Contig 000863:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026C21Sequence558000863 (3)ref|XP_008812364.1|2e-57PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix dactylifera]735004033 (3)
JMFS022C04Sequence610000863 (3)ref|XP_008812364.1|2e-81PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix dactylifera]
JMSF035K12Sequence647000863 (3)ref|XP_008812364.1|5e-70PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Phoenix dactylifera]740004033 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS022C04+ TAATACCTACCCTCTTGATAGGACCATAAGCCTCAAATTCTCT
                      ____________________________________________________________
consensus TAATACCTACCCTCTTGATAGGACCATAAGCCTCAAATTCTCT
 
. : . : . : . : . : . :
JMFS022C04+ TTTGATTTTGTTNTCAGTCGTCTCATAGTTAAGTCTAGCTACAAAAAGTGTCTTGTATGG
JMSF035K12+ TCAGTCGTCTCATAGTTAAGTCTAGCTACAAAAAGTGTCTTGTATGG
                      ____________________________________________________________
consensus TTTGATTTTGTTNTCAGTCGTCTCATAGTTAAGTCTAGCTACAAAAAGTGTCTTGTATGG
 
. : . : . : . : . : . :
JMFS022C04+ ATCTCCAGTAGCATTGGGGTCATTATTTGGATCATATTTCTCAAGCTCTTCAGCAACCTT
JMFF026C21+ TCTCCAGTAGCATTGGGGTCATTATTTGGATCATATTTCTCAAGCTCTTCAGCAACCTT
JMSF035K12+ ATCTCCAGTAGCATTGGGGTCATTATTTGGATCATATTTCTCAAGCTCTTCAGCAACCTT
                      ____________________________________________________________
consensus ATCTCCAGTAGCATTGGGGTCATTATTTGGATCATATTTCTCAAGCTCTTCAGCAACCTT
 
. : . : . : . : . : . :
JMFS022C04+ TTTTGCACCCTCTTCCAGTCGTATCTTGTGGACCCTAGCTCTTCTTTGTGCCCGAGTTTC
JMFF026C21+ TTTTGCACCCTCTTCCAGTCGTATCTTGTGGACCCTAGCTCTTCTTTGTGCCCGAGTTTC
JMSF035K12+ TTTTGCACCCTCTTCCAGTCGTATCTTGTGGACCCTAGCTCTTCTTTGTGCCCGAGTTTC
                      ____________________________________________________________
consensus TTTTGCACCCTCTTCCAGTCGTATCTTGTGGACCCTAGCTCTTCTTTGTGCCCGAGTTTC
 
. : . : . : . : . : . :
JMFS022C04+ AACCTCCTCGATAGGTGGAGCATATTCTGGATCACCAGGCTCAGCCAAATTACTAACAAA
JMFF026C21+ AACCTCCTCGATAGGTGGAGCATATTCTGGATCACCAGGCTCAGCCAAATTACTAACAAA
JMSF035K12+ AACCTCCTCGATAGGTGGAGCATATTCTGGATCACCAGGCTCAGCCAAATTACTAACAAA
                      ____________________________________________________________
consensus AACCTCCTCGATAGGTGGAGCATATTCTGGATCACCAGGCTCAGCCAAATTACTAACAAA
 
. : . : . : . : . : . :
JMFS022C04+ TTGTGCCATACCTGTATATGGAAGGCATTTTCTCTTCTCAGGAGGTGGTTTAAATTCCAA
JMFF026C21+ TTGTGCCATACCTGTATATGGAAGGCATTTTCTCTTCTCAGGAGGTGGTTTAAATTCCAA
JMSF035K12+ TTGTGCCATACCTGTATATGGAAGGCATTTTCTCTTCTCAGGAGGTGGTTTAAATTCCAA
                      ____________________________________________________________
consensus TTGTGCCATACCTGTATATGGAAGGCATTTTCTCTTCTCAGGAGGTGGTTTAAATTCCAA
 
. : . : . : . : . : . :
JMFS022C04+ AGGCGGGCGAGGCTCAAACAGCTTTAGCAGATTAGCTGTCAAACCAGTCGGGTGACTTTG
JMFF026C21+ AGGCGGGCGAGGCTCAAACAGCTTTAGCAGATTAGCTGTCAAACCAGTCGGGTGACTTTG
JMSF035K12+ AGGCGGGCGAGGCTCAAACAGCTTTAGCAGATTAGCTGTCAAACCAGTCGGGTGACTTTG
                      ____________________________________________________________
consensus AGGCGGGCGAGGCTCAAACAGCTTTAGCAGATTAGCTGTCAAACCAGTCGGGTGACTTTG
 
. : . : . : . : . : . :
JMFS022C04+ ACCAATCAGCTTGAGTTGCACGATATTGACGCGGTTCTGGGCCTTGGTCCTGGCCTGAAC
JMFF026C21+ ACCAATCAGCTTGAGTTGCACGATATTGACGCGGTTCTGGGCCTTGGTCCTGGCCTGAAC
JMSF035K12+ ACCAATCAGCTTGAGTTGCACGATATTGACGCGGTTCTGGGCCTTGGTCCTGGCCTGAAC
                      ____________________________________________________________
consensus ACCAATCAGCTTGAGTTGCACGATATTGACGCGGTTCTGGGCCTTGGTCCTGGCCTGAAC
 
. : . : . : . : . : . :
JMFS022C04+ GGCGGCGCTGTTG
JMFF026C21+ GGCGGCGCTGTTG
JMSF035K12+ GGCGGCGCTGTTGTTGTTACGCATGAAGGCATCGTTGTGGTCTCCCATCGTCGATTAAGC
                      ____________________________________________________________
consensus GGCGGCGCTGTTGTTGTTACGCATGAAGGCATCGTTGTGGTCTCCCATCGTCGATTAAGC
 
. : . : . : . : . : . :
JMSF035K12+ CTAGTGCCTCAAAAAGTATCGAATGCTCGCTCTTCGATTACACTGACGGGAAGGCGAAGA
                      ____________________________________________________________
consensus CTAGTGCCTCAAAAAGTATCGAATGCTCGCTCTTCGATTACACTGACGGGAAGGCGAAGA
 
. : . : . : . : . : . :
JMSF035K12+ TCACTTGCATCGATTAATTTCGAGAGATTCCCACCGTAAGTTTTCGCGAGGGCTAGTCGG
                      ____________________________________________________________
consensus TCACTTGCATCGATTAATTTCGAGAGATTCCCACCGTAAGTTTTCGCGAGGGCTAGTCGG
 
. : . : . : . : . : . :
JMSF035K12+ CAAATGGAGAAATCAACACGGAAGAAGACGTTTTGGTTTTTTCTTCTTTTTACAATAATC
                      ____________________________________________________________
consensus CAAATGGAGAAATCAACACGGAAGAAGACGTTTTGGTTTTTTCTTCTTTTTACAATAATC