Contig 000828:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008H07Sequence596000828 (5)ref|XP_009798786.1|2e-63PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Nicotiana sylv695001047 (4)gb|EYU37037.1|8e-35hypothetical protein MIMGU_mgv1a0063811mg, partial [Erythranthe guttata]
JMSF028I05Sequence661000828 (5)ref|XP_009798786.1|5e-93PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Nicotiana sylv745001047 (4)gb|EYU37037.1|7e-52hypothetical protein MIMGU_mgv1a0063811mg, partial [Erythranthe guttata]
JMSF031M05Sequence660000828 (5)ref|XP_009798786.1|5e-31PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Nicotiana sylv664001047 (4)gb|EYU37037.1|2e-56hypothetical protein MIMGU_mgv1a0063811mg, partial [Erythranthe guttata]
JMSF032M05Sequence677000828 (5)ref|XP_009798786.1|5e-34PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Nicotiana sylv
JMSF034C23Sequence309000828 (5)ref|XP_009587313.1|1e-16PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Nicotiana tome524001047 (4)gb|EYU37037.1|8e-10hypothetical protein MIMGU_mgv1a0063811mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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JMSF028I05+                                CCGGCACTCCATCGGCGATTGCTGTGTCCTCCAATGTGT
                      ____________________________________________________________
consensus                                  CCGGCACTCCATCGGCGATTGCTGTGTCCTCCAATGTGT
 
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JMSF028I05+           GAAAACATGACCCAAAATCGTGGGATGCGACGAAGACGTGGTCGGCGCCGCGGCTGCGGT
                      ____________________________________________________________
consensus             GAAAACATGACCCAAAATCGTGGGATGCGACGAAGACGTGGTCGGCGCCGCGGCTGCGGT
 
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JMSF028I05+           TCCAGAAGGGAAGGTCAGAGGAAATGAGGCGAATGGCGGAGGAAATAAGATTCCGGGCGT
JMFF008H07+                                                               CCGGGCGT
                      ____________________________________________________________
consensus             TCCAGAAGGGAAGGTCAGAGGAAATGAGGCGAATGGCGGAGGAAATAAGATTCCGGGCGT
 
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JMSF028I05+           GACCAATCGCCGGGAAGCCATTGACCGTGCTGAAATTGCAAGAAACGTAAACGGGGACGA
JMFF008H07+           GACCAATCGCCGGGAAGCCATTGACCGTGCTGAAATTGCAAGAAACGTAAACGGGGACGA
                      ____________________________________________________________
consensus             GACCAATCGCCGGGAAGCCATTGACCGTGCTGAAATTGCAAGAAACGTAAACGGGGACGA
 
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JMSF028I05+           AGAAAAAGTCAGCCTCCCACGGGTCAAACGTGCGAACCTCGCTGCTCGCCAAGGCTCTGT
JMFF008H07+           AGAAAAAGTCAGCCTCCCACGGGTCAAACGTGCGAACCTCGCTGCTCGCCAAGGCTCTGT
JMSF032M05+                                                      GCTCGCCAAGGCTCTGT
                      ____________________________________________________________
consensus             AGAAAAAGTCAGCCTCCCACGGGTCAAACGTGCGAACCTCGCTGCTCGCCAAGGCTCTGT
 
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JMSF028I05+           GTATAGCCACCTCGGAAGCAAACAAATGGCTGCTACACCGCTCATTCAACCAATCAACGT
JMFF008H07+           GTATAGCCACCTCGGAAGCAAACAAATGGCTGCTACACCGCTCATTCAACCAATCAACGT
JMSF032M05+           GTATAGCCACCTCGGAAGCAAACAAATGGCTGCTACACCGCTCATTCAACCAATCAACGT
JMSF031M05+           GTATAGCCACCTCGGAAGCAAACAAATGGCTGCTACACCGCTCATTCAACCAATCAACGT
                      ____________________________________________________________
consensus             GTATAGCCACCTCGGAAGCAAACAAATGGCTGCTACACCGCTCATTCAACCAATCAACGT
 
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JMSF028I05+           TATATTTCGCCGGCAAATCGTATATGTAAACCTTCAGATCCTTAAACACATCTTGGTGGG
JMFF008H07+           TATATTTCGCCGGCAAATCGTATATGTAAACCTTCAGATCCTTAAACACATCTTGGTGGG
JMSF032M05+           TATATTTCGCCGGCAAATCGTATATGTAAACCTTCAGATCCTTAAACACATCTTGGTGGG
JMSF034C23+                              GTATATGTAAACCTTCNGATCCTTAAACACATCTNGGTGGG
JMSF031M05+           TATATTTCGCCGGCAAATCGTATATGTAAACCTTCAGATCCTTAAACACATCTTGGTGGG
                      ____________________________________________________________
consensus             TATATTTCGCCGGCAAATCGTATATGTAAACCTTCAGATCCTTAAACACATCTTGGTGGG
 
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JMSF028I05+           TGTTGGGCTGGTGGAGAAGAGAAGAGTTATGGGATTCGATGAGGGCGCGAGAAGCTTTAG
JMFF008H07+           TGTTGGGCTGGTGGAGAAGAGAAGAGTTATGGGATTCGATGAGGGCGCGAGAAGCTTTAG
JMSF032M05+           TGTTGGGCTGGTGGAGAAGAGAAGAGTTATGGGATTCGATGAGGGCGCGAGAAGCTTTAG
JMSF034C23+           TGTTNGGCTNGTGGAGAAGAGAAGAGTTATGGGNTTCGATGAGGGCGCGAGNAGCTTTAG
JMSF031M05+           TGTTGGGCTGGTGGAGAAGAGAAGAGTTATGGGATTCGATGAGGGCGCGAGAAGCTTTAG
                      ____________________________________________________________
consensus             TGTTGGGCTGGTGGAGAAGAGAAGAGTTATGGGATTCGATGAGGGCGCGAGAAGCTTTAG
 
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JMSF028I05+           ATTGGCGGACGACGGTGGTCCGGGAGATGATGGCGGAGGTGGCAGGTTTATGAGTGAAAA
JMFF008H07+           ATTGGCGGACGACGGTGGTCCGGGAGATGATGGCGGAGGTGGCAGGTTTATGAGTGAAAA
JMSF032M05+           ATTGGCGGACGACGGTGGTCCGGGAGATGATGGCGGAGGTGGCAGGTTTATGAGTGAAAA
JMSF034C23+           ATTGGCGGNCGACGGTGGTCCNGGAGATGATGGCNGAGGTGGCAGGTTTATGAGTGAAAA
JMSF031M05+           ATTGGCGGACGACGGTGGTCCGGGAGATGATGGCGGAGGTGGCAGGTTTATGAGTGAAAA
                      ____________________________________________________________
consensus             ATTGGCGGACGACGGTGGTCCGGGAGATGATGGCGGAGGTGGCAGGTTTATGAGTGAAAA
 
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JMSF028I05+           TGAAAGAGGCGAAGAAATAGAAAGAAAGGGAAAACCAGAGAAGCCATTTGAAATATCTAT
JMFF008H07+           TGAAAGAGGCGAAGAAATAGAAAGAAAGGGAAAACCAGAGAAGCCATTTGAAATATCTAT
JMSF032M05+           TGAAAGAGGCGAAGAAATAGAAAGAAAGGGAAAACCAGAGAAGCCATTTGAAATATCTAT
JMSF034C23+           TGAAAGAGGCGAAGAAATAGAAAGAAANGGAAAACCAGAGAAGCCATTTGAAATATCTAT
JMSF031M05+           TGAAAGAGGCGAAGAAATAGAAAGAAAGGGAAAACCAGAGAAGCCATTTGAAATATCTAT
                      ____________________________________________________________
consensus             TGAAAGAGGCGAAGAAATAGAAAGAAAGGGAAAACCAGAGAAGCCATTTGAAATATCTAT
 
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JMSF028I05+           GGCAGAAGCTCTTCTCAGAGGCCTGTCTTCCTGGTCTCAACAACTTCATCCTCACATAAA
JMFF008H07+           GGCAGAAGCTCTTCTCAGAGGCCTGTCTTCCTGGTCTCAACAACTTCATCCTCACATAAA
JMSF032M05+           GGCAGAAGCTCTTCTCAGAGGCCTGTCTTCCTGGTCTCAACAACTTCATCCTCACATAAA
JMSF034C23+           GGCAGAAGCTCTTCTCAGAGGCCTGTCTTCCTGGTCTCAACAACTTCATCCTCACATAAA
JMSF031M05+           GGCAGAAGCTCTTCTCAGAGGCCTGTCTTCCTGGTCTCAACAACTTCATCCTCACATAAA
                      ____________________________________________________________
consensus             GGCAGAAGCTCTTCTCAGAGGCCTGTCTTCCTGGTCTCAACAACTTCATCCTCACATAAA
 
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JMSF028I05+           ACCCTTTGTTCCTCGAAGTTT                                       
JMFF008H07+           ACCCTTTGTTCCTCGAAGTTTGTCTTCTCATCTCCGTCATCTCTCCCCTATTAATCGATC
JMSF032M05+           ACCCTTTGTTCCTCGAAGTTTGTCTTCTCATCTCCGTCATCTCTCCCCTATTAATCGATC
JMSF034C23+           NCCCTTTGTTCCTCNAAGTTTG                                      
JMSF031M05+           ACCCTTTGTTCCTCGAAGTTTGTCTTCTCATCTCCGTCATCTCTCCCCTATTAATCGATC
                      ____________________________________________________________
consensus             ACCCTTTGTTCCTCGAAGTTTGTCTTCTCATCTCCGTCATCTCTCCCCTATTAATCGATC
 
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JMFF008H07+           AAAACAGGGGAGGCGACGGAGCTCCAG                                 
JMSF032M05+           AAAACAGGGGAGGCGACGGAGCTCCAGCCCAGCCTGCAGGTGAGAGGTGGCTATCGGGGT
JMSF031M05+           AAAACAGGGGAGGCGACGGAGCTCCAGCCCAGCCTGCAGGTGAGAGGTGGCTATCGGGGT
                      ____________________________________________________________
consensus             AAAACAGGGGAGGCGACGGAGCTCCAGCCCAGCCTGCAGGTGAGAGGTGGCTATCGGGGT
 
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JMSF032M05+           TTGGTTTTGGTCTGAAGTAGAATCCAAGAAACAAGGGTGAAAACTGAAAATTTTGAAAAA
JMSF031M05+           TTGGTTTTGGTCTGAAGTAGAATCCAAGAAACAAGGGTGAAAACTGAAAATTTTGAAAAA
                      ____________________________________________________________
consensus             TTGGTTTTGGTCTGAAGTAGAATCCAAGAAACAAGGGTGAAAACTGAAAATTTTGAAAAA
 
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JMSF032M05+           AGAATGGTTTTTTGGTTGATGGTTCGTTTTAGCTTGAAGAATAAAGAATTAAACAAATAT
JMSF031M05+           AGAATGGTTTTTTGGTTGATGGTTCGTTTTAGCTTGAAGAATAAAGAATTAAACAAATAT
                      ____________________________________________________________
consensus             AGAATGGTTTTTTGGTTGATGGTTCGTTTTAGCTTGAAGAATAAAGAATTAAACAAATAT
 
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JMSF032M05+           GATGTGGTGTATAAGATAAGTTACCCAAAATAATCAAGAACTATATTTTTGTTAAATTCC
JMSF031M05+           GATGTGGTGTATAAGATAAGTTACCCAAAATAATCAAGAACTATATTTTTGTTAAATTCC
                      ____________________________________________________________
consensus             GATGTGGTGTATAAGATAAGTTACCCAAAATAATCAAGAACTATATTTTTGTTAAATTCC