Contig 000829:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023D16Sequence555000829 (7)gb|ACJ84523.1|8e-101unknown [Medicago truncatula]762006954 (7)ref|XP_009770220.1|1e-104PREDICTED: mitogen-activated protein kinase homolog NTF4 [Nicotiana sylvestris]
JMFF024J21Sequence491000829 (7)gb|ACJ84523.1|7e-85unknown [Medicago truncatula]736006954 (7)ref|XP_009770220.1|4e-100PREDICTED: mitogen-activated protein kinase homolog NTF4 [Nicotiana sylvestris]
JMFF025A08Sequence551000829 (7)gb|ACJ84523.1|4e-100unknown [Medicago truncatula]738006954 (7)ref|XP_009770220.1|4e-100PREDICTED: mitogen-activated protein kinase homolog NTF4 [Nicotiana sylvestris]
JMFF038P03Sequence525000829 (7)gb|ABO65104.1|4e-88mitogen-activated protein kinase Naf4, partial [Nicotiana attenuata]738006954 (7)ref|XP_009770220.1|9e-77PREDICTED: mitogen-activated protein kinase homolog NTF4 [Nicotiana sylvestris]
JMFF041M21Sequence643000829 (7)gb|KCW63920.1|1e-125hypothetical protein EUGRSUZ_G01599 [Eucalyptus grandis]574006954 (7)gb|AHX99575.1|4e-46mitogen-activated protein kinase 6 [Betula platyphylla]
JMFF044N23Sequence636000829 (7)gb|ACJ84523.1|1e-94unknown [Medicago truncatula]629006954 (7)gb|AHX99575.1|9e-47mitogen-activated protein kinase 6 [Betula platyphylla]
JMSF031M21Sequence621000829 (7)gb|ACJ84523.1|3e-62unknown [Medicago truncatula]672006954 (7)gb|ABB16418.1|7e-120mitogen-activated protein kinase Ntf4-2 [Nicotiana tabacum]

Alignment

This contig is upended


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JMFF041M21+                                           ATCACATATCTTCAGATCACAATTGGCG
                      ____________________________________________________________
consensus                                             ATCACATATCTTCAGATCACAATTGGCG
 
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JMFF041M21+           TTTAACAGAAGATTGCTAGGCTTCAAGTCTCTATGCAAAACATNTGCAGAGTGTATATAT
                      ____________________________________________________________
consensus             TTTAACAGAAGATTGCTAGGCTTCAAGTCTCTATGCAAAACATNTGCAGAGTGTATATAT
 
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JMFF044N23+                              GATACAAGAAATACTGACAGTGTCCTTCTGACAAGCCTGNA
JMFF041M21+           TTCAACCCACGGAGAATCTGATACAAGAAATACTGACAGTGTTCCTCTGACAAGCCTTGA
JMFF025A08+                              GATACAAGAAATACTGACAGTGTTCCTCTGACAAGCCTTGA
JMFF038P03+                                                       CTCTGACAAGCCTTGA
JMFF023D16+                              GATACAAGAAATACTGACAGTGTTCCTCTGACAAGCCTTGA
                      ____________________________________________________________
consensus             TTCAACCCACGGAGAATCTGATACAAGAAATACTGACAGTGTTCCTCTGACAAGCCTTGA
 
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JMFF044N23+           TTGGAGCGAATAATNTGATGGAGATCAGTGTCCATAAGCTCATATGCAATATATACATCA
JMFF041M21+           TTGGAGCGAATAATTTGATGGAGATCAGTGTCCATAAGCTCATATGCAATATATACATCA
JMFF025A08+           TTGGAGCGAATAATTTGATGGAGATCAGTGTCCATAAGCTCATATGCAATATATACATCA
JMFF038P03+           TTGGAGCGAATAATTTGATGGAGATCAGTGTCCATAAGCTCATATGCAATATATACATCA
JMFF024J21+                        TTTGATGGAGATCAGTGTCCATAAGCTCATATGCAATATATACATCA
JMFF023D16+           TTGGAGCGAATAATTTGATGGAGATCAGTGTCCATAAGCTCATATGCAATATATACATCA
                      ____________________________________________________________
consensus             TTGGAGCGAATAATTTGATGGAGATCAGTGTCCATAAGCTCATATGCAATATATACATCA
 
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JMFF044N23+           TTGAATGACTCTCTNTGCGGTGGTGGTATTATATCTCTTATTCCAACAATATTCTCGTGA
JMFF041M21+           TTGAATGACTCTCTTTGCGGTGGTGGTATTATATCTCTTATTCCAACAATATTCTCGTGA
JMFF025A08+           TTGAATGACTCTCTTTGCGGTGGTGGTATTATATCTCTTATTCCAACAATATTCTCGTGA
JMFF038P03+           TTGAATGACTCTCTTTGCGGTGGTGGTATTATATCTCTTATTCCAACAATATTCTCGTGA
JMFF024J21+           TTGAATGACTCTCTTTGCGGTGGTGGTATTATATCTCTTATTCCAACAATATTCTCGTGA
JMFF023D16+           TTGAATGACTCTCTTTGCGGTGGTGGTATTATATCTCTTATTCCAACAATATTCTCGTGA
JMSF031M21+                                                 TATTCCAACAATATTCTCGTGA
                      ____________________________________________________________
consensus             TTGAATGACTCTCTTTGCGGTGGTGGTATTATATCTCTTATTCCAACAATATTCTCGTGA
 
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JMFF044N23+           TCCATGTGGCGAAGCAGCTTAATCTCACGAAGAGTCCTCTTGGCATCAATTCTGTTATCA
JMFF041M21+           TCCATGTGGCGAAGCAGCTTAATCTCACGAAGAGTCCTCTTGGCATCAATTCTGTTATCA
JMFF025A08+           TCCATGTGGCGAAGCAGCTTAATCTCACGAAGAGTCCTCTTGGCATCAATTCTGTTATCA
JMFF038P03+           TCCATGTGGCGAAGCAGCTTAATCTCACGAAGAGTCCTCTTGGCATCAATTCTGTTATCA
JMFF024J21+           TCCATGTGGCGAAGCAGCTTAATCTCACGAAGAGTCCTCTTGGCATCAATTCTGTTATCA
JMFF023D16+           TCCATGTGGCGAAGCAGCTTAATCTCACGAAGAGTCCTCTTGGCATCAATTCTGTTATCA
JMSF031M21+           TCCATGTGGCGAAGCAGCTTAATCTCACGAAGAGTCCTCTTGGCATCAATTCTGTTATCA
                      ____________________________________________________________
consensus             TCCATGTGGCGAAGCAGCTTAATCTCACGAAGAGTCCTCTTGGCATCAATTCTGTTATCA
 
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JMFF044N23+           AATGCATTCGCAATTTTCTTCAGTGCTACGTGCTCGTTTGTTTCCGAATTCAAAGCAGAA
JMFF041M21+           AATGCATTCGCAATTTTCTTCAGTGCTACGTGCTCGTTTGTTTCCGAATTCAAAGCAGAA
JMFF025A08+           AATGCATTCGCAATTTTCTTCAGTGCTACGTGCTCGTTTGTTTCCGAATTCAAAGCAGAA
JMFF038P03+           AATGCATTCGCAATTTTCTTCAGTGCTACGTGCTCGTTTGTTTCCGAATTCAAAGCAGAA
JMFF024J21+           AATGCATTCGCAATTTTCTTCAGTGCTACGTGCTCGTTTGTTTCCGAATTCAAAGCAGAA
JMFF023D16+           AATGCATTCGCAATTTTCTTCAGTGCTACGTGCTCGTTTGTTTCCGAATTCAAAGCAGAA
JMSF031M21+           AATGCATTCGCAATTTTCTTCAGTGCTACGTGCTCGTTTGTTTCCGAATTCAAAGCAGAA
                      ____________________________________________________________
consensus             AATGCATTCGCAATTTTCTTCAGTGCTACGTGCTCGTTTGTTTCCGAATTCAAAGCAGAA
 
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JMFF044N23+           CAGACGATACCATAGGCGCCTTTGCCAATAGGCATGATGGGGGGCTTGTACTTGGCGGTG
JMFF041M21+           CAGACGATACCATAGGCGCCTTTGCCAATAGGCATGATGGGGGGCTTGTACTTGGCGGTG
JMFF025A08+           CAGACGATACCATAGGCGCCTTTGCCAATAGGCATGATGGGGGGCTTGTACTTGGCGGTG
JMFF038P03+           CAGACGATACCATAGGCGCCTTTGCCAATAGGCATGATGGGGGGCTTGTACTTGGCGGTG
JMFF024J21+           CAGACGATACCATAGGCGCCTTTGCCAATAGGCATGATGGGGGGCTTGTACTTGGCGGTG
JMFF023D16+           CAGACGATACCATAGGCGCCTTTGCCAATAGGCATGATGGGGGGCTTGTACTTGGCGGTG
JMSF031M21+           CAGACGATACCATAGGCGCCTTTGCCAATAGGCATGATGGGGGGCTTGTACTTGGCGGTG
                      ____________________________________________________________
consensus             CAGACGATACCATAGGCGCCTTTGCCAATAGGCATGATGGGGGGCTTGTACTTGGCGGTG
 
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JMFF044N23+           ATCTCAAATACGTTGCCGAAGATGTTGTATTGGATGAATCTGCCGCCGTGGCTGAGCGTC
JMFF041M21+           ATCTCAAATACGTTGCCGAAGATGTTGTATTGGATGAATCTGCCGCCGTGGCTGAGCGTC
JMFF025A08+           ATCTCAAATACGTTGCCGAAGATGTTGTATTGGATGAATCTGCCGCCGTGGCTGAGCGTC
JMFF038P03+           ATCTCAAATACGTTGCCGAAGATGTTGTATTGGATGAATCTGCCGCCGTGGCTGAGCGTC
JMFF024J21+           ATCTCAAATACGTTGCCGAAGATGTTGTATTGGATGAATCTGCCGCCGTGGCTGAGCGTC
JMFF023D16+           ATCTCAAATACGTTGCCGAAGATGTTGTATTGGATGAATCTGCCGCCGTGGCTGAGCGTC
JMSF031M21+           ATCTCAAATACGTTGCCGAAGATGTTGTATTGGATGAATCTGCCGCCGTGGCTGAGCGTC
                      ____________________________________________________________
consensus             ATCTCAAATACGTTGCCGAAGATGTTGTATTGGATGAATCTGCCGCCGTGGCTGAGCGTC
 
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JMFF044N23+           GCCGGAATATTGTCGATCCC                                        
JMFF041M21+           GCCGGAATATTGTCGATCCCCATCATCTGTGGCGGCGGCGGCGGCGGTTGCTGGTCGGTC
JMFF025A08+           GCCGGAATATTGTCGATCCCCATCATCTGTGGCGGCGGCGGCGGCGGTTGCTGGTCGGTC
JMFF038P03+           GCCGGAATATTGTCGATCCCCATCATCTGTGGCGGCGGCGGCGGCGGTTGCTGGTCGGTC
JMFF024J21+           GCCGGAATATTGTCGATCCCCATCATCTGTGGCGGCGGCGGCGGCGGTTGCTGGTCGGTC
JMFF023D16+           GCCGGAATATTGTCGATCCCCATCATCTGTGGCGGCGGCGGCGGCGGTTGCTGGTCGGTC
JMSF031M21+           GCCGGAATATTGTCGATCCCCATCATCTGTGGCGGCGGCGGCGGCGGTTGCTGGTCGGTC
                      ____________________________________________________________
consensus             GCCGGAATATTGTCGATCCCCATCATCTGTGGCGGCGGCGGCGGCGGTTGCTGGTCGGTC
 
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JMFF041M21+           TGCTGCTGCGGAGCAGCCTCCGACATCA-ACGTATCCGCCGGCTGAGCTGAACCTCCGTC
JMFF025A08+           TGCTGCTGCGGAGCAGCCTCCGACATCA-ACGTATCCGCCGGCTGAGCTGAACCTCCGTC
JMFF038P03+           TGCTGCTGCGGAGCAGCCTCCGACATCANACGTATCCGCCGGCTGAGCTGAACCTCCGTC
JMFF024J21+           TGCTGCTGCGGAGCAGCCTCCGACATCA-ACGTATCCGCCGGCTGAGCTGAACCTCCGTC
JMFF023D16+           TGCTGCTGCGGAGCAGCCTCCGACATCA-ACGTATCCGCCGGCTGAGCTGAACCTCCGTC
JMSF031M21+           TGCTGCTGCGGAGCAGCCTCCGACATCA-ACGTATCCGCCGGCTGAGCTGAACCTCCGTC
                      ____________________________________________________________
consensus             TGCTGCTGCGGAGCAGCCTCCGACATCA-ACGTATCCGCCGGCTGAGCTGAACCTCCGTC
 
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JMFF041M21+           CATTTTCTCCTCC                                               
JMFF025A08+           CATTTTCTCCTCCGCCAAAAATGCCAAAC                               
JMFF038P03+           CATTTTCTCCTCCGCCAAAAATGCCAAAC                               
JMFF024J21+           CATTTTCTCCTCCGCCAAAAAT                                      
JMFF023D16+           CATTTTCTCCTCCGCCAAAAATGCCAAAC                               
JMSF031M21+           CATTTTCTCCTCCGCCAAAAATGCCAAACAACGATAATTGCAATTATTTTGCTGAAAGAG
                      ____________________________________________________________
consensus             CATTTTCTCCTCCGCCAAAAATGCCAAACAACGATAATTGCAATTATTTTGCTGAAAGAG
 
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JMSF031M21+           TACTAAGGATAACAATAATACAACAAATTAAAATCGTAATTATAAACCCTAAATTAGAAC
                      ____________________________________________________________
consensus             TACTAAGGATAACAATAATACAACAAATTAAAATCGTAATTATAAACCCTAAATTAGAAC
 
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JMSF031M21+           TTTTATTCACTTCGCCCGTATATTTATGGAGCTGATAATCTGGCTATTATGCTAAGTTCC
                      ____________________________________________________________
consensus             TTTTATTCACTTCGCCCGTATATTTATGGAGCTGATAATCTGGCTATTATGCTAAGTTCC
 
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JMSF031M21+           TCTGTCCCTTTCCCAGTTTCCCTCTTGTCAGGTCATTTGGTCAAAGAACTGATGTTCCAC
                      ____________________________________________________________
consensus             TCTGTCCCTTTCCCAGTTTCCCTCTTGTCAGGTCATTTGGTCAAAGAACTGATGTTCCAC