Contig 000818:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027L06Sequence522000818 (2)ref|XP_009774309.1|2e-48PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris]748005438 (2)emb|CDP05735.1|2e-86unnamed protein product [Coffea canephora]
JMSF030N21Sequence622000818 (2)ref|XP_009774309.1|2e-52PREDICTED: probable beta-1,3-galactosyltransferase 2 [Nicotiana sylvestris]705005438 (2)emb|CDP05735.1|4e-75unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF030N21+                                                 TTCTTGGTCAATTCTGGAATCT
                      ____________________________________________________________
consensus                                                   TTCTTGGTCAATTCTGGAATCT
 
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JMFF027L06+                   TCAGATATGGGAGAGCCACTAAGTATAGAATCCTGCAAAGTCCTTGCTGCTG
JMSF030N21+           TCAAGTCNTCAGATATGGGAGAGCCACTAAGTATAGAATCCTGCAAAGTCCTTGCTGCTG
                      ____________________________________________________________
consensus             TCAAGTCNTCAGATATGGGAGAGCCACTAAGTATAGAATCCTGCAAAGTCCTTGCTGCTG
 
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JMFF027L06+           CCAACTCCATCTCTAAATTCGATATAGTTTTATCCAGAGTTCGTATAGCGTGTTTTGTGT
JMSF030N21+           CCAACTCCATCTCTAAATTCGATATAGGTTTATCCAGAGTTCGTATAGCGTGTTTTGTGT
                      ____________________________________________________________
consensus             CCAACTCCATCTCTAAATTCGATATAGTTTTATCCAGAGTTCGTATAGCGTGTTTTGTGT
 
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JMFF027L06+           TTGAAACATCCCCAATAGTATATCTGAGTTCAGTTCGTACATCCTTAATTCTAGGATCAC
JMSF030N21+           TTGAAACATCCCCAATAGTATATCTGAGTTCAGTTCGTACATCCTTAATTCTAGGATCAC
                      ____________________________________________________________
consensus             TTGAAACATCCCCAATAGTATATCTGAGTTCAGTTCGTACATCCTTAATTCTAGGATCAC
 
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JMFF027L06+           AGCCTTCTGAAGCTAACTTTATATCTCCATCCTCAATCTGCTTTGGCCTTGACATGCCCT
JMSF030N21+           AGCCTTCTGAAGCTAACTTTATATCTCCATCCTCAATCTGCTTTGGCCTTGACATGCCCT
                      ____________________________________________________________
consensus             AGCCTTCTGAAGCTAACTTTATATCTCCATCCTCAATCTGCTTTGGCCTTGACATGCCCT
 
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JMFF027L06+           TAGGTTCTGGCACTGCCCACATTCTGCCAGTAAAGAGCATCCCGACACAGAAGCATCCAA
JMSF030N21+           TAGGTTCTGGCACTGCCCACATTCTGCCAGTAAAGAGCATCCCGACACAGAAGCATCCAA
                      ____________________________________________________________
consensus             TAGGTTCTGGCACTGCCCACATTCTGCCAGTAAAGAGCATCCCGACACAGAAGCATCCAA
 
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JMFF027L06+           TGCAAAGCAAGATTGTTAATTTTCTGGAAACAAAACTTTTTGAGGTGGAGTCTGATCCTC
JMSF030N21+           TGCAAAGCAAGATTGTTAATTTTCTGGAAACAAAACTTTTTGAGGTGGAGTCTGATCCTC
                      ____________________________________________________________
consensus             TGCAAAGCAAGATTGTTAATTTTCTGGAAACAAAACTTTTTGAGGTGGAGTCTGATCCTC
 
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JMFF027L06+           TGGTTTTCCACCCCATTTT                                         
JMSF030N21+           TGGTTTTCCACCCCATTTTGCTTAAAATTCAATAAGCAGTTGAGAATTCAAGCACCACCC
                      ____________________________________________________________
consensus             TGGTTTTCCACCCCATTTTGCTTAAAATTCAATAAGCAGTTGAGAATTCAAGCACCACCC
 
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JMSF030N21+           ATTTCTGCTCTCATGTCGACGCAGCACAAGAAACAGAATTTGAGTTTCAAGACTGGATTT
                      ____________________________________________________________
consensus             ATTTCTGCTCTCATGTCGACGCAGCACAAGAAACAGAATTTGAGTTTCAAGACTGGATTT
 
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JMSF030N21+           TTGTGTTCTTGGTTTTTGTTTTCAGTTGAAATCAATGAGCTGGGAAGATGATGAAGAAGA
                      ____________________________________________________________
consensus             TTGTGTTCTTGGTTTTTGTTTTCAGTTGAAATCAATGAGCTGGGAAGATGATGAAGAAGA
 
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JMSF030N21+           AGAAGAAGAAGAAGAAATAAGAATTGGATGACCCACCCACCGCAATTGATTGCTTCTGCC
                      ____________________________________________________________
consensus             AGAAGAAGAAGAAGAAATAAGAATTGGATGACCCACCCACCGCAATTGATTGCTTCTGCC