| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038E10 | Sequence | 625 | 000835 (5) | ref|XP_009591171.1| | 164 | PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis] | 731 | 020226 | ref|NP_001266007.1| | 1e-93 | Hop-interacting protein THI135 [Solanum lycopersicum] gb|AEW69820.1| Hop-interac |
| JMFS117F01 | Sequence | 622 | 000835 (5) | ref|XP_009591171.1| | 165 | PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis] | |||||
| JMSF009O23 | Sequence | 287 | 000835 (5) | ref|XP_009591171.1| | 55.8 | PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis] | 742 | 008571 (3) | ref|XP_009611847.1| | 6e-123 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] |
| JMSF015N24 | Sequence | 246 | 000835 (5) | ref|XP_009591171.1| | 56.2 | PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis] | 751 | 008571 (3) | ref|XP_009611847.1| | 8e-125 | PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis] |
| JMSF032C20 | Sequence | 690 | 000835 (5) | ref|XP_009591171.1| | 254 | PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis] | 700 | 008571 (3) | ref|NP_001266007.1| | 4e-112 | Hop-interacting protein THI135 [Solanum lycopersicum] gb|AEW69820.1| Hop-interac |
This contig is upended
. : . : . : . : . : . :
JMFS117F01+ GATATGAGTTTCAAGCCTCAGTGGAGGCG
____________________________________________________________
consensus GATATGAGTTTCAAGCCTCAGTGGAGGCG
. : . : . : . : . : . :
JMFS117F01+ TTATTGGTTCATTGTGTTTCAGTAGGTTGAGAAAGTATATGAACAGATACTACAATGTAA
____________________________________________________________
consensus TTATTGGTTCATTGTGTTTCAGTAGGTTGAGAAAGTATATGAACAGATACTACAATGTAA
. : . : . : . : . : . :
JMFS117F01+ TAGAGCCAGTAACTTTCAAAAAAAAATAAATTCAACAGTACCTTTGGGCTTCATCTTTCA
____________________________________________________________
consensus TAGAGCCAGTAACTTTCAAAAAAAAATAAATTCAACAGTACCTTTGGGCTTCATCTTTCA
. : . : . : . : . : . :
JMFS117F01+ ATGAAGAACTGACATCAACCAAATCTGCTGAGGCTCCATTGTAGTTAGGGTGAACCTACG
____________________________________________________________
consensus ATGAAGAACTGACATCAACCAAATCTGCTGAGGCTCCATTGTAGTTAGGGTGAACCTACG
. : . : . : . : . : . :
JMFS117F01+ CTAGGAGATGTTATAGTAAGACAGCAGTTCCATATGTGAGTGTGTGCATCACTTCCAAAC
JMFF038E10+ AAC
JMSF032C20+ AAC
____________________________________________________________
consensus CTAGGAGATGTTATAGTAAGACAGCAGTTCCATATGTGAGTGTGTGCATCACTTCCAAAC
. : . : . : . : . : . :
JMFS117F01+ CTGTACAGGGCGAACTTCAAATGCAGGTCTATTCTCAGGATCCTCAGCTGAACTGAGCAA
JMFF038E10+ CTGTACAGGGCGAACTTCAAATGCAGGTCTATTCTCAGGATCCTCAGCTGAACTGAGCAA
JMSF032C20+ CTGTACAGGGCGAACTTCAAATGCAGGTCTATTCTCAGGATCCTCAGCTGAACTGAGCAA
____________________________________________________________
consensus CTGTACAGGGCGAACTTCAAATGCAGGTCTATTCTCAGGATCCTCAGCTGAACTGAGCAA
. : . : . : . : . : . :
JMFS117F01+ TCTCTTGTGCATTAGCACATCCTCAGCTCTTTCCACGTTCACATCCGATGCATATCTTGC
JMFF038E10+ TCTCTTGTGCATTAGCACATCCTCAGCTCTTTCCACGTTCACATCCGATGCATATCTTGC
JMSF032C20+ TCTCTTGTGCATTAGCACATCCTCAGCTCTTTCCACGTTCACATCCGATGCATATCTTGC
____________________________________________________________
consensus TCTCTTGTGCATTAGCACATCCTCAGCTCTTTCCACGTTCACATCCGATGCATATCTTGC
. : . : . : . : . : . :
JMFS117F01+ GGGGAGGCGACTGAAATGAAGCCAGAGCTGGTCCTCGAAGCCGGGGAATTTGACATCGTC
JMFF038E10+ GGGGAGGCGACTGAAATGAAGCCAGAGCTGGTCCTCGAAGCCGGGGAATTTGACATCGTC
JMSF032C20+ GGGGAGGCGACTGAAATGAAGCCAGAGCTGGTCCTCGAAGCCGGGGAATTTGACATCGTC
____________________________________________________________
consensus GGGGAGGCGACTGAAATGAAGCCAGAGCTGGTCCTCGAAGCCGGGGAATTTGACATCGTC
. : . : . : . : . : . :
JMFS117F01+ GAGATTCAATTCCCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
JMFF038E10+ GAGATTCAATTCCCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
JMSF009O23+ CGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
JMSF015N24+ CCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
JMSF032C20+ GAGATTCAATTCCCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
____________________________________________________________
consensus GAGATTCAATTCCCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
. : . : . : . : . : . :
JMFS117F01+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
JMFF038E10+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
JMSF009O23+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
JMSF015N24+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
JMSF032C20+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
____________________________________________________________
consensus CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
. : . : . : . : . : . :
JMFS117F01+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGA
JMFF038E10+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
JMSF009O23+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
JMSF015N24+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
JMSF032C20+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
____________________________________________________________
consensus ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
. : . : . : . : . : . :
JMFF038E10+ TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
JMSF009O23+ TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
JMSF015N24+ TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
JMSF032C20+ TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
____________________________________________________________
consensus TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
. : . : . : . : . : . :
JMFF038E10+ ATCGGATTT
JMSF009O23+ ATCGGATTTAGTATCATAAGAAAGGGGAAATGATTTGATTTGATGGCTAAGTAGGAG
JMSF015N24+ ATCGGATTTAGTATCA
JMSF032C20+ ATCGGATTTAGTATCATAAGAAAGGGGAAATGATTTGATTTGATGGCTAAGTAGGAGACC
____________________________________________________________
consensus ATCGGATTTAGTATCATAAGAAAGGGGAAATGATTTGATTTGATGGCTAAGTAGGAGACC