Contig 000845:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS129B08Sequence615000845 (4)emb|CDP02401.1|5e-39unnamed protein product [Coffea canephora]
JMSF009N09Sequence161000845 (4)737005738 (4)emb|CDP02401.1|2e-94unnamed protein product [Coffea canephora]
JMSF033N01Sequence609000845 (4)emb|CDP02401.1|3e-35unnamed protein product [Coffea canephora]713005738 (4)ref|XP_009621362.1|7e-59PREDICTED: translation initiation factor eIF-2B subunit delta-like isoform X2 [
JMSF037M06Sequence639000845 (4)emb|CDP02401.1|8e-51unnamed protein product [Coffea canephora]726005738 (4)emb|CDP02401.1|1e-91unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037M06+ CGTTCACAATGGAAACTGTGGTTAAACCAGCAGAGCGAAAGCTGTTGTTCTGCTTAGC
                      ____________________________________________________________
consensus CGTTCACAATGGAAACTGTGGTTAAACCAGCAGAGCGAAAGCTGTTGTTCTGCTTAGC
 
. : . : . : . : . : . :
JMSF037M06+ GCCCGTCATGTCGAATCCACCAGTAGGAAGCGAGGTCGCGAACTTTCCAGAATCTCCCTT
JMFS129B08+ CAGTAGGAAGCGAGGTCGCGAACTTTCCAGAATCTCCCTT
JMSF033N01+ ATCTCCCTT
                      ____________________________________________________________
consensus GCCCGTCATGTCGAATCCACCAGTAGGAAGCGAGGTCGCGAACTTTCCAGAATCTCCCTT
 
. : . : . : . : . : . :
JMSF037M06+ GCCAGCTCGGCTCAGCGAAAGAGCATCCTCGGTGAAGTCAGACGCAGTAGGGGAAGTGAA
JMFS129B08+ GCCAGCTCGGCTCAGCGAAAGAGCATCCTCGGTGAAGTCAGACGCAGTAGGGGAAGTGAA
JMSF033N01+ GCCAGCTCGGCTCAGCGAAAGAGCATCCTCGGTGAAGTCAGACGCAGTAGGGGAAGTGAA
                      ____________________________________________________________
consensus GCCAGCTCGGCTCAGCGAAAGAGCATCCTCGGTGAAGTCAGACGCAGTAGGGGAAGTGAA
 
. : . : . : . : . : . :
JMSF037M06+ TTCCGAGGGATTGTAGCTGCCGACCGGGATGGAGTCGCGGTGGAGCGGGGACGGGGAGAG
JMFS129B08+ TTCCGAGGGATTGTAGCTGCCGACCGGGATGGAGTCGCGGTGGAGCGGGGACGGGGAGAG
JMSF033N01+ TTCCGAGGGATTGTAGCTGCCGACCGGGATGGAGTCGCGGTGGAGCGGGGACGGGGAGAG
                      ____________________________________________________________
consensus TTCCGAGGGATTGTAGCTGCCGACCGGGATGGAGTCGCGGTGGAGCGGGGACGGGGAGAG
 
. : . : . : . : . : . :
JMSF037M06+ CGGAACCGGAGGGAAGTGAGCCGCCGCGCGAGAGAGGTCAGACGACAAGTGGCGCGGCGG
JMFS129B08+ CGGAACCGGAGGGAAGTGAGCCGCCGCGCGAGAGAGGTCAGACGACAAGTGGCGCGGCGG
JMSF033N01+ CGGAACCGGAGGGAAGTGAGCCGCCGCGCGAGAGAGGTCAGACGACAAGTGGCGCGGCGG
                      ____________________________________________________________
consensus CGGAACCGGAGGGAAGTGAGCCGCCGCGCGAGAGAGGTCAGACGACAAGTGGCGCGGCGG
 
. : . : . : . : . : . :
JMSF037M06+ CGGAATCATCACGGGAGACAGCGAGTTACCGGACGGGGATATATCGGATACGGGCGGAGA
JMFS129B08+ CGGAATCATCACGGGAGACAGCGAGTTACCGGACGGGGATATATCGGATACGGGCGGAGA
JMSF033N01+ CGGAATCATCACGGGAGACAGCGAGTTACCGGACGGGGATATATCGGATACGGGCGGAGA
                      ____________________________________________________________
consensus CGGAATCATCACGGGAGACAGCGAGTTACCGGACGGGGATATATCGGATACGGGCGGAGA
 
. : . : . : . : . : . :
JMSF037M06+ GGATGACGTTGGATCGGGCGGACCCGATTGGGAACGGTCCGGCGGGGCTCCGGGAGCGAA
JMFS129B08+ GGATGACGTTGGATCGGGCGGACCCGATTGGGAACGGTCCGGCGGGGCTCCGGGAGCGAA
JMSF033N01+ GGATGACGTTGGATCGGGCGGACCCGATTGGGAACGGTCCGGCGGGGCTCCGGGAGCGAA
                      ____________________________________________________________
consensus GGATGACGTTGGATCGGGCGGACCCGATTGGGAACGGTCCGGCGGGGCTCCGGGAGCGAA
 
. : . : . : . : . : . :
JMSF037M06+ GAACCCAACTTGACGGACCTTCGGGTCGCTCACGGCCCGCGAAACTCGGCGAGAGTCCAT
JMFS129B08+ GAACCCAACTTGACGGACCTTCGGGTCGCTCACGGCCCGCGAAACTCGGCGAGAGTCCAT
JMSF033N01+ GAACCCAACTTGACGGACCTTCGGGTCGCTCACGGCCCGCGAAACTCGGCGAGAGTCCAT
                      ____________________________________________________________
consensus GAACCCAACTTGACGGACCTTCGGGTCGCTCACGGCCCGCGAAACTCGGCGAGAGTCCAT
 
. : . : . : . : . : . :
JMSF037M06+ TGGATGGATGTCGCGTTGGAATGCGGCGATGATGCAATCGCGGGCGCTATAAGGCCATAC
JMFS129B08+ TGGATGGATGTCGCGTTGGAATGCGGCGATGATGCAATCGCGGGCGCTATAAGGCCATAC
JMSF033N01+ TGGATGGATGTCGCGTTGGAATGCGGCGATGATGCAATCGCGGGCGCTATAAGGCCATAC
                      ____________________________________________________________
consensus TGGATGGATGTCGCGTTGGAATGCGGCGATGATGCAATCGCGGGCGCTATAAGGCCATAC
 
. : . : . : . : . : . :
JMSF037M06+ GAAGGAAGGGGAGACGGGAGATAGAGAGAAGAAGTGGGGAATAGAGGAGAGAGATATCGG
JMFS129B08+ GAAGGAAGGGGAGACGGGAGATAGAGAGAAGAAGTGGGGAATAGAGGAGAGAGATATCGG
JMSF009N09+ GAAGGAAGGGGAGACNGGAGATAGAGAGAAGAAGTGGGGAATAGAGGAGAGAGATATCGG
JMSF033N01+ GAAGGAAGGGGAGACGGGAGATAGAGAGAAGAAGTGGGGAATAGAGGAGAGAGATATCGG
                      ____________________________________________________________
consensus GAAGGAAGGGGAGACGGGAGATAGAGAGAAGAAGTGGGGAATAGAGGAGAGAGATATCGG
 
. : . : . : . : . : . :
JMSF037M06+ CGGAGAGAACTAGGGTTTAGGTGGGCCGAAGAATCAAATC
JMFS129B08+ AGGAGAGAACTAGGGTTTAGGTGGGCCGAAGAATCAAATCGCGGTGGCGTTGGTGGTTTC
JMSF009N09+ CGGAGAGAACTAGGGTTTAGGTGGGCCGAAGAATCAAATCGCGGTGGCGTTGGTGGTTTC
JMSF033N01+ CGGAGAGAACTAGGGTTTAGGTGGGCCGAAGAATCAAATCGCGGTGGCGTTGGTGGTTTC
                      ____________________________________________________________
consensus CGGAGAGAACTAGGGTTTAGGTGGGCCGAAGAATCAAATCGCGGTGGCGTTGGTGGTTTC
 
. : . : . : . : . : . :
JMFS129B08+ AGGTGGAGGAGGGTTTTCGAGCAGTGATGGAGTTG
JMSF009N09+ AGGTGGAGGAGGGTTTTCGAGCAGTGATGGAGTTG
JMSF033N01+ AGGTGGAGGAGGGTTTTCGAGCAGTGATGGAGTTGGACTTGGGACCGCAGCCAAAATGTC
                      ____________________________________________________________
consensus AGGTGGAGGAGGGTTTTCGAGCAGTGATGGAGTTGGACTTGGGACCGCAGCCAAAATGTC