Contig 000836:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS168A05Sequence602000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [
JMSF032I19Sequence668000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [746004335 (4)ref|XP_009767474.1|4e-35PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l
JMSF034M05Sequence430000836 (5)ref|XP_006361409.1|1e-04PREDICTED: probable serine/threonine protein phosphatase 2A regulatory subunit 637004335 (4)gb|EYU19894.1|7e-09hypothetical protein MIMGU_mgv1a004196mg [Erythranthe guttata]
JMSF038I10Sequence667000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [888004335 (4)ref|XP_006606447.1|6e-52PREDICTED: probable serine/threonine protein phosphatase 2A regulatory subunit
JMSF047D06Sequence669000836 (5)ref|XP_004236780.1|2e-20PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta [798004335 (4)ref|XP_009767474.1|2e-41PREDICTED: serine/threonine protein phosphatase 2A regulatory subunit B''beta-l

Alignment

This contig is upended


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JMSF047D06+                                                              TGCTTCAGG
JMSF038I10+                                                                CTTCAGG
JMSF032I19+                                                                CTTCAGG
                      ____________________________________________________________
consensus                                                                TGCTTCAGG
 
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JMSF047D06+           GTTCTAGGTGAACCCGAAGAACTTCGTGGTGAAAGTGGAGGTGCATTGCCAGCAGGAAAG
JMSF038I10+           GTTCTAGGTGAACCCGAAGAACTTCGTGGTGAAAGTGGAGGTGCATTGCCAGCAGGAAAG
JMFS168A05+                                                GAGGTGCATTGCCAGCAGGAAAG
JMSF032I19+           GTTCTAGGTGAACCCGAAGAACTTCGTGGTGAAAGTGGAGGTGCATTGCCAGCAGGAAAG
                      ____________________________________________________________
consensus             GTTCTAGGTGAACCCGAAGAACTTCGTGGTGAAAGTGGAGGTGCATTGCCAGCAGGAAAG
 
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JMSF047D06+           ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
JMSF038I10+           ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
JMFS168A05+           ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
JMSF032I19+           ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
                      ____________________________________________________________
consensus             ATAGAAGGCAAAGAATTGCTTGTGGCAGCACTACTGCTTGAAGAAGTTCCTGAGACACCT
 
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JMSF047D06+           AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
JMSF038I10+           AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
JMFS168A05+           AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
JMSF032I19+           AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
                      ____________________________________________________________
consensus             AAGGGACAAGCACCCTTGGCATTACTGACCAAAGTTTTTACCAAAACAATCGTATCAGGA
 
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JMSF047D06+           GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
JMSF038I10+           GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
JMFS168A05+           GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
JMSF034M05+                                                             GATGGCCAAC
JMSF032I19+           GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
                      ____________________________________________________________
consensus             GTCGAGAGCCATTCATCAAAGAGCTTCTCAACGACATACGCCTTCGTTTTGATGGCCAAC
 
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JMSF047D06+           GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
JMSF038I10+           GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
JMFS168A05+           GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
JMSF034M05+           GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
JMSF032I19+           GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
                      ____________________________________________________________
consensus             GGAGAAAAGTCCGGAAGCTGCAATAGCTCCGTGTCTAGGCTGGCCACATCACCGTTGAAA
 
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JMSF047D06+           TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
JMSF038I10+           TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
JMFS168A05+           TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
JMSF034M05+           TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
JMSF032I19+           TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
                      ____________________________________________________________
consensus             TCCACATCCATCGCGACCTCCACAAATCAGAATCAACTCAAACCAAATCCTCAGATCTTC
 
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JMSF047D06+           GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
JMSF038I10+           GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
JMFS168A05+           GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
JMSF034M05+           GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCNCGCCATAGCAACTTA
JMSF032I19+           GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
                      ____________________________________________________________
consensus             GACCTCTCCCTCTATCATCCAAGCAACGCGAAACACCACCTCTCACGCCATAGCAACTTA
 
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JMSF047D06+           AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
JMSF038I10+           AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
JMFS168A05+           AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
JMSF034M05+           AAATACAAACAACAACGCGCAGNTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
JMSF032I19+           AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
                      ____________________________________________________________
consensus             AAATACAAACAACAACGCGCAGCTCCGGCCAAAGTCCTCGCACGGATCTTTCCGAATTGG
 
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JMSF047D06+           ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
JMSF038I10+           ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
JMFS168A05+           ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
JMSF034M05+           ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
JMSF032I19+           ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
                      ____________________________________________________________
consensus             ATGAATCGGCAGAGGTAGATGCAATCCTATGAGGATTGAAATGAATGATTGAATTTTCAA
 
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JMSF047D06+           TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
JMSF038I10+           TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
JMFS168A05+           TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
JMSF034M05+           TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
JMSF032I19+           TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
                      ____________________________________________________________
consensus             TGTTTTGAGATCGGAGGATGGGAGTTTGCAGAGAAAAGGGAGGCGAAACCCTTGAGAGGC
 
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JMSF047D06+           GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC
JMSF038I10+           GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC
JMFS168A05+           GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAG                     
JMSF034M05+           GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC
JMSF032I19+           GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC
                      ____________________________________________________________
consensus             GAGAGAGGAGCCATGTACAGATTTTTGTGTGAAGAAGAGCAAGGAAGTGCGCGGAGAACC