Contig 000831:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN011D22Sequence491000831 (16)gb|EMT31824.1|4e-49Histone H4 [Aegilops tauschii]
JMFN011E02Sequence497000831 (16)ref|XP_007133245.1|7e-50hypothetical protein PHAVU_011G164000g [Phaseolus vulgaris] gb|ESW05239.1| hypot
JMFN029M22Sequence504000831 (16)gb|AFW80115.1|4e-49hypothetical protein ZEAMMB73_313798 [Zea mays]
JMFN039D15Sequence492000831 (16)gb|AFW80115.1|4e-49hypothetical protein ZEAMMB73_313798 [Zea mays]
JMFS013A04Sequence495000831 (16)gb|EMT31824.1|5e-49Histone H4 [Aegilops tauschii]
JMFS078H12Sequence497000831 (16)gb|EMT31824.1|5e-49Histone H4 [Aegilops tauschii]
JMSF013B17Sequence238000831 (16)ref|XP_002075990.1|3e-15GK12392 [Drosophila willistoni] gb|EDW86976.1| GK12392 [Drosophila willistoni]481000831 (16)gb|AFW80115.1|1e-49hypothetical protein ZEAMMB73_313798 [Zea mays]
JMSF015B17Sequence214000831 (16)ref|XP_011069522.1|5e-12PREDICTED: histone H4-like, partial [Sesamum indicum]
JMSF017B17Sequence210000831 (16)
JMSF031P08Sequence535000831 (16)gb|AFW80115.1|2e-49hypothetical protein ZEAMMB73_313798 [Zea mays]482000831 (16)gb|AFW80115.1|1e-49hypothetical protein ZEAMMB73_313798 [Zea mays]
JMSF044L03Sequence540000831 (16)gb|AFW80115.1|2e-49hypothetical protein ZEAMMB73_313798 [Zea mays]491000831 (16)gb|AFW80115.1|1e-49hypothetical protein ZEAMMB73_313798 [Zea mays]
JMSF049I03Sequence535000831 (16)gb|AFW80115.1|5e-49hypothetical protein ZEAMMB73_313798 [Zea mays]171000831 (16)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN039D15+ CAAAAGAACAGAAAGTCATTGGATTTAAATCAGATTAACATTGTAACAGTC
JMFS013A04+ CAAAAGAACAGAAAGTCATTGGATTTAAATCAGATTAACATTGTAACAGTC
JMFS078H12+ CAAAAGAACTGAAAATCATTGGACTTAAATCAGATTAACATTGTAACAATC
JMSF049I03+ GAACTGAAAATCATTGGACTTAAATCAGATTAACATTGTAACAATC
JMFN011D22+ GAACTGAAAATCATTGGACTTAAATCAGATTAACATTGTAACAATC
rJMSF044L03- ATTGTAACAATC
rJMSF031P08- ATC
rJMSF013B17- TC
rJMSF015B17- C
JMFN011E02+ GAACTGAAAATCATTGGACTTAAATCAGATTAACATTGTAACAATC
JMFN029M22+ GAAAGTCATTGGATTTAAATCAGATTAACATTGTAACAGTC
JMSF031P08+ GAACTGAAAATCATTGGACTTAAATCAGATTAACATTGTAACAATC
                      ____________________________________________________________
consensus CAAAAGAACTGAAAATCATTGGACTTAAATCAGATTAACATTGTAACAATC
 
. : . : . : . : . : . :
JMFN039D15+ ATCAATCGCAGATTGATTCAGAATAGAACGCCCAATTCAACCCTAATCATCAATCCTAGA
JMFS013A04+ ATCAATCGCAGATTGATTCAGAATAGAACGCCCAATTCAACCCTAATCATCAATCCTAGA
JMFS078H12+ ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
JMSF049I03+ ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
JMFN011D22+ ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
rJMSF044L03- ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
rJMSF031P08- ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
rJMSF013B17- ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
JMSF044L03+ ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
rJMSF015B17- ATCAATCGGAGATTGATTCAGAACNGAACGCCCAATTTAANCTTAATANTCGACCCTAGA
JMFN011E02+ ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
JMFN029M22+ ATCAATCGCAGATTGATTCAGAATAGAACGCCCAATTCAACCCTAATCATCAATCCTAGA
JMSF031P08+ ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
                      ____________________________________________________________
consensus ATCAATCGGAGATTGATTCAGAACAGAACGCCCAATTTAACCTTAATAATCAACCCTAGA
 
. : . : . : . : . : . :
JMFN039D15+ CCTAATTAACACC-AAAATATACACCGCTGAAACTAAAATCTAACCGCCGAATCCGTACA
JMFS013A04+ CCTAATTAACACC-AAAATATACACCGCTGAAACTAAAATCTAACCGCCGAATCCGTACA
JMFS078H12+ CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
JMSF049I03+ CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
JMFN011D22+ CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
rJMSF044L03- CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
rJMSF031P08- CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
rJMSF013B17- CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
JMSF044L03+ CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
rJMSF015B17- CCTAAACACCACCAAAAATATACACCGCCGATATAAAANCCTAACCACCGAATCCGNACA
JMFN011E02+ CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
JMFN029M22+ CCTAATTAACACC-AAAATATACACCGCTGAAACTAAAATCTAACCGCCGAATCCGTACA
JMSF031P08+ CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
                      ____________________________________________________________
consensus CCTAAACACCACCAAAAATATACACCGCCGATATAAAAACCTAACCACCGAATCCGTACA
 
. : . : . : . : . : . :
JMFN039D15+ GAGTACGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATTGCGGTGACCGTCTTCCGGC
JMFS013A04+ GAGTACGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATTGCGGTGACCGTCTTCCGGC
JMFS078H12+ GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
JMSF049I03+ GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
JMFN011D22+ GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
rJMSF044L03- GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
rJMSF031P08- GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
rJMSF013B17- GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
JMSF044L03+ GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
rJMSF015B17- GAGTGCGGCCCTGTCTCTTGAGAGCNTAGACGACGTCCATCGCNGTGACCGTCTTNCGGC
JMFN011E02+ GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
JMFN029M22+ GAGTACGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATTGCGGTGACCGTCTTCCGGC
JMSF031P08+ GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
                      ____________________________________________________________
consensus GAGTGCGGCCCTGTCTCTTGAGAGCATAGACGACGTCCATCGCAGTGACCGTCTTCCGGC
 
. : . : . : . : . : . :
JMFN039D15+ GAGCGTGCTCGGTGTAGGTAACAGCGTCGCGGATGACATTCTCGAGGAAGATCTTGAGGA
JMFS013A04+ GAGCGTGCTCGGTGTAGGTAACAGCGTCGCGGATGACATTCTCGAGGAAGATCTTGAGGA
JMFS078H12+ GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
JMSF049I03+ GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
JMFN011D22+ GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
rJMSF044L03- GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
rJMSF031P08- GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
rJMSF013B17- GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
JMSF044L03+ GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
rJMSF015B17- GAGCGTGCTCAGTGNANGTAACAGCGTCG
JMFN011E02+ GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
JMFN029M22+ GAGCGTGCTCGGTGTAGGTAACAGCGTCGCGGATGACATTCTCGAGGAAGATCTTGAGGA
JMSF031P08+ GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
                      ____________________________________________________________
consensus GAGCGTGCTCAGTGTAGGTAACAGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGGA
 
. : . : . : . : . : . :
JMFN039D15+ CACCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCCA
JMFS013A04+ CACCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCCA
JMFS078H12+ CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
JMSF049I03+ CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
JMFN011D22+ CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
rJMSF044L03- CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
rJMSF031P08- CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
rJMSF013B17- CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
JMSF044L03+ CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
JMFN011E02+ CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
JMFN029M22+ CACCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCCA
JMSF013B17+ GCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
rJMSF017B17- AGATACGCTTCNCTCCACCACGGCNAGCAA
JMSF031P08+ CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
                      ____________________________________________________________
consensus CGCCGCGAGTCTCCTCGTAGATGAGGCCGGAGATACGCTTCACTCCACCACGGCGAGCAA
 
. : . : . : . : . : . :
JMFN039D15+ GACGGCGAATGGCCGGCTTCGTGATGCCTTG-GATGTTGTCCCGGAGGACCTTACGGTGT
JMFS013A04+ GACGGCGAATGGCCGGCTTCGTGATGCCTTG-GATGTTGTCCCGGAGGACCTTACGGTGT
JMFS078H12+ GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
JMSF049I03+ GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
JMFN011D22+ GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
rJMSF044L03- GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
rJMSF031P08- GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
rJMSF013B17- GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
JMSF044L03+ GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
JMFN011E02+ GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
JMFN029M22+ GACGGCGAATGGCCGGCTTCGTGATGCCTTG-GATGTTGTCCCGGAGGACCTTACGGTGT
JMSF013B17+ GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
rJMSF049I03- ATGGCCGGCTTCGTGANGCCCTG-GATGTTGTCCCGGAGGACCTTACGGNGT
rJMSF017B17- GACGGNNAATGGTCGGCTTCGTGATGCCCTGNNATGTTGTCNCGGAGGACCTTACGGNGT
JMSF031P08+ GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
                      ____________________________________________________________
consensus GACGGCGAATGGCCGGCTTCGTGATGCCCTG-GATGTTGTCCCGGAGGACCTTACGGTGT
 
. : . : . : . : . : . :
JMFN039D15+ CGTTTCGCTCCTCCCTTTCCCAAACCCTTACCGCCCTTTCCACGCCCAGACATCTTCGAA
JMFS013A04+ CGTTTCGCTCCTCCCTTTCCCAAACCCTTACCGCCCTTTCCACGCCCAGACATCTTCGAA
JMFS078H12+ CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
JMSF049I03+ CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
JMFN011D22+ CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
rJMSF044L03- CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
rJMSF031P08- CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
rJMSF013B17- CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
JMSF044L03+ CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
JMFN011E02+ CGTTTCGCTCCTCCCTTTCCCAAACCCTTACCGCCCTTTCCACGCCCAGACATTTTCAGC
JMFN029M22+ CGTTTCGCTCCTCCCTTTCCCAAACCCTTACCGCCCTTTCCACGCCCAGACATCTTCGAA
JMSF013B17+ CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
rJMSF049I03- GGTTTCGCTCCNCCCTTTCCCAAACCCTTACCGCCATTTCCGCGCCCAGACATCTTCNAA
rJMSF017B17- CGTTTCGCTCCACCCTTTCCNAAACCCTTACCGCCCTTTCCGCGCCCAGANATCNTCAAA
JMSF031P08+ CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
                      ____________________________________________________________
consensus CGTTTCGCTCCACCCTTTCCCAAACCCTTACCGCCCTTTCCGCGCCCAGACATCTTCGAA
 
. : . : . : . : . : . :
JMFN039D15+ AATTTCTTCTCTTCTTCGCTTA
JMFS013A04+ AATTTCTTCTCTTCTTCGCTTAGGAA
JMFS078H12+ AATTTCTTCTCTTCTTCGCTAAGGAAA
JMSF049I03+ AATTTCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGG
JMFN011D22+ AATTTCTTCTCTTCTTCGCTAAGGAA
rJMSF044L03- AATTTCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGGTC
rJMSF031P08- AATTTCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGGTC
rJMSF013B17- AATTTCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGGTC
JMSF044L03+ AATTTCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGGTC
JMFN011E02+ AAATTCTTCTCTTCTTCGCTAAGGAAATCTGA
JMFN029M22+ AATTTCTTCTCTTCTTCGCTTAGGAAATCTGACCTTTCAAA
JMSF013B17+ AATTTCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGGTC
rJMSF049I03- AATNNCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGG
rJMSF017B17- AATTTCTTCTNTTCTTCNCTAANGANATCTGACCTTTCNNACAATTTTGATTGCTCGG
JMSF031P08+ AATTTCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGGTC
                      ____________________________________________________________
consensus AATTTCTTCTCTTCTTCGCTAAGGAAATCTGACCTTTCAAACAATTTTGATTGCTCGGTC