Contig 000835:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038E10Sequence625000835 (5)ref|XP_009591171.1|164PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis]731020226ref|NP_001266007.1|1e-93Hop-interacting protein THI135 [Solanum lycopersicum] gb|AEW69820.1| Hop-interac
JMFS117F01Sequence622000835 (5)ref|XP_009591171.1|165PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis]
JMSF009O23Sequence287000835 (5)ref|XP_009591171.1|55.8PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis]742008571 (3)ref|XP_009611847.1|6e-123PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF015N24Sequence246000835 (5)ref|XP_009591171.1|56.2PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis]751008571 (3)ref|XP_009611847.1|8e-125PREDICTED: serine/threonine-protein kinase HT1 [Nicotiana tomentosiformis]
JMSF032C20Sequence690000835 (5)ref|XP_009591171.1|254PREDICTED: uncharacterized protein LOC104088233 [Nicotiana tomentosiformis]700008571 (3)ref|NP_001266007.1|4e-112Hop-interacting protein THI135 [Solanum lycopersicum] gb|AEW69820.1| Hop-interac

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS117F01+ GATATGAGTTTCAAGCCTCAGTGGAGGCG
                      ____________________________________________________________
consensus GATATGAGTTTCAAGCCTCAGTGGAGGCG
 
. : . : . : . : . : . :
JMFS117F01+ TTATTGGTTCATTGTGTTTCAGTAGGTTGAGAAAGTATATGAACAGATACTACAATGTAA
                      ____________________________________________________________
consensus TTATTGGTTCATTGTGTTTCAGTAGGTTGAGAAAGTATATGAACAGATACTACAATGTAA
 
. : . : . : . : . : . :
JMFS117F01+ TAGAGCCAGTAACTTTCAAAAAAAAATAAATTCAACAGTACCTTTGGGCTTCATCTTTCA
                      ____________________________________________________________
consensus TAGAGCCAGTAACTTTCAAAAAAAAATAAATTCAACAGTACCTTTGGGCTTCATCTTTCA
 
. : . : . : . : . : . :
JMFS117F01+ ATGAAGAACTGACATCAACCAAATCTGCTGAGGCTCCATTGTAGTTAGGGTGAACCTACG
                      ____________________________________________________________
consensus ATGAAGAACTGACATCAACCAAATCTGCTGAGGCTCCATTGTAGTTAGGGTGAACCTACG
 
. : . : . : . : . : . :
JMFS117F01+ CTAGGAGATGTTATAGTAAGACAGCAGTTCCATATGTGAGTGTGTGCATCACTTCCAAAC
JMFF038E10+ AAC
JMSF032C20+ AAC
                      ____________________________________________________________
consensus CTAGGAGATGTTATAGTAAGACAGCAGTTCCATATGTGAGTGTGTGCATCACTTCCAAAC
 
. : . : . : . : . : . :
JMFS117F01+ CTGTACAGGGCGAACTTCAAATGCAGGTCTATTCTCAGGATCCTCAGCTGAACTGAGCAA
JMFF038E10+ CTGTACAGGGCGAACTTCAAATGCAGGTCTATTCTCAGGATCCTCAGCTGAACTGAGCAA
JMSF032C20+ CTGTACAGGGCGAACTTCAAATGCAGGTCTATTCTCAGGATCCTCAGCTGAACTGAGCAA
                      ____________________________________________________________
consensus CTGTACAGGGCGAACTTCAAATGCAGGTCTATTCTCAGGATCCTCAGCTGAACTGAGCAA
 
. : . : . : . : . : . :
JMFS117F01+ TCTCTTGTGCATTAGCACATCCTCAGCTCTTTCCACGTTCACATCCGATGCATATCTTGC
JMFF038E10+ TCTCTTGTGCATTAGCACATCCTCAGCTCTTTCCACGTTCACATCCGATGCATATCTTGC
JMSF032C20+ TCTCTTGTGCATTAGCACATCCTCAGCTCTTTCCACGTTCACATCCGATGCATATCTTGC
                      ____________________________________________________________
consensus TCTCTTGTGCATTAGCACATCCTCAGCTCTTTCCACGTTCACATCCGATGCATATCTTGC
 
. : . : . : . : . : . :
JMFS117F01+ GGGGAGGCGACTGAAATGAAGCCAGAGCTGGTCCTCGAAGCCGGGGAATTTGACATCGTC
JMFF038E10+ GGGGAGGCGACTGAAATGAAGCCAGAGCTGGTCCTCGAAGCCGGGGAATTTGACATCGTC
JMSF032C20+ GGGGAGGCGACTGAAATGAAGCCAGAGCTGGTCCTCGAAGCCGGGGAATTTGACATCGTC
                      ____________________________________________________________
consensus GGGGAGGCGACTGAAATGAAGCCAGAGCTGGTCCTCGAAGCCGGGGAATTTGACATCGTC
 
. : . : . : . : . : . :
JMFS117F01+ GAGATTCAATTCCCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
JMFF038E10+ GAGATTCAATTCCCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
JMSF009O23+ CGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
JMSF015N24+ CCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
JMSF032C20+ GAGATTCAATTCCCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
                      ____________________________________________________________
consensus GAGATTCAATTCCCGGAGCCGGCTAAGCACTTGCGTGAAGACTTCGTAGCGCTGCCAGTG
 
. : . : . : . : . : . :
JMFS117F01+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
JMFF038E10+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
JMSF009O23+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
JMSF015N24+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
JMSF032C20+ CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
                      ____________________________________________________________
consensus CAGGCGGCTCTGCTTCGCAGACGACGGTTCCACCACCGCACGGCTCTCGCAGCTGTCCTT
 
. : . : . : . : . : . :
JMFS117F01+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGA
JMFF038E10+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
JMSF009O23+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
JMSF015N24+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
JMSF032C20+ ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
                      ____________________________________________________________
consensus ATCATCCATTCCCATTCCGGAAGCTTCTGAAGCAAGGAGAGGAGAGGAGATGAGAGAAAT
 
. : . : . : . : . : . :
JMFF038E10+ TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
JMSF009O23+ TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
JMSF015N24+ TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
JMSF032C20+ TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
                      ____________________________________________________________
consensus TCAAGGACGAGTGAAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGAATTTCTGTTCATCAT
 
. : . : . : . : . : . :
JMFF038E10+ ATCGGATTT
JMSF009O23+ ATCGGATTTAGTATCATAAGAAAGGGGAAATGATTTGATTTGATGGCTAAGTAGGAG
JMSF015N24+ ATCGGATTTAGTATCA
JMSF032C20+ ATCGGATTTAGTATCATAAGAAAGGGGAAATGATTTGATTTGATGGCTAAGTAGGAGACC
                      ____________________________________________________________
consensus ATCGGATTTAGTATCATAAGAAAGGGGAAATGATTTGATTTGATGGCTAAGTAGGAGACC