Contig 000841:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021I05Sequence453000841 (3)474008267 (3)gb|KJB32900.1|4e-09hypothetical protein B456_005G267200 [Gossypium raimondii] gb|KJB32901.1| hypoth
JMFF034G07Sequence540000841 (3)ref|XP_011085221.1|2e-17PREDICTED: protein kinase PINOID-like [Sesamum indicum]671008267 (3)ref|XP_009759284.1|2e-37PREDICTED: protein kinase PINOID [Nicotiana sylvestris]
JMSF033E22Sequence540000841 (3)ref|XP_011085221.1|2e-17PREDICTED: protein kinase PINOID-like [Sesamum indicum]716008267 (3)gb|KDO75345.1|2e-83hypothetical protein CISIN_1g013016mg [Citrus sinensis]

Alignment

This contig is upended


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JMFF034G07+           TCTCCGCCGCCGCGGAGCCGGCAGAGGTACACCTTCCCGATGTCCCCGCTGCCGATCTGC
JMSF033E22+           TCTCCGCCGCCGCGGAGCCGGCAGAGGTACACCTTCCCGATGTCCCCGCTGCCGATCTGC
                      ____________________________________________________________
consensus             TCTCCGCCGCCGCGGAGCCGGCAGAGGTACACCTTCCCGATGTCCCCGCTGCCGATCTGC
 
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JMFF034G07+           CGGAGAAGGCTGAAGTCTCTGAAGCTCGGCCCGGCCGGCCTCACAGCAGAAGACTCTGCG
JMFF021I05+                                      GGCCCGGCCGGCCTCACAGCAGAAGACTCTGCG
JMSF033E22+           CGGAGAAGGCTGAAGTCTCTGAAGCTCGGCCCGGCCGGCCTCACAGCAGAAGACTCTGCG
                      ____________________________________________________________
consensus             CGGAGAAGGCTGAAGTCTCTGAAGCTCGGCCCGGCCGGCCTCACAGCAGAAGACTCTGCG
 
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JMFF034G07+           GCGGTAGAGCCGCTGATGGTTTGAAACGAAGAATCCGAAGAGCGGCGGCGCGGCATGAGC
JMFF021I05+           GCGGTAGAGCCGCTGATGGTTTGAAACGAAGAATCCGAAGAGCGGCGGCGCGGCATGAGC
JMSF033E22+           GCGGTAGAGCCGCTGATGGTTTGAAACGAAGAATCCGAAGAGCGGCGGCGCGGCATGAGC
                      ____________________________________________________________
consensus             GCGGTAGAGCCGCTGATGGTTTGAAACGAAGAATCCGAAGAGCGGCGGCGCGGCATGAGC
 
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JMFF034G07+           GTGGCCGGATTATGCTCCTCCGGCGAGTTGGTGAGGATCTCAAAGGAGAGACGACTGAAG
JMFF021I05+           GTGGCCGGATTATGCTCCTCCGGCGAGTTGGTGAGGATCTCAAAGGAGAGACGACTGAAG
JMSF033E22+           GTGGCCGGATTATGCTCCTCCGGCGAGTTGGTGAGGATCTCAAAGGAGAGACGACTGAAG
                      ____________________________________________________________
consensus             GTGGCCGGATTATGCTCCTCCGGCGAGTTGGTGAGGATCTCAAAGGAGAGACGACTGAAG
 
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JMFF034G07+           CTGGTGCAGTGGCTCTGATCGCTACCACTGCTCATTGAGCTTTTGCCGGAGTTCACGCCT
JMFF021I05+           CTGGTGCAGTGGCTCTGATCGCTACCACTGCTCATTGAGCTTTTGCCGGAGTTCACGCCT
JMSF033E22+           CTGGTGCAGTGGCTCTGATCGCTACCACTGCTCATTGAGCTTTTGCCGGAGTTCACGCCT
                      ____________________________________________________________
consensus             CTGGTGCAGTGGCTCTGATCGCTACCACTGCTCATTGAGCTTTTGCCGGAGTTCACGCCT
 
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JMFF034G07+           TCGGAAATGCTGAGGTCGTCGGGAAAACAACTGATTAAATCTAACATTATTCTTAAGGAA
JMFF021I05+           TCGGAAATGCTGAGGTCGTCGGGAAAACAACTGATTAAATCTAACATTATTCTTAAGGAA
JMSF033E22+           TCGGAAATGCTGAGGTCGTCGGGAAAACAACTGATTAAATCTAACATTATTCTTAAGGAA
                      ____________________________________________________________
consensus             TCGGAAATGCTGAGGTCGTCGGGAAAACAACTGATTAAATCTAACATTATTCTTAAGGAA
 
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JMFF034G07+           AGATGACAAAACACATAACAACCGGCGGCCGCCGGCGAATCAATGAATTGGAATACAGAG
JMFF021I05+           AGATGACAAAACACATAACAACCGGCGGCCGCCGGCGAATCAATGAATTGGAATACAGAG
JMSF033E22+           AGATGACAAAACACATAACAACCGGCGGCCGCCGGCGAATCAATGAATTGGAATACAGAG
                      ____________________________________________________________
consensus             AGATGACAAAACACATAACAACCGGCGGCCGCCGGCGAATCAATGAATTGGAATACAGAG
 
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JMFF034G07+           ATTTGGAGTGTCAATTGAAATCAGTGATTGGCGTGTTCAGGAAAGGAGAAACAATAATAT
JMFF021I05+           ATTTGGAGTGTCAATTGAAATCAGTGATTGGCGTGTTCAGGAAAGGAGAAACAATAATAT
JMSF033E22+           ATTTGGAGTGTCAATTGAAATCAGTGATTGGCGTGTTCAGGAAAGGAGAAACAATAATAT
                      ____________________________________________________________
consensus             ATTTGGAGTGTCAATTGAAATCAGTGATTGGCGTGTTCAGGAAAGGAGAAACAATAATAT
 
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JMFF034G07+           AAAGATTAGAGCGAGAGAGCGTTTCCCCTAGAGGGAGAGAGTTATGGATGTGGAACTTC 
JMFF021I05+           AAAGATTAGAGCGAGAGAGCGTTTCCCCTAGAGGGAGAGAGTTATGGATGTGGAACTTC 
JMSF033E22+           AAAGATTAGAGCGAGAGAGCGTTTCCCCTAGAGGGAGAGAGTTATGGATGTGGAACTTCC
                      ____________________________________________________________
consensus             AAAGATTAGAGCGAGAGAGCGTTTCCCCTAGAGGGAGAGAGTTATGGATGTGGAACTTCC