Contig 000817:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022I01Sequence347000817 (10)ref|XP_009588165.1|4e-26PREDICTED: sodium-coupled neutral amino acid transporter 1-like isoform X4 [Nic733000817 (10)ref|XP_009765989.1|3e-73PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Nicotiana
JMFF026K03Sequence540000817 (10)ref|XP_009588163.1|1e-61PREDICTED: sodium-coupled neutral amino acid transporter 5-like isoform X3 [Nic747013739 (2)ref|XP_009765989.1|6e-84PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Nicotiana
JMFF028N16Sequence557000817 (10)ref|XP_009588163.1|2e-66PREDICTED: sodium-coupled neutral amino acid transporter 5-like isoform X3 [Nic721013739 (2)ref|XP_009765989.1|2e-59PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Nicotiana
JMFF032M19Sequence546000817 (10)ref|XP_009588163.1|1e-63PREDICTED: sodium-coupled neutral amino acid transporter 5-like isoform X3 [Nic
JMFF043L02Sequence617000817 (10)ref|XP_009588163.1|2e-81PREDICTED: sodium-coupled neutral amino acid transporter 5-like isoform X3 [Nic
JMSF030M20Sequence640000817 (10)ref|XP_009588163.1|2e-80PREDICTED: sodium-coupled neutral amino acid transporter 5-like isoform X3 [Nic654000817 (10)ref|XP_009765989.1|1e-76PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Nicotiana
JMSF052B22Sequence641000817 (10)ref|XP_009588163.1|1e-80PREDICTED: sodium-coupled neutral amino acid transporter 5-like isoform X3 [Nic866000817 (10)ref|XP_009618527.1|9e-112PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Nicotiana

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF022I01- TT
                      ____________________________________________________________
consensus TT
 
. : . : . : . : . : . :
rJMFF022I01- CNTATGATCTTTGAAACATANAGGGGATATTTTTTACAGAAATTTCCCANAACTCTCACA
                      ____________________________________________________________
consensus CNTATGATCTTTGAAACATANAGGGGATATTTTTTACAGAAATTTCCCANAACTCTCACA
 
. : . : . : . : . : . :
rJMFF022I01- ATTGGCCAAACAATCCCTTGTAGAACACACACAATAACAGATACACACAGACACTCCTTT
                      ____________________________________________________________
consensus ATTGGCCAAACAATCCCTTGTAGAACACACACAATAACAGATACACACAGACACTCCTTT
 
. : . : . : . : . : . :
rJMSF030M20- AAGTTGTATACATTGGTGTA
rJMFF022I01- CATGGAAACACAAGGAAACTATGAAGTGGTTCCACTGAACAAGTTGTATACATTGGTGTA
rJMSF052B22- AAGTTGTATACATTGGTGTA
                      ____________________________________________________________
consensus CATGGAAACACAAGGAAACTATGAAGTGGTTCCACTGAACAAGTTGTATACATTGGTGTA
 
. : . : . : . : . : . :
rJMSF030M20- AATAGCTAAACAGCTAGTTATGATCGCTTGAACGATCATGATTGTCGCTATAATCTTGTC
rJMFF022I01- AATAGCTAAACAGCTAGTTATGATCGCTTGAACGATCATGATTGTCGCTATAATCTTGTC
rJMSF052B22- AATAGCTAAACAGCTAGTTATGATCGCTTGAACGATCATGATTGTCGCTATAATCTTGTC
                      ____________________________________________________________
consensus AATAGCTAAACAGCTAGTTATGATCGCTTGAACGATCATGATTGTCGCTATAATCTTGTC
 
. : . : . : . : . : . :
rJMSF030M20- CTTTTTAGTAGATATTCCATGGATATCTCTTAAAGCAATGGCGCCGGGGAAGATGAAGGC
rJMFF022I01- CTTTTTAGTAGATATTCCATGGATATCTCTTAAAGCAATGGCGCCGGGGAAGATGAAGGC
rJMSF052B22- CTTTTTAGTAGATATTCCATGGATATCTCTTAAAGCAATGGCGCCGGGGAAGATGAAGGC
                      ____________________________________________________________
consensus CTTTTTAGTAGATATTCCATGGATATCTCTTAAAGCAATGGCGCCGGGGAAGATGAAGGC
 
. : . : . : . : . : . :
rJMSF030M20- GAGACACACAGCAGAAGTTGATCCCATGAACTGGAAAATGTACCATATGCTAGGAATAAG
rJMFF022I01- GAGACACACAGCAGAAGTTGATCCCATGAACTGGAAAATGTACCATATGCTAGGAATAAG
rJMSF052B22- GAGACACACAGCAGAAGTTGATCCCATGAACTGGAAAATGTACCATATGCTAGGAATAAG
                      ____________________________________________________________
consensus GAGACACACAGCAGAAGTTGATCCCATGAACTGGAAAATGTACCATATGCTAGGAATAAG
 
. : . : . : . : . : . :
rJMSF030M20- CATAGCAGCAACATAGGACAAGGCTAACAGGAACACAGACNGAGACACGAATCTGATCTT
rJMFF022I01- CATAGCAGCAACATAGGACAAGGCTAACAGGAACACAGACAGAGACACGAATCTGATCTT
rJMSF052B22- CATAGCAGCAACATAGGACAAGGCTAACAGGAACACAGACAGAGACACGAATCTGATCTT
                      ____________________________________________________________
consensus CATAGCAGCAACATAGGACAAGGCTAACAGGAACACAGACAGAGACACGAATCTGATCTT
 
. : . : . : . : . : . :
rJMSF030M20- GTCCGTGGCCAAGTCCGGCTTCTTGGGGAACAAGAGTTCATCAATGGTGGCCCTCAGCGA
rJMFF022I01- GTCCGTGGCCAAGTCCGGCTTCTTGGGGAACAAGAGTTCATCAATGGTGGCCCTCAGCGA
rJMSF052B22- GTCCGTGGCCAAGTCCGGCTTCTTGGGGAACAAGAGTTCATCAATGGTGGCCCTCAGCGA
                      ____________________________________________________________
consensus GTCCGTGGCCAAGTCCGGCTTCTTGGGGAACAAGAGTTCATCAATGGTGGCCCTCAGCGA
 
. : . : . : . : . : . :
rJMSF030M20- GTAGTTCAACAATGGGAACACGAGCACCAGGTGCACGGCGTAGCTCAGCCGGACAACATC
rJMFF022I01- GTAGTTCAACAATGGGAACACGAGCACCAGGTGCACGGCGTAGCTCAGCCGGACAACATC
rJMSF052B22- GTAGTTCAACAATGGGAACACGAGCACCAGGTGCACGGCGTAGCTCAGCCGGACAACATC
                      ____________________________________________________________
consensus GTAGTTCAACAATGGGAACACGAGCACCAGGTGCACGGCGTAGCTCAGCCGGACAACATC
 
. : . : . : . : . : . :
rJMSF030M20- ATTCAGCAATGCACTAACCGCGGAACTAGATGAAGACTGATCGAAGTTCACAAGGATATC
rJMFF022I01- ATTCAGCAATGCACTAACCGCGGAACTAGATGAAGACTGATCGAAGTTCACAAGGATATC
rJMSF052B22- ATTCAGCAATGCACTAACCGCGGAACTAGATGAAGACTGATCGAAGTTCACAAGGATATC
                      ____________________________________________________________
consensus ATTCAGCAATGCACTAACCGCGGAACTAGATGAAGACTGATCGAAGTTCACAAGGATATC
 
. : . : . : . : . : . :
rJMSF030M20- AGCATTGATTGATTCCCCGAACAGAANGTATCCGAAAATCCCAATCATGAAATAGAGACC
rJMFF022I01- AGCATTGATTGATTCCCCGAACAGAAGGTATCCGAAAATCCCAATCATGAAATAGAGACC
rJMSF052B22- AGCATTGATTGATTCCCCGAACAGAAGGTATCCGAAAATCCCAATCATGAAATAGAGACC
                      ____________________________________________________________
consensus AGCATTGATTGATTCCCCGAACAGAAGGTATCCGAAAATCCCAATCATGAAATAGAGACC
 
. : . : . : . : . : . :
rJMSF030M20- GGCACAAAGTACTAGTGAAATCTTCACAGCAG
rJMFF022I01- GGCACAAAGTACTAGTGAAATCTTCACAGCAG
rJMSF052B22- GGCACAAAGTACTAGTGAAATCTTCACAGCAGTTGCCATGGTAGAAGGTTTGCCTAACTC
                      ____________________________________________________________
consensus GGCACAAAGTACTAGTGAAATCTTCACAGCAGTTGCCATGGTAGAAGGTTTGCCTAACTC
 
. : . : . : . : . : . :
rJMSF052B22- AATTCCAATAGGATGAACATTGAAGTGAAATGTGAAGGCTGAAACAATTACAGGAACAGC
                      ____________________________________________________________
consensus AATTCCAATAGGATGAACATTGAAGTGAAATGTGAAGGCTGAAACAATTACAGGAACAGC
 
. : . : . : . : . : . :
rJMSF052B22- TGTGAAAAGTTGGATGAAGGAAGAAGCACTGCCATCCAATTCGGGCAGCATTCTCGGGGT
                      ____________________________________________________________
consensus TGTGAAAAGTTGGATGAAGGAAGAAGCACTGCCATCCAATTCGGGCAGCATTCTCGGGGT
 
. : . : . : . : . : . :
rJMSF052B22- CTCGGTTTTACCCTTAACGAGGGCATAGATTGCCATCCCTATGCATATTCCAACAAACAC
JMSF052B22+ GGCATAGATTGCCATCCCTATGCATATTCCAACAAACAC
JMFF043L02+ GGCATAGATTGCCATCCCTATGCATATTCCAACAAACAC
JMSF030M20+ GGCATAGATTGCCATCCCTATGCATATTCCAACAAACAC
                      ____________________________________________________________
consensus CTCGGTTTTACCCTTAACGAGGGCATAGATTGCCATCCCTATGCATATTCCAACAAACAC
 
. : . : . : . : . : . :
rJMSF052B22- AACTGCTAGGAGTACTGCTATGGCTGAACTCCACCATAATGACTCTACAC
JMSF052B22+ AACTGCTAGGAGTACTGCTATGGCTGAACTCCACCATAATGACTCTACACGGCGGTAACA
JMFF043L02+ AACTGCTAGGAGTACTGCTATGGCTGAACTCCACCATAATGACTCTACACGGCGGTAACA
JMFF032M19+ CGGTAACA
JMFF028N16+ A
JMSF030M20+ AACTGCTAGGAGTACTGCTATGGCTGAACTCCACCATAATGACTCTACACGGCGGTAACA
                      ____________________________________________________________
consensus AACTGCTAGGAGTACTGCTATGGCTGAACTCCACCATAATGACTCTACACGGCGGTAACA
 
. : . : . : . : . : . :
JMSF052B22+ AACGAGAGGAAGCATAACAAAGATTACAACCAAAAAGATGGAGAAAGCTCGTGAGTTCCA
JMFF043L02+ AACGAGAGGAAGCATAACAAAGATTACAACCAAAAAGATGGAGAAAGCTCGTGAGTTCCA
JMFF032M19+ AACGAGAGGAAGCATAACAAAGATTACAACCAAAAAGATGGAGAAAGCTCGTGAGTTCCA
JMFF026K03+ GGAAGCATGACGAAGATGACGACCAAAAAGATGGAGAAAGATCGCGAGTTCCA
JMFF028N16+ AACCAGAGGAAGCATGACGAAGATGACGACCAAAAAGATGGAGAAAGATCGCGAGTTCCA
JMSF030M20+ AACGAGAGGAAGCATAACAAAGATTACAACCAAAAAGATGGAGAAAGCTCGTGAGTTCCA
                      ____________________________________________________________
consensus AACGAGAGGAAGCATAACAAAGATTACAACCAAAAAGATGGAGAAAGCTCGTGAGTTCCA
 
. : . : . : . : . : . :
JMSF052B22+ CCAGTGAATGCCAAACCATTCTTGCAAAATGCCCATGTGTTCTGAGCCATTTCCACAGAG
JMFF043L02+ CCAGTGAATGCCAAACCATTCTTGCAAAATGCCCATGTGTTCTGAGCCATTTCCACAGAG
JMFF032M19+ CCAGTGAATGCCAAACCATTCTTGCAAAATGCCCATGTGTTCTGAGCCATTTCCACAGAG
JMFF026K03+ CCAGTGAATGCCAAACCATTCTTGCAAAATGCCCATGTGTTCTGTACCATTTCCACATAG
JMFF028N16+ CCAGTGAATGCCAAACCATTCTTGCAAAATGCCCATGTGTTCTGTACCATTTCCACATAG
JMSF030M20+ CCAGTGAATGCCAAACCATTCTTGCAAAATGCCCATGTGTTCTGAGCCATTTCCACAGAG
                      ____________________________________________________________
consensus CCAGTGAATGCCAAACCATTCTTGCAAAATGCCCATGTGTTCTGAGCCATTTCCACAGAG
 
. : . : . : . : . : . :
JMSF052B22+ AACATCCCCGATGATAATGAGGTACATGATTAAGCAACCGAGATTAGTAATCAGAATACA
JMFF043L02+ AACATCCCCGATGATAATGAGGTACATGATTAAGCAACCGAGATTAGTAATCAGAATACA
JMFF032M19+ AACATCCCCGATGATAATGAGGTACATGATTAAGCAACCGAGATTAGTAATCAGAATACA
JMFF026K03+ AACATCCCCGATGATAATGAGGTACATAATTAAGCAACCAAGATTAGTAATCATAATACA
JMFF028N16+ AACATCCCCGATGATAATGAGGTACATAATTAAGCAACCAAGATTAGTAATCATAATACA
JMSF030M20+ AACATCCCCGATGATAATGAGGTACATGATTAAGCAACCGAGATTAGTAATCAGAATACA
                      ____________________________________________________________
consensus AACATCCCCGATGATAATGAGGTACATGATTAAGCAACCGAGATTAGTAATCAGAATACA
 
. : . : . : . : . : . :
JMSF052B22+ AATTTGCAGAGCCACAGAGCCAATCTTTCCGAAGTTCTCCTTCATCAAACCGGCGTAAGT
JMFF043L02+ AATTTGCAGAGCCACAGAGCCAATCTTTCCGAGGTTCTCCTTCATCAAACCGGCGTAAGT
JMFF032M19+ AATTTGCAGAGCCACAGAGCCAATCTTTCCGAAGTTCTCCTTCATCAAACCGGCGTAAGT
JMFF026K03+ AATTTGCAGAGCCACAGAGCCAATCTTTCCGAAGTTCTCCTTCATCAGACCGGCGTAAGT
JMFF028N16+ AATTTGCAGAGCCACAGAGCCAATCTTTCCGAAGTTCTCCTTCATCAGACCGGCGTAAGT
JMFF022I01+ CCACAGAGCCAATCTTTCCGAAGTTNTCCTTCATCAAACCGGCGTAAGT
JMSF030M20+ AATTTGCAGAGCCACAGAGCCAATCTTTCCGAAGTTCTCCTTCATCAAACCGGCGTAAGT
                      ____________________________________________________________
consensus AATTTGCAGAGCCACAGAGCCAATCTTTCCGAAGTTCTCCTTCATCAAACCGGCGTAAGT
 
. : . : . : . : . : . :
JMSF052B22+ CGACGCGCTGCCGGCGTGCGTGAACCTGAGCAGGAAATCTACGGATACATCCACCAACAC
JMFF043L02+ CGACGCGCTGCCGGCGTGCGTGAACCTGAGCAGTAAATCTACGGATACATCCACCAACAC
JMFF032M19+ CGACGCGCTGCCGGCGTGCGTGAACCTGAGCAGGAAATCTACGGATACATCCACCAACAC
JMFF026K03+ CGACGCGCTGCCGGCGTGCGTGAACCTGAGCAGGAAATCAACGGAAACATCCACCAGCAC
JMFF028N16+ CGACGCGCTGCCGGCGTGCGTGAACCTGAGCAGGAAATCAACGGAAACATCCACCAGCAC
JMFF022I01+ CGACGCGCTGCCGGCGTGCGTGAACCTGAGCAGGAAATNTACGGATACATCCACCAACAC
JMSF030M20+ CGACGCGCTGCCGGCGTGCGTGAACCTGAGCAGGAAATCTACGGATACATCCACCAACAC
                      ____________________________________________________________
consensus CGACGCGCTGCCGGCGTGCGTGAACCTGAGCAGGAAATCTACGGATACATCCACCAACAC
 
. : . : . : . : . : . :
JMSF052B22+ GGCCACGATCACCGTCAAAACGAACGCCGGAATCACGCCGAGTACCTTGAGGGTAGCCGG
JMFF043L02+ GGCCACGATCACCGTCAAAACGAACGCCGGAATCACGCCGAGTACCTTGAGGGTAGCCGG
JMFF032M19+ GGCCACGATCACCGTCAAAACGAACGCCGGAATCACGCCGAGTACCTTGAGGGTAGCCGG
JMFF026K03+ GGCCACGACCACCGTCAAAACGAACGCCGGAATCACGCCGAGCACCTTCAGGGTAGCCGG
JMFF028N16+ GGCCACGACCACCGTCAAAACGAACGCCGGAATCACGCCGAGCACCTTCAGGGTAGCCGG
JMFF022I01+ GGCCACGATCACCGTCAAAACGAACGCCGGAATCACGCCGAGTACCTTGAGGGTAGCCGG
JMSF030M20+ GGCCACGATCACCGTCAAAACGAACGCCGGAATCACGCCGAGTACCTTGAGGGTAGCCGG
                      ____________________________________________________________
consensus GGCCACGATCACCGTCAAAACGAACGCCGGAATCACGCCGAGTACCTTGAGGGTAGCCGG
 
. : . : . : . : . : . :
JMSF052B22+ AATGGACATGATTCCGGCACCGACGATAGTCGTCGACACGTTGAACACCGCCCGGCATAT
JMFF043L02+ AATGGACATGATTCCGGCACCGACGATAGTCGTCGACACGTTGAACACCGCCCGGCATAT
JMFF032M19+ AATGGACATGATTCCGGCACCGACGATAGTCGTCGACACGTTGAACACCGCCCGGCATAT
JMFF026K03+ AACGGACATGATTCCGGCGCCGATGATGCTCGTCGACACGTTAAACACCGCCCGGCATAT
JMFF028N16+ AACGGACATGATTCCGGCGCCGATGATGCTCGTCGACACGTTAAACACCGCCCGGCATAT
JMFF022I01+ AATGGACATGATTCCGGCACCGACGATAGTCGTCGACACGTTGAACACCGCCCGGCATAT
JMSF030M20+ AATGGACATGATTCCGGCACCGACGATAGTCGTCGACACGTTGAACACCGCCCGGCATAT
                      ____________________________________________________________
consensus AATGGACATGATTCCGGCACCGACGATAGTCGTCGACACGTTGAACACCGCCCGGCATAT
 
. : . : . : . : . : . :
JMSF052B22+ CAGTAGCCTTCTCTCCGTCGGCGTGTCTCTCCTCTGGAGCAGAGGGACGTCGGCTCCGAT
JMFF043L02+ CAGTAGCCTTCTCTCCGTCGGCGTGTCTCTCCTCTGGAGCAGAGGGACGTCGGCTCCGAT
JMFF032M19+ CAGTAGCCTTCTCTCCGTCGGCGTGTCTCTCCTCTGGAGCAGAGGGACGTCGGCTCCGAT
JMFF026K03+ CACCAGCCTTCTCTCCGCCGGCGTGTCTCTCCTCTGGAGCAGCGGCGCGTCAGCTCCGAT
JMFF028N16+ CACCAGCCTTCTCTCCGCCGGCGTGTCTCTCCTCTGGAGCAGCGGCGCGTCAGCTCCGAT
JMFF022I01+ CAGTAGCCTTCTCTCCGTCGGCGTGTCTCTCCTCTGGAGCAGAGGGACGTCGGCTCCGAT
JMSF030M20+ CAGTAGCCTTCTCTCCGTCGGCGTGTCTCTCCTCTGGAGCAGAGGGACGTCGGCTCCGAT
                      ____________________________________________________________
consensus CAGTAGCCTTCTCTCCGTCGGCGTGTCTCTCCTCTGGAGCAGAGGGACGTCGGCTCCGAT
 
. : . : . : . : . : . :
JMSF052B22+ CACCGGCGACATCCCGGAGAACGGAGAATATGGCTTCCCACTTTTCCTGGTCTATCT
JMFF043L02+ CACCGGCGACATCCCGGAGAACGGAGAATATGGCTTCC
JMFF032M19+ CACCGGCGACATCCCGGAGAACGGAGAATATGGCTTCCCACTTTTCCTGGTCTATCT
JMFF026K03+ CACCGGCGACATCCCGGAGAGCGGAGAAAATGGCTT
JMFF028N16+ CACCGGCGACATCCCGGAGAGCGGAGAAAATGGCTT
JMFF022I01+ CACCGGCGACATCCCGGAGAACGGAGAATATGGCTTCCCACTTTTCCTGGTCTATCT
JMSF030M20+ CACCGGCGACATCCCGGAGAACGGAGAATATGGCTTCCCACTTTTCCTGGTCTATCTTCG
                      ____________________________________________________________
consensus CACCGGCGACATCCCGGAGAACGGAGAATATGGCTTCCCACTTTTCCTGGTCTATCTTCG