Contig 000837:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF032N14Sequence625000837 (2)gb|KJB51106.1|9e-85hypothetical protein B456_008G201300 [Gossypium raimondii]729004373 (3)gb|KDO70183.1|5e-04hypothetical protein CISIN_1g0380452mg, partial [Citrus sinensis]
JMSF043J03Sequence714000837 (2)ref|XP_009607879.1|207PREDICTED: uridine-cytidine kinase C isoform X2 [Nicotiana tomentosiformis]762004373 (3)gb|EYU38166.1|3e-06hypothetical protein MIMGU_mgv1a002631mg [Erythranthe guttata]

Alignment

This contig is upended


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JMSF043J03+                                            CAATGAGTACTACTCGAGAACTGGGAA
                      ____________________________________________________________
consensus                                              CAATGAGTACTACTCGAGAACTGGGAA
 
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JMSF043J03+           CATCAACCGTCCTGTATCCACTACGAGAACTAGATTTGAAGTCATATATAGGAACTTGAA
                      ____________________________________________________________
consensus             CATCAACCGTCCTGTATCCACTACGAGAACTAGATTTGAAGTCATATATAGGAACTTGAA
 
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JMSF043J03+           CAGACTTTCCAGCTTTTAAGCCTCGGATATTCTCGAGCAAAGTTTCGTAGTCCGTCAAGC
                      ____________________________________________________________
consensus             CAGACTTTCCAGCTTTTAAGCCTCGGATATTCTCGAGCAAAGTTTCGTAGTCCGTCAAGC
 
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JMSF043J03+           GTGGATCTGTTTAAAAAATTACCACTCGTTAGCGTAAATAACAAGTAATTTTCTCGTGAG
                      ____________________________________________________________
consensus             GTGGATCTGTTTAAAAAATTACCACTCGTTAGCGTAAATAACAAGTAATTTTCTCGTGAG
 
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JMSF043J03+           TGGAATGTTTTGTAAGTAACCATGAAAGTTTCCATCGATAATCCGACTTGGATCGTTGTA
JMSF032N14+                                   AAAGTTTCCATCGATAATCCGACTTGGATCGTTGTA
                      ____________________________________________________________
consensus             TGGAATGTTTTGTAAGTAACCATGAAAGTTTCCATCGATAATCCGACTTGGATCGTTGTA
 
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JMSF043J03+           GTTGTCCATGTTTATGACAGCAATACTAGGCATAAAGTTGAGAATCTTTTCGGTAAACAC
JMSF032N14+           GTTGTCCATGTTTATGACAGCAATACTAGGCATAAAGTTGAGAATCTTTTCGGTAAACAC
                      ____________________________________________________________
consensus             GTTGTCCATGTTTATGACAGCAATACTAGGCATAAAGTTGAGAATCTTTTCGGTAAACAC
 
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JMSF043J03+           AGTCTTTCCAGCACCAGAAGGGCCTGCCACTCCAACCAGCGTGATTCCATCGTTCTTTTG
JMSF032N14+           AGTCTTTCCAGAACCAGAAGGGCCTGCCACTCCAACCAGCGTGATTCCATCGTTCTTTTG
                      ____________________________________________________________
consensus             AGTCTTTCCAGCACCAGAAGGGCCTGCCACTCCAACCAGCGTGATTCCATCGTTCTTTTG
 
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JMSF043J03+           AGCCAACAATTGGCATGCCCGGATCACGATGAAGAATCCTTTTTCAAATGACAGAGTATC
JMSF032N14+           AGCCAACAATTGGCATGCCCGGATCACGATGAAGAATCCTTTTTCAAATGACAGAGTATC
                      ____________________________________________________________
consensus             AGCCAACAATTGGCATGCCCGGATCACGATGAAGAATCCTTTTTCAAATGACAGAGTATC
 
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JMSF043J03+           TTGAATTGGGACAATCTCATAACGACCCGTGTCCCTTCTTTTCACCAGCTGGACTTGATC
JMSF032N14+           TTGAATTGGGACAATCTCATAACGACCCGTGTCCCTTCTTTTCACCAGCTGGACTTGATC
                      ____________________________________________________________
consensus             TTGAATTGGGACAATCTCATAACGACCCGTGTCCCTTCTTTTCACCAGCTGGACTTGATC
 
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JMSF043J03+           TCTCAGTAAGCCAGATCTTTTCCTGGGTGATTCAAGACTCGAAACACTATCCTGAGCCAT
JMSF032N14+           TCTCAGTAAGCCAGATCTTTTCCTGGGTGATTCAAGACTCGAAACACTATCCTGAGCCAT
                      ____________________________________________________________
consensus             TCTCAGTAAGCCAGATCTTTTCCTGGGTGATTCAAGACTCGAAACACTATCCTGAGCCAT
 
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JMSF043J03+           CAATATCTCTAATATTCTTTGTGTTTCAGAGACTGCAGAGAACTGTGTGTGTGGATGATG
JMSF032N14+           CAATATCTCTAATATTCTTTGTGTTTCAGAGACTGCAGAGAACTGTGTGTGTGGATGATG
                      ____________________________________________________________
consensus             CAATATCTCTAATATTCTTTGTGTTTCAGAGACTGCAGAGAACTGTGTGTGTGGATGATG
 
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JMSF043J03+           GATGAAATAATAGCAGAAAGATGGGGTTTTTAGAGCGGTGGAAGGGAAAAGAGGAAGTAA
JMSF032N14+           GATGAAATAATAGCAGAAAGATGGGGTTTTTAGAGCGGTGGAAGGGAAAAGAGGAAGTAA
                      ____________________________________________________________
consensus             GATGAAATAATAGCAGAAAGATGGGGTTTTTAGAGCGGTGGAAGGGAAAAGAGGAAGTAA
 
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JMSF043J03+           CGATTGTTAATCCGATAATGGTTCAC                                  
JMSF032N14+           CGATTGTTAATCCGATAATGGTTCACACATCGGACAAATCGAAGTCGATCAGTAACAGTC
                      ____________________________________________________________
consensus             CGATTGTTAATCCGATAATGGTTCACACATCGGACAAATCGAAGTCGATCAGTAACAGTC