Contig 000853:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF034I18Sequence619000853 (2)ref|XP_009613304.1|1e-16PREDICTED: non-specific lipid-transfer protein-like [Nicotiana tomentosiformis]562000853 (2)ref|XP_009613304.1|7e-17PREDICTED: non-specific lipid-transfer protein-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF034I18+ GGAAACTTGAGCCCAAATA
JMSF034I18- GGAAACTTGAGCCCAAATA
                      ____________________________________________________________
consensus GGAAACTTGAGCCCAAATA
 
. : . : . : . : . : . :
rJMSF034I18+ AGTGATCAGTGCAAGCTAGCCATTACCCCACTCTTGTTCTTGATCATGAGGCCTTCAAAC
JMSF034I18- AGTGATCAGTGCAAGCTAGCCATTACCCCACTCTTGTTCTTGATCATGAGGCCTTCAAAC
                      ____________________________________________________________
consensus AGTGATCAGTGCAAGCTAGCCATTACCCCACTCTTGTTCTTGATCATGAGGCCTTCAAAC
 
. : . : . : . : . : . :
rJMSF034I18+ CAAACTTTGGCTCTCTGTGTGGTTCTTCTCTTGGTTGCAGCACCGGTTTCTCGGGCTGCA
JMSF034I18- CAAACTTTGGCTCTCTGTGTGGTTCTTCTCTTGGTTGCAGCACCGGTTTCTCGGGCTGCA
                      ____________________________________________________________
consensus CAAACTTTGGCTCTCTGTGTGGTTCTTCTCTTGGTTGCAGCACCGGTTTCTCGGGCTGCA
 
. : . : . : . : . : . :
rJMSF034I18+ GTTACCTGTGGCAGTGTGCTGAGCACCCTGAAGCCTTGCATTAGCTACCTGCAAGGCGGT
JMSF034I18- GTTACCTGTGGCAGTGTGCTGAGCACCCTGAAGCCTTGCATTAGCTACCTGCAAGGCGGT
                      ____________________________________________________________
consensus GTTACCTGTGGCAGTGTGCTGAGCACCCTGAAGCCTTGCATTAGCTACCTGCAAGGCGGT
 
. : . : . : . : . : . :
rJMSF034I18+ GGGGGGCCGTCGCCCCCGGGGACGTGCTGTGGTGGAGTCAAGAGCCTTGCAAGTGCTGCA
JMSF034I18- GGGGGGCCGTCGCCCCCGGGGACGTGCTGTGGTGGAGTCAAGAGCCTTGCAAGTGCTGCA
                      ____________________________________________________________
consensus GGGGGGCCGTCGCCCCCGGGGACGTGCTGTGGTGGAGTCAAGAGCCTTGCAAGTGCTGCA
 
. : . : . : . : . : . :
rJMSF034I18+ TCATCCAAGCCAGACAAGCAGACTGCCTGTGGGTGCCTCAAGACTGCAGCCCAGAAGCTG
JMSF034I18- TCATCCAAGCCAGACAAGCAGACTGCCTGTGGGTGCCTCAAGACTGCAGCCCAGAAGCTG
                      ____________________________________________________________
consensus TCATCCAAGCCAGACAAGCAGACTGCCTGTGGGTGCCTCAAGACTGCAGCCCAGAAGCTG
 
. : . : . : . : . : . :
rJMSF034I18+ AAGGTCAACACCAACCGCGCCCAGACGCTCCCGCAGGACTGCGGCGTCTCCCTGTCGTTT
JMSF034I18- AAGGTCAACACCAACCGCGCCCAGACGCTCCCGCAGGACTGCGGCGTCTCCCTGTCGTTT
                      ____________________________________________________________
consensus AAGGTCAACACCAACCGCGCCCAGACGCTCCCGCAGGACTGCGGCGTCTCCCTGTCGTTT
 
. : . : . : . : . : . :
rJMSF034I18+ CCCATCTCGACTTCTATCGACTGCAGCACAATCAGCTAAGCTTGGAGAGAACAATGATGA
JMSF034I18- CCCATCTCGACTTCTATCGACTGCAGCACAATCAGCTAAGCTTGGAGAGAACAATGATGA
                      ____________________________________________________________
consensus CCCATCTCGACTTCTATCGACTGCAGCACAATCAGCTAAGCTTGGAGAGAACAATGATGA
 
. : . : . : . : . : . :
rJMSF034I18+ TATGATATGATATGATGCTGTTGAAAGCACTTATTACTGGGGAGGATAAGTAAATCTTAT
JMSF034I18- TATGATATGATATGATGCTGTTGAAAGCACTTATTACTGGGGAGGATAAGTAAATCTTAT
                      ____________________________________________________________
consensus TATGATATGATATGATGCTGTTGAAAGCACTTATTACTGGGGAGGATAAGTAAATCTTAT
 
. : . : . : . : . : . :
rJMSF034I18+ AATAATGTAAAAGTTGGAATGTTTGTGTCTTTTTATCATTAATATATCACTCTAGAGTTG
JMSF034I18- AATAATGTAAAAGTTGGAATGTTTGTGTCTTTTTATCATTAATATATCACTCTAGAGTTG
                      ____________________________________________________________
consensus AATAATGTAAAAGTTGGAATGTTTGTGTCTTTTTATCATTAATATATCACTCTAGAGTTG
 
. : . : . : . : . : . :
rJMSF034I18+ TGT
JMSF034I18- TGTTCCCTTCTTATATTTTCTATGGAATAAACTTTGTGTTTTCTCTTGACAAAAAAAAAA
                      ____________________________________________________________
consensus TGTTCCCTTCTTATATTTTCTATGGAATAAACTTTGTGTTTTCTCTTGACAAAAAAAAAA