Contig 000819:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS040C05Sequence651000819 (4)ref|XP_006340190.1|6e-64PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like iso
JMFS127H06Sequence619000819 (4)ref|XP_006340190.1|9e-60PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like iso
JMSF007M19Sequence335000819 (4)
JMSF030O07Sequence686000819 (4)ref|XP_006340190.1|1e-63PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3-like iso

Alignment

This contig is upended


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JMFS127H06+                                                                      C
JMFS040C05+                                                            CATATCACAAC
JMSF030O07+                                             TTCCGCAGCATTAGACATATCACACC
                      ____________________________________________________________
consensus                                               TTCCGCAGCATTAGACATATCACACC
 
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JMFS127H06+           CTTGCTAAAATATCCAGCCAGCAATGCACTATGAGGATGGCTTGATTCCAGAAAGGAAAA
JMFS040C05+           CTTGCTAAAATATCCAGCCAGCAATGCACTATGAGGATGGCTTGATTCCAGAAAGGAAAA
JMSF030O07+           CTTGCTAAAATATCCAGCCAGCAATGCACTATGAGGATGGCTTGATTCCAGAAAGGAAAA
                      ____________________________________________________________
consensus             CTTGCTAAAATATCCAGCCAGCAATGCACTATGAGGATGGCTTGATTCCAGAAAGGAAAA
 
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JMFS127H06+           GAGTAAATTCATTAACTCTTCCTCCTCAACCAGAGTTTTAAGGATAACATCAATTTCACA
JMFS040C05+           GAGTAAATTCATTAACTCTTCCTCCTCAACCAGAGTTTTAAGGATAACATCAATTTCACA
JMSF030O07+           GAGTAAATTCATTAACTCTTCCTCCTCAACCAGAGTTTTAAGGATAACATCAATTTCACA
                      ____________________________________________________________
consensus             GAGTAAATTCATTAACTCTTCCTCCTCAACCAGAGTTTTAAGGATAACATCAATTTCACA
 
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JMFS127H06+           CGTGAATATCTCACAGGCAATGAATGGAAACTTGAATGTCCGTTTGCTATCCGCATGGTC
JMFS040C05+           CGTGAATATCTCACAGGCAATGAATGGAAACTTGAATGTCCGTTTGCTATCCGCATGGTC
JMSF030O07+           CGTGAATATCTCACAGGCAATGAATGGAAACTTGAATGTCCGTTTGCTATCCGCATGGTC
                      ____________________________________________________________
consensus             CGTGAATATCTCACAGGCAATGAATGGAAACTTGAATGTCCGTTTGCTATCCGCATGGTC
 
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JMFS127H06+           AAGAGGTTCATCAACAATATAGTGCAGCAGCTGTTCGACCTGGGTACTCTCTCTCAAAAA
JMFS040C05+           AAGAGGTTCATCAACAATATAGTGCAGCAGCTGTTCGACCTGGGTACTCTCTCTCAAAAA
JMSF030O07+           AAGAGGTTCATCAACAATATAGTGCAGCAGCTGTTCGACCTGGGTACTCTCTCTCAAAAA
                      ____________________________________________________________
consensus             AAGAGGTTCATCAACAATATAGTGCAGCAGCTGTTCGACCTGGGTACTCTCTCTCAAAAA
 
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JMFS127H06+           ATTTATGAGGCGACCATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCATCAAGAAG
JMFS040C05+           ATTTATGAGGCGACCATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCATCAAGAAG
JMSF030O07+           ATTTATGAGGCGACCATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCATCAAGAAG
                      ____________________________________________________________
consensus             ATTTATGAGGCGACCATTCAAAGCTTTGCATTCTTGGATTATCTCCTCTTCATCAAGAAG
 
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JMFS127H06+           CTCTTCCAATGTGAAATTTTCCTTGTCCAATATGGCTTCGATCGGCGAAGAAGCCGAGAG
JMFS040C05+           CTCTTCCAATGTGAAATTTTCCTTGTCCAATATGGCTTCGATCGGCGAAGAAGCCGAGAG
JMSF007M19+                                    TCCAATATGGCTTCGATCGGCGAAGAAGCCGAGAG
JMSF030O07+           CTCTTCCAATGTGAAATTTTCCTTGTCCAATATGGCTTCGATCGGCGAAGAAGCCGAGAG
                      ____________________________________________________________
consensus             CTCTTCCAATGTGAAATTTTCCTTGTCCAATATGGCTTCGATCGGCGAAGAAGCCGAGAG
 
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JMFS127H06+           AGGTGGGAGCTTCCAAAACATATCTCCTGCCTAGGGATACAAGGCAACGTGACACGTATA
JMFS040C05+           AGGTGGGAGCTTCCAAAACATATCTC                                  
JMSF007M19+           AGGTGGGAGCTTCCAAAACATATCTCCTGCCTAGGGATACAAGGCAACGTGACACGTATA
JMSF030O07+           AGGTGGGAGCTTCCAAAACATATCTCCTGCCTAGGGATACAAGGCAACGTGACACGTATA
                      ____________________________________________________________
consensus             AGGTGGGAGCTTCCAAAACATATCTCCTGCCTAGGGATACAAGGCAACGTGACACGTATA
 
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JMFS127H06+           TCCCGCGAGAGGGCAAGCAGAAACCAAAATCCTAATATAAGAACAGATCTGTAAACCCTA
JMSF007M19+           TCCCGCGAGAGGGCAAGCAGAAACCAAAATCCTAATATAAGAACAGATCTGTAAACCCTA
JMSF030O07+           TCCCGCGAGAGGGCAAGCAGAAACCAAAATCCTAATATAAGAACAGATCTGTAAACCCTA
                      ____________________________________________________________
consensus             TCCCGCGAGAGGGCAAGCAGAAACCAAAATCCTAATATAAGAACAGATCTGTAAACCCTA
 
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JMFS127H06+           AAACTGAATCTCGGGTATGAGAGCTCAAGATTCGAGATGGAGATGCGTATGCATATAGGA
JMSF007M19+           AAACTGAATCTCGGGTATGAGAGCTCAAGATTCGAGATGGAGATGCGTATGCATATAGGA
JMSF030O07+           AAACTGAATCTCGGGTATGAGAGCTCAAGATTCGAGATGGAGATGCGTATGCATATAGGA
                      ____________________________________________________________
consensus             AAACTGAATCTCGGGTATGAGAGCTCAAGATTCGAGATGGAGATGCGTATGCATATAGGA
 
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JMFS127H06+           GACAGCAAAAAACCCTAAAGTATGGATAAGAAGAAGATCAACAGAAAGGAAAGCCGTAAA
JMSF007M19+           GACAGCAAAAAACCCTAAAGTATGGATAAGAAGAAGATCAACAGAAAGGAAAGCCGTAAA
JMSF030O07+           GACAGCAAAAAACCCTAAAGTATGGATAAGAAGAAGATCAACAGAAAGGAAAGCCGTAAA
                      ____________________________________________________________
consensus             GACAGCAAAAAACCCTAAAGTATGGATAAGAAGAAGATCAACAGAAAGGAAAGCCGTAAA
 
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JMFS127H06+           GATCGAAGCTT                                                 
JMSF007M19+           GATCGAAGCTTTAGAGAGAGAGAATCCGGGGAGGGAGAGAGTTTTCATAAAATGGCAGCC
JMSF030O07+           GATCGAAGCTTTAGAGAGAGAGAATCCGGGGAGGGAGAGAGTTTTCATAAAATGGCAGCC
                      ____________________________________________________________
consensus             GATCGAAGCTTTAGAGAGAGAGAATCCGGGGAGGGAGAGAGTTTTCATAAAATGGCAGCC