Contig 000827:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006O20Sequence507000827 (3)ref|XP_011079628.1|5e-79PREDICTED: endoglucanase 17 [Sesamum indicum]716014019 (3)emb|CBI36884.3|1e-135unnamed protein product [Vitis vinifera]
JMSF001D22Sequence337000827 (3)ref|XP_011079628.1|7e-35PREDICTED: endoglucanase 17 [Sesamum indicum]747014019 (3)ref|NP_001234882.1|4e-147endo-1,4-beta-glucanase precursor [Solanum lycopersicum] gb|AAA80495.1| endo-1,4
JMSF031L07Sequence701000827 (3)ref|XP_011079628.1|1e-102PREDICTED: endoglucanase 17 [Sesamum indicum]734014019 (3)emb|CBI36884.3|2e-114unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMSF031L07+                              TCCTGATTAGCAGCTTGGAGTAAGTGGGGTCACATCTTNTG
                      ____________________________________________________________
consensus                                TCCTGATTAGCAGCTTGGAGTAAGTGGGGTCACATCTTNTG
 
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JMSF031L07+           AACACCAAAGACGCGGCGGCCAGAGCCGCCGCAGNTTTCCGCGGCAACNTCAGTCCCCGG
                      ____________________________________________________________
consensus             AACACCAAAGACGCGGCGGCCAGAGCCGCCGCAGNTTTCCGCGGCAACNTCAGTCCCCGG
 
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JMSF031L07+           ATTGTTCTTGTCAACCTTGTACACGCTTCTTGGGGTGTCCATATCCTCCGGCCTCTCCCA
                      ____________________________________________________________
consensus             ATTGTTCTTGTCAACCTTGTACACGCTTCTTGGGGTGTCCATATCCTCCGGCCTCTCCCA
 
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JMFF006O20+                                        CCTGGACATAAATGGTGTCTGGATAAGCAGT
JMSF031L07+           ACACGCATGGTCTCTGTTCGCATCTCCAACCTGGACATAAATGGTGTCTGGATAAGCAGT
                      ____________________________________________________________
consensus             ACACGCATGGTCTCTGTTCGCATCTCCAACCTGGACATAAATGGTGTCTGGATAAGCAGT
 
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JMFF006O20+           GGCTTTAAGAAGATAGTCAGTAGCCCAGCGAATGGCTTCTCTAGCATTCTGAAGCTCGCC
JMSF031L07+           GGCTTTAAGAAGATAGTCAGTAGCCCAGCGAATGGCTTCTCTAGCATTCTGAAGCTCGCC
                      ____________________________________________________________
consensus             GGCTTTAAGAAGATAGTCAGTAGCCCAGCGAATGGCTTCTCTAGCATTCTGAAGCTCGCC
 
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JMFF006O20+           CTTCATCAGGCCACCAAACTCGAGCACACTCCACGACAGCATTGTGGTGGTGAACGCCAT
JMSF031L07+           CTTCATCAGGCCACCAAACTCGAGCACACTCCACGACAGCATTGTGGTGGTGAACGCCAT
                      ____________________________________________________________
consensus             CTTCATCAGGCCACCAAACTCGAGCACACTCCACGACAGCATTGTGGTGGTGAACGCCAT
 
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JMFF006O20+           CGGAAAACCAAACTTCACATTGTCGCCGGCATCATAGTACCCTCCGACCAAATCAACATG
JMSF001D22+                                 TCGCCGGCATCATAGTACCNTCCGACCAAATCAACATG
JMSF031L07+           CGGAAAACCAAACTTCACATTGTCGCCGGCATCATAGTACCCTCCGACCAAATCAACATG
                      ____________________________________________________________
consensus             CGGAAAACCAAACTTCACATTGTCGCCGGCATCATAGTACCCTCCGACCAAATCAACATG
 
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JMFF006O20+           CATGGCGGAGCCATCAGAAAGCCCGGAGTTTCTTCTCCAAGAAATCCTCTGGTTATTAGG
JMSF001D22+           CATGGCGGAGCCATCAGAAAGCCCGGAGTTTCTTCTCCAAGAAATCCTCTGGTTATTAGG
JMSF031L07+           CATGGCGGAGCCATCAGAAAGCCCGGAGTTTCTTCTCCAAGAAATCCTCTGGTTATTAGG
                      ____________________________________________________________
consensus             CATGGCGGAGCCATCAGAAAGCCCGGAGTTTCTTCTCCAAGAAATCCTCTGGTTATTAGG
 
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JMFF006O20+           GAGTTTCCCGGACCTCTGGCCCTCGTAGTAGAGGATGGACTTAGTGAGGGCATCTCTGTA
JMSF001D22+           GAGTTTCCCGGACCTCTGGCCCTCGTAGTAGAGGATGGACTTAGTGAGGGCATCTCTGTA
JMSF031L07+           GAGTTTCCCGGACCTCTGGCCCTCGTAGTAGAGGATGGACTTAGTGAGGGCATCTCTGTA
                      ____________________________________________________________
consensus             GAGTTTCCCGGACCTCTGGCCCTCGTAGTAGAGGATGGACTTAGTGAGGGCATCTCTGTA
 
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JMFF006O20+           GTTGTGAGAAGCGAAACGAGGGTGGTTATGGTGGCGGTGTGCAGGGTAAGCGTTGCAGAA
JMSF001D22+           GTTGTGAGAAGCGAAACGAGGGTGGTTATGGTGGCGGTGTGCAGGGTAAGCGTTGCAGAA
JMSF031L07+           GTTGTGAGAAGCGAAACGAGGGTGGTTATGGTGGCGGTGTGCAGGGTAAGCGTTGCAGAA
                      ____________________________________________________________
consensus             GTTGTGAGAAGCGAAACGAGGGTGGTTATGGTGGCGGTGTGCAGGGTAAGCGTTGCAGAA
 
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JMFF006O20+           AAACAGAGGAGCGGTGAAGAAGCATAACAGGAAGATGAAGGACAACGTTAAAGAAGAAGA
JMSF001D22+           AAACAGAGGAGCGGTGAAGAAGCATAACAGGAAGATGAAGGACAACGTTAAAGAAGAAGA
JMSF031L07+           AAACAGAGGAGCGGTGAAGAAGCATAACAGGAAGATGAAGGACAACGTTAAAGAAGAAGA
                      ____________________________________________________________
consensus             AAACAGAGGAGCGGTGAAGAAGCATAACAGGAAGATGAAGGACAACGTTAAAGAAGAAGA
 
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JMFF006O20+           AGCCATGTTGTTTTTTTGCTGTAGTAAAAGGAATCCCCAAACAACCTGCGAGAACC    
JMSF001D22+           AGCCATGTTGTTTTTTTGCTGTAGTAAAAGGAATCCCCAAACAACCTGCGAGAACC    
JMSF031L07+           AGCCATGTTGTTTTTTTGCTGTAGTAAAAGGAATCCCCAAACAACCTGCGAGAACCGCCT
                      ____________________________________________________________
consensus             AGCCATGTTGTTTTTTTGCTGTAGTAAAAGGAATCCCCAAACAACCTGCGAGAACCGCCT