| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008O14 | Sequence | 569 | 000843 (7) | ref|NP_001266125.1| | 2e-37 | ERF6 [Solanum lycopersicum] gb|AEZ64000.1| ERF6 [Solanum lycopersicum] | 681 | 000843 (7) | emb|CAC12822.1| | 9e-16 | AP2 domain-containing transcription factor [Nicotiana tabacum] |
| JMFF009O14 | Sequence | 366 | 000843 (7) | ref|NP_001266125.1| | 3e-25 | ERF6 [Solanum lycopersicum] gb|AEZ64000.1| ERF6 [Solanum lycopersicum] | |||||
| JMFF014C13 | Sequence | 507 | 000843 (7) | ref|NP_001266125.1| | 9e-38 | ERF6 [Solanum lycopersicum] gb|AEZ64000.1| ERF6 [Solanum lycopersicum] | 650 | 000843 (7) | ref|XP_002272426.1| | 1e-07 | PREDICTED: ethylene-responsive transcription factor RAP2-3 [Vitis vinifera] emb |
| JMSF033H24 | Sequence | 679 | 000843 (7) | ref|XP_009597158.1| | 1e-38 | PREDICTED: ethylene-responsive transcription factor RAP2-3 [Nicotiana tomentosi | 654 | 000843 (7) | emb|CAC12822.1| | 5e-15 | AP2 domain-containing transcription factor [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMFF014C13- ATTATCGGCAAAATCCTAGGTTTAGAAAAACACAGGCACAAACGACAACGTCTT
rJMSF033H24- ACACAGGCACAAACGACAACGTCTT
rJMFF008O14- TATCGGCAAAATCCTAGGTTTAGAAAAACACAGGCACAAACGACAACGTCTT
____________________________________________________________
consensus ATTATCGGCAAAATCCTAGGTTTAGAAAAACACAGGCACAAACGACAACGTCTT
. : . : . : . : . : . :
rJMFF014C13- AGATCACATACGTCCGGATCACATACAACCGCGTGCACCTTATTATCATAGGCGGGAGTT
rJMSF033H24- AGATCACATACGTCCGGATCACATACAACCGCGTGCACCTTATTATCATAGGCGGGAGTT
rJMFF008O14- AGATCACATACGTCCGGATCACATACAACCGCGTGCACCTTATTATCATAGGCGGGAGTT
____________________________________________________________
consensus AGATCACATACGTCCGGATCACATACAACCGCGTGCACCTTATTATCATAGGCGGGAGTT
. : . : . : . : . : . :
rJMFF014C13- TAACGCCGTTAACAAACCATCAAACTCCGTCTTAGACTCTTAGGTATTAAGTACAACACT
rJMSF033H24- TAACGCCGTTAACAAACCATCAAACTCCGTCTTAGACTCTTAGGTATTAAGTACAACACT
rJMFF008O14- TAACGCCGTTAACAAACCATCAAACTCCGTCTTAGACTCTTAGGTATTAAGTACAACACT
____________________________________________________________
consensus TAACGCCGTTAACAAACCATCAAACTCCGTCTTAGACTCTTAGGTATTAAGTACAACACT
. : . : . : . : . : . :
rJMFF014C13- CCGAAAGGAAATCACAAATATTTATACACACAATATGTATGATCAGGGTACGGTGTAGAA
rJMSF033H24- CCGAAAGGAAATCACAAATATTTATACACACAATATGTATGATCAGGGTACGGTGTAGAA
rJMFF008O14- CCGAAAGGAAATCACAAATATTTATACACACAATATGTATGATCAGGGTACGGTGTAGAA
____________________________________________________________
consensus CCGAAAGGAAATCACAAATATTTATACACACAATATGTATGATCAGGGTACGGTGTAGAA
. : . : . : . : . : . :
rJMFF014C13- CACCTGGTGCTGCTGCGTAGCAGGGAAACATTCCTCCACGGGGCCCACCAGGAAGGGATC
rJMSF033H24- CACCTGGTGCTGCTGCGTAGCAGGGAAACATTCCTCCACGGGGCCCACCAGGAAGGGATC
rJMFF008O14- CACCTGGTGCTGCTGCGTAGCAGGGAAACATTCCTCCACGGGGCCCACCAGGAAGGGATC
____________________________________________________________
consensus CACCTGGTGCTGCTGCGTAGCAGGGAAACATTCCTCCACGGGGCCCACCAGGAAGGGATC
. : . : . : . : . : . :
rJMFF014C13- AAACGAGTCGAACTCGGCACCCAACTGAGTCGGCTCCGGTTCCAGTCCGAGGAACGATTC
rJMSF033H24- AAACGAGTCGAACTCGGCACCCAACTGAGTCGGCTCCGGTTCCAGTCCGAGGAACGATTC
rJMFF008O14- AAACGAGTCGAACTCGGCACCCAACTGAGTCGGCTCCGGTTCCAGTCCGAGGAACGATTC
JMSF033H24+ TCCAGTCCGAGGAACGATTC
____________________________________________________________
consensus AAACGAGTCGAACTCGGCACCCAACTGAGTCGGCTCCGGTTCCAGTCCGAGGAACGATTC
. : . : . : . : . : . :
rJMFF014C13- CAAGTCTGATATCTGAACCTTAAACTCGGATCCGCCCTGGTTATGGTGGCCGTCCGCCGC
rJMSF033H24- CAAGTCTGATATCTGAACCTTAAACTCGGATCCGCCCTGGTTATGGTGGCCGTCCGCCGC
rJMFF008O14- CAAGTCTGATATCTGAACCTTAAACTCGGATCCGCCCTGGTTATGGTGGCCGTCCGCCGC
JMSF033H24+ CAAGTCTGATATCTGAACCTTAAACTCGGATCCGCCCTGGTTATGGTGGCCGTCCGCCGC
____________________________________________________________
consensus CAAGTCTGATATCTGAACCTTAAACTCGGATCCGCCCTGGTTATGGTGGCCGTCCGCCGC
. : . : . : . : . : . :
rJMFF014C13- TCCCACCAATGGGGAGGGGTTCAGGCTCGCCGCCGTAGCAGAGGAGGAGTCAGAGCTTTC
rJMSF033H24- TCCCACCAATGGGGAGGGGTTCAGGCTCGCCGCCGTAGCAGAGGAGGAGTCAGAGCTTTC
rJMFF008O14- TCCCACCAATGGGGAGGGGTTCAGGCTCGCCGCCGTAGCAGAGGAGGAGTCAGAGCTTTC
JMFF008O14+ CGCCGTAGCAGAGGAGGAGTCAGAGCTTTC
JMSF033H24+ TCCCACCAATGGGGAGGGGTTCAGGCTCGCCGCCGTAGCAGAGGAGGAGTCAGAGCTTTC
____________________________________________________________
consensus TCCCACCAATGGGGAGGGGTTCAGGCTCGCCGCCGTAGCAGAGGAGGAGTCAGAGCTTTC
. : . : . : . : . : . :
rJMFF014C13- CTGAGGGCTGTGAGCCCTGACCGCCACAC-TGCCGCAGCTTGGCTTGGTCGCCGGCGACG
rJMSF033H24- CTGAGGGCTGTGAGCCCTGACCGCCACAC-TGCCGCAGCTTGGCTTGGTCGCCGGCGACG
rJMFF008O14- CTGAGGGCTGTGAGCCCTGACCGCCACAC-TGCCGCAGCTTGGCTTGGTCGCCGGCGACG
JMFF008O14+ CTGAGGGCTGTGAGCCCTGACCGCCACACTTGCCGCAGCTTGGCTTGGTCGCCGGCGACG
JMFF014C13+ CCGCAGCTTGGCTTGGTCGCCGGCGACG
JMSF033H24+ CTGAGGGCTGTGAGCCCTGACCGCCACAC-TGCCGCAGCTTGGCTTGGTCGCCGGCGACG
____________________________________________________________
consensus CTGAGGGCTGTGAGCCCTGACCGCCACAC-TGCCGCAGCTTGGCTTGGTCGCCGGCGACG
. : . : . : . : . : . :
rJMFF014C13- GCGCCGGAGATGGGAAGTTGAGCTTGGCCTTCTTGCCACGGATGCGCGTGGCTGCCACGT
rJMSF033H24- GCGCCGGAGATGGGAAGTTGAGCTTGGCCTTCTTGCCACGGATGCGCGTGGCTGCCACGT
rJMFF008O14- GCGCCGGAGATGGGAAGTTGAGCTTGGCCTTCTTGCCACGGATGCGCGTGGCTGCCACGT
JMFF008O14+ GCGCCGGAGATGGGAAGTTGAGCTTGGCCTTCTTGCCACGGATGCGCGTGGCTGCCACGT
JMFF014C13+ GCGCCGGAGATGGGAAGTTGAGCTTGGCCTTCTTGCCACGGATGCGCGTGGCTGCCACGT
JMSF033H24+ GCGCCGGAGATGGGAAGTTGAGCTTGGCCTTCTTGCCACGGATGCGCGTGGCTGCCACGT
____________________________________________________________
consensus GCGCCGGAGATGGGAAGTTGAGCTTGGCCTTCTTGCCACGGATGCGCGTGGCTGCCACGT
. : . : . : . : . : . :
rJMFF014C13- CATATGCCCTGGCCGCTTCCTCCGCGGTGTTGAACGTCCCCAGCCAGACTCTAACCC
rJMSF033H24- CATATGCCCTGGCCGCTTCCTCCGCGGTGTTGAACGTCCCCAGCCAGACTCTAACCCCTT
rJMFF008O14- CATATGCCCTGGCCGCTTCCTCCGCGGTGTTGAACGTCCCCAGCCANACTCTAACCCCTT
JMFF008O14+ CATATGCCCTGGCCGCTTCCTCCGCGGTGTTGAACGTCCCCAGCCAGACTCTAACCCCTT
JMFF009O14+ ACCCCTT
JMFF014C13+ CATATGCCCTGGCCGCTTCCTCCGCGGTGTTGAACGTCCCCAGCCAGACTCTAACCCCTT
JMSF033H24+ CATATGCCCTGGCCGCTTCCTCCGCGGTGTTGAACGTCCCCAGCCAGACTCTAACCCCTT
____________________________________________________________
consensus CATATGCCCTGGCCGCTTCCTCCGCGGTGTTGAACGTCCCCAGCCAGACTCTAACCCCTT
. : . : . : . : . : . :
rJMSF033H24- TCTGAGTGTCGCGAATCTCCGCCGCCCATT
rJMFF008O14- TCTGAGGGTCNCGAATCTCCGCCGCCCATT
JMFF008O14+ TCTGAGGGTCGCGAATCTCCGCCGCCCATTTCCCCCACGGCCTCTGCCGGATTCCTCTGT
JMFF009O14+ TCTGAGGGTCGCGAATCTCCGCCGCCCATTTCCCCCACGGCCTCTGCCGGATTCCTCTGT
JMFF014C13+ TCTGAGGGTCGCGAATCTCCGCCGCCCATTTCCCCCACGGCCTCTGCCGGATTCCTCTGT
JMSF033H24+ TCTGAGTGTCGCGAATCTCCGCCGCCCATTTCCCCCACGGCCTCTGCCGGATTCCTCTGT
____________________________________________________________
consensus TCTGAGGGTCGCGAATCTCCGCCGCCCATTTCCCCCACGGCCTCTGCCGGATTCCTCTGT
. : . : . : . : . : . :
JMFF008O14+ ACACGTTCTTCCTCGCCCTCTTCTTCTCACTTTTCTCCGCATTTTCAGCTCCTCCATCTT
JMFF009O14+ ACACGTTNTTCCTCGCCCTCTTCTTCTCACTTTTCTCCGCATTTTCAGCTCCTCCATCTT
JMFF014C13+ ACACGTTCTTCCTCGCCCTCTTCTTCTCACTTTTCTCCGCATTTTCAGCTCCTCCATCTT
JMSF033H24+ ACACGTTCTTCCTCGCCCTCTTCTTCTCACTTTTCTCCGCATTTTCAGCTCCTCCATCTT
____________________________________________________________
consensus ACACGTTCTTCCTCGCCCTCTTCTTCTCACTTTTCTCCGCATTTTCAGCTCCTCCATCTT
. : . : . : . : . : . :
JMFF008O14+ GATTTAGGCGGTTGGTAACAACAGGGAGAGTGGACGGGGAGCTTTGTTTGAGGCCATTAA
JMFF009O14+ GATTTAGGCGGTTGGTAACAACAGGGAGAGTGGACGGGGAGCTTTGTTTGAGGCCATTAA
JMFF014C13+ GATTTAGGCGGTTGGTAACAACAGGGAGAGTGGACGGGGAGCTTTGTTTGAGGCCATTAA
JMSF033H24+ GATTTAGGCGGTTGGTAACAACAGGGAGAGTGGACGGGGAGCTTTGTTTGAGGCCATTAA
____________________________________________________________
consensus GATTTAGGCGGTTGGTAACAACAGGGAGAGTGGACGGGGAGCTTTGTTTGAGGCCATTAA
. : . : . : . : . : . :
JMFF008O14+ TGGCGGATGAGGAGTTGAAGGACCAGAGCTCAGAGATGGGGTCGAGCTCGGCCCAGAGGT
JMFF009O14+ TGGCGGATGAGGAGTTGAAGGACCAGAGCTCAGAGATGGGGTCGAGCTCGGCCCAGAGGT
JMFF014C13+ TGGCGGATGAGGAGTTGAAGGACCAGAGCTCAGAGATGGGGTCGAGCTCGGCCCAGAGGT
JMSF033H24+ TGGCGGATGAGGAGTTGAAGGACCAGAGCTCAGAGATGGGGTCGAGCTCGGCCCAGAGGT
____________________________________________________________
consensus TGGCGGATGAGGAGTTGAAGGACCAGAGCTCAGAGATGGGGTCGAGCTCGGCCCAGAGGT
. : . : . : . : . : . :
JMFF008O14+ CATGGGTGGAGATTTTGCGGCGGCGGCGCTCGGAGATTGGGTCGTAATCGGAGATGATTG
JMFF009O14+ CATGGGTGGAGATTTTGCGGCGGCGGCGCTCGGAGATTGGGTCGTAATCGGAGATGATTG
JMFF014C13+ CATGGGTGGAGATTTTGCGGCGGCGGCGCTCGGAGATTGGGTCGTAATCGGAGATGATTG
JMSF033H24+ CATGGGTGGAGATTTTGCGGCGGCGGCGCTCGGAGATTGGGTCGTAATCGGAGATGATTG
____________________________________________________________
consensus CATGGGTGGAGATTTTGCGGCGGCGGCGCTCGGAGATTGGGTCGTAATCGGAGATGATTG
. : . : . : . : . : . :
JMFF008O14+ CACCGCCACACATCTTTTGCTCTGTGTTTTCCGGTGAAGATTTCTAGAGACTCAACGTT
JMFF009O14+ CACCGCCACACATCTTTTGCTCTGTGTTTTCCGGTGAAGATTTNTAGAGACTCANCGTT
JMFF014C13+ CACCGCCACACATCTTTTGCTCTGTGTTTTCCGGTGAAGATTTCTAGAGACTCAACGTT
JMSF033H24+ CACCGCCACACATCTTTTGCTCTGTGTTTTCCGGTGAAGATTTCTAGAGACTCAACGTTC
____________________________________________________________
consensus CACCGCCACACATCTTTTGCTCTGTGTTTTCCGGTGAAGATTTCTAGAGACTCAACGTTC