Contig 000836:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS168A05Sequence602000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [
JMSF032I19Sequence668000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [746004335 (4)ref|XP_009767474.1|4e-35PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l
JMSF034M05Sequence430000836 (5)ref|XP_006361409.1|1e-04PREDICTED: probable serine/threonine protein phosphatase 2A regulatory subunit 637004335 (4)gb|EYU19894.1|7e-09hypothetical protein MIMGU_mgv1a004196mg [Erythranthe guttata]
JMSF038I10Sequence667000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [888004335 (4)ref|XP_006606447.1|6e-52PREDICTED: probable serine/threonine protein phosphatase 2A regulatory subunit
JMSF047D06Sequence669000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [798004335 (4)ref|XP_009767474.1|2e-41PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF047D06+ TGCTTCAGG
JMSF038I10+ CTTCAGG
JMSF032I19+ CTTCAGG
                      ____________________________________________________________
consensus TGCTTCAGG
 
. : . : . : . : . : . :
JMSF047D06+ GTTCTAGGTGAACCCGAAGAACTTCGTGGTGAAAGTGGAGGTGCATTGCCAGCAGGAAAG
JMSF038I10+ GTTCTAGGTGAACCCGAAGAACTTCGTGGTGAAAGTGGAGGTGCATTGCCAGCAGGAAAG
JMFS168A05+ GAGGTGCATTGCCAGCAGGAAAG
JMSF032I19+ GTTCTAGGTGAACCCGAAGAACTTCGTGGTGAAAGTGGAGGTGCATTGCCAGCAGGAAAG
                      ____________________________________________________________
consensus GTTCTAGGTGAACCCGAAGAACTTCGTGGTGAAAGTGGAGGTGCATTGCCAGCAGGAAAG
 
. : . : . : . : . : . :
JMSF047D06+ ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
JMSF038I10+ ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
JMFS168A05+ ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
JMSF032I19+ ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
                      ____________________________________________________________
consensus ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
 
. : . : . : . : . : . :
JMSF047D06+ AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
JMSF038I10+ AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
JMFS168A05+ AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
JMSF032I19+ AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
                      ____________________________________________________________
consensus AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
 
. : . : . : . : . : . :
JMSF047D06+ GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
JMSF038I10+ GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
JMFS168A05+ GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
JMSF034M05+ GATGGCCAAC
JMSF032I19+ GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
                      ____________________________________________________________
consensus GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
 
. : . : . : . : . : . :
JMSF047D06+ GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
JMSF038I10+ GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
JMFS168A05+ GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
JMSF034M05+ GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
JMSF032I19+ GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
                      ____________________________________________________________
consensus GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
 
. : . : . : . : . : . :
JMSF047D06+ TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
JMSF038I10+ TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
JMFS168A05+ TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
JMSF034M05+ TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
JMSF032I19+ TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
                      ____________________________________________________________
consensus TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
 
. : . : . : . : . : . :
JMSF047D06+ GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
JMSF038I10+ GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
JMFS168A05+ GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
JMSF034M05+ GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCNCGCCATAGCAACTTA
JMSF032I19+ GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
                      ____________________________________________________________
consensus GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
 
. : . : . : . : . : . :
JMSF047D06+ AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
JMSF038I10+ AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
JMFS168A05+ AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
JMSF034M05+ AAATACAAACAACAACGCGCAGNTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
JMSF032I19+ AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
                      ____________________________________________________________
consensus AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
 
. : . : . : . : . : . :
JMSF047D06+ ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
JMSF038I10+ ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
JMFS168A05+ ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
JMSF034M05+ ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
JMSF032I19+ ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
                      ____________________________________________________________
consensus ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
 
. : . : . : . : . : . :
JMSF047D06+ TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
JMSF038I10+ TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
JMFS168A05+ TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
JMSF034M05+ TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
JMSF032I19+ TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
                      ____________________________________________________________
consensus TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
 
. : . : . : . : . : . :
JMSF047D06+ GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC
JMSF038I10+ GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC
JMFS168A05+ GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAG
JMSF034M05+ GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC
JMSF032I19+ GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC
                      ____________________________________________________________
consensus GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC