCAGGCTCAAGTATTCTA
                      ____________________________________________________________
consensus GCCACATTATCAAGTTGATATATCTTTAGAGTTCTGCTTGTAGCAGGCTCAAGTATTCTA
 
. : . : . : . : . : . :
JMSF040B07+ ATCCCATCAAGTCCAATCTGACATAGCACGTCCATGTCAGTCTGGCCATGGAAAACTCTC
JMSF035L20+ ATCCCATCAAGTCCAATCTGACATAGCACGTCCATGTCAGTCTGGCCATGGAAAACTCTC
                      ____________________________________________________________
consensus ATCCCATCAAGTCCAATCTGACATAGCACGTCCATGTCAGTCTGGCCATGGAAAACTCTC
 
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JMSF040B07+ AGAACCCTTCTATTCCTTCCCACCTGGAATATTAATAGGTCGTCCATAATCATCAAATAA
JMSF035L20+ AGAACCCTTCTATTCCTTCCCACCTGGAATATTAATAGGTCGTCCATAATCATCAAATAA
                      ____________________________________________________________
consensus AGAACCCTTCTATTCCTTCCCACCTGGAATATTAATAGGTCGTCCATAATCATCAAATAA
 
. : . : . : . : . : . :
JMSF040B07+ CACTTCACTGGATAACTCCGATCTACTACCACCATATGTATCGGCTTTTCCCAGCCGGTG
JMSF035L20+ CACTTCACTGGATAACTCCGATCTACTACCACCATATGTATCGGCTTTTCCCAGCCGGTG
                      ____________________________________________________________
consensus CACTTCACTGGATAACTCCGATCTACTACCACCATATGTATCGGCTTTTCCCAGCCGGTG
 
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JMSF040B07+ CCTTTTTAGAATTACTCCACTGATTGCTCATCTGAAATCAACACAGAAAAAAGTCAAGAA
JMSF035L20+ CCTTTTTAGAATTACTCCACTGATTGCTCATCTGAAATCAACACAGAAAAAAGTCAAGAA
                      ____________________________________________________________
consensus CCTTTTTAGAATTACTCCACTGATTGCTCATCTGAAATCAACACAGAAAAAAGTCAAGAA
 
. : . : . : . : . : . :
JMSF040B07+ CTCCACACTAACACTTACGAACCTATACATCCGCACAGGTGCGTAAAAATAACTATCACA
JMSF035L20+ CTCCACACTAACACTTACGAACCTATACATCCGCACAGGTGCGTAAAAATAACTATCACA
                      ____________________________________________________________
consensus CTCCACACTAACACTTACGAACCTATACATCCGCACAGGTGCGTAAAAATAACTATCACA
 
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JMSF040B07+ TAAAGAATTTAGGGATTAATGAAATTATGATTTAGGGATAAATAGAATTAAGATTTTAGG
JMSF035L20+ TAAAGAATTTAGGGATTAATGAAATTATGATTTAGGGATAAATAGAATTAAGATTTTAGG
                      ____________________________________________________________
consensus TAAAGAATTTAGGGATTAATGAAATTATGATTTAGGGATAAATAGAATTAAGATTTTAGG
 
. : . : . : . : . : . :
JMSF040B07+ GATTAGGGTTTAAGATTTGAGTAATAGAACTTGTAGCGCAGCAGAGACGGCGATGTCGAC
JMSF035L20+ GATTAGGGTTTAAGATTTGAGTAATAGAACTTGTAGCGCAGCAGAGACGGCGATGTCGAC
                      ____________________________________________________________
consensus GATTAGGGTTTAAGATTTGAGTAATAGAACTTGTAGCGCAGCAGAGACGGCGATGTCGAC
 
. : . : . : . : . : . :
JMSF040B07+ GAGCGATTTTGACGGCAAACACCCAGGCGTTGGGAATGATTGTCGCGACGTTGGAGTCTT
JMSF035L20+ GAGCGATTTTGACGGCAAACACCCAGGCGTTGGGAATGATTGTCGCGACGTTGGAGTCTT
                      ____________________________________________________________
consensus GAGCGATTTTGACGGCAAACACCCAGGCGTTGGGAATGATTGTCGCGACGTTGGAGTCTT
 
. : . : . : . : . : . :
JMSF040B07+ GGGCATTTTTCTTGTAGTAAGCGGTAGGCGACGGATTTAGGTTTTGGAGATGGAGGA
JMSF035L20+ GGGCATTTTTCTTGTAGTAAGCGGTAGGCGACGGATTTAGGTTTTGGAGATGGAGGAGCC
                      ____________________________________________________________
consensus GGGCATTTTTCTTGTAGTAAGCGGTAGGCGACGGATTTAGGTTTTGGAGATGGAGGAGCC