Contig 000850:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034D04+                                          CGATCACAACCTTCCCTTCACCAACTGTC
                      ____________________________________________________________
consensus                                            CGATCACAACCTTCCCTTCACCAACTGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034D04+           AGCTCCTTTTTCTCGCTGTACCCTAATAGGTAAACTACACTACCTAGCTCAAGATTTGGT
                      ____________________________________________________________
consensus             AGCTCCTTTTTCTCGCTGTACCCTAATAGGTAAACTACACTACCTAGCTCAAGATTTGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034D04+           TTCGAACAGGTTTTCAGAAAATGAGGATGCTGAACCTGCCCATTCGTGTCTCCATCCATG
                      ____________________________________________________________
consensus             TTCGAACAGGTTTTCAGAAAATGAGGATGCTGAACCTGCCCATTCGTGTCTCCATCCATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034D04+           GCATCAAGGCCCACGATACTCAGATCAAGTATCGAGCTAGTAATAAAGAATCTGTGAGGG
                      ____________________________________________________________
consensus             GCATCAAGGCCCACGATACTCAGATCAAGTATCGAGCTAGTAATAAAGAATCTGTGAGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034D04+           AACAGGCACGCAGCGGCGCCGTTTTGGATGCGGATCTCGGCGGCCTCGGCTGCGGCGGCG
                      ____________________________________________________________
consensus             AACAGGCACGCAGCGGCGCCGTTTTGGATGCGGATCTCGGCGGCCTCGGCTGCGGCGGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034D04+           GAAGGGAGGTTGACGTGAGTGGTGAGGAGAAGATTGCGGTGGATCAAGAAGGCAGTGCCG
                      ____________________________________________________________
consensus             GAAGGGAGGTTGACGTGAGTGGTGAGGAGAAGATTGCGGTGGATCAAGAAGGCAGTGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF034D04+           CCACCGTTGCCGGCGGCGATTACCGCCATTGCCGGACCTTTGCTCGAGAAAATGGAAGCC
                      ____________________________________________________________
consensus             CCACCGTTGCCGGCGGCGATTACCGCCATTGCCGGACCTTTGCTCGAGAAAATGGAAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003K22+                               TCCGCCATTACAGAAACACCATGAATCTCGCAAAACCCCC
JMSF034D04+           TTCATTCTCTCGGACTTGCCTCCGCCATTACAGAAACACCATGAATCTCGCAAAACCCCC
                      ____________________________________________________________
consensus             TTCATTCTCTCGGACTTGCCTCCGCCATTACAGAAACACCATGAATCTCGCAAAACCCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003K22+           ATTTCCCAGGAGCTGCTCTAAATCCTTTTCCTGAATTTAAACTAAACAACAACAACAACA
JMSF034D04+           ATTTCCCAGGAGCTGCTCTAAATCCTTTTCCTGAATTTAAACTAAACAACAACAACAACA
                      ____________________________________________________________
consensus             ATTTCCCAGGAGCTGCTCTAAATCCTTTTCCTGAATTTAAACTAAACAACAACAACAACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003K22+           ACAACAACAAAAATAGTTCCGGGAATTTTAGATCCAGAATATCAGCTGGAAATGCATTCT
JMSF034D04+           ACAACAACAAAAATAGTTCCGGGAATTTTAGATCCAGAATATCAGCTGGAAATGCATTCT
                      ____________________________________________________________
consensus             ACAACAACAAAAATAGTTCCGGGAATTTTAGATCCAGAATATCAGCTGGAAATGCATTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003K22+           TTCTAGTGCAGCTCAGTTTCCTCCGAGCTCTTCCTGGACAGTGTATAATTGCTCTCAGCG
JMSF034D04+           TTCTAGTGCAGCTCAGTTTCCTCCGAGCTCTTCCTGGACAGTGTATAATTGCTCTCAGCG
                      ____________________________________________________________
consensus             TTCTAGTGCAGCTCAGTTTCCTCCGAGCTCTTCCTGGACAGTGTATAATTGCTCTCAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF003K22+           ACAGATAGAGACGTAGAGAGAGCAAAAACAGGAGAGAGAACGAAGAAGACGACTTCTCTC
JMSF034D04+           ACAGATAGAGACGTAGAGAGAGCAAAAACAGGAGAGAGAACGAAGAAGACGACTTCTCTC
                      ____________________________________________________________
consensus             ACAGATAGAGACGTAGAGAGAGCAAAAACAGGAGAGAGAACGAAGAAGACGACTTCTCTC