Contig 000816:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046A11Sequence596000816 (2)ref|XP_009766211.1|6e-82PREDICTED: serine/threonine-protein phosphatase 5 isoform X2 [Nicotiana sylvest393012445 (2)ref|XP_006852678.1|2e-04hypothetical protein AMTR_s00021p00250570 [Amborella trichopoda] gb|ERN14145.1|
JMSF030L05Sequence636000816 (2)ref|XP_011082952.1|4e-88PREDICTED: serine/threonine-protein phosphatase 5-like [Sesamum indicum]771012445 (2)gb|AEM45799.1|2e-109serine/threonine protein phosphatase 5 [Solanum torvum]

Alignment

This contig is upended


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JMSF030L05+                                   GAATGATAGTCAATGGAGTCGGCAACTGAGTGCTTT
                      ____________________________________________________________
consensus                                     GAATGATAGTCAATGGAGTCGGCAACTGAGTGCTTT
 
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JMFF046A11+            CAGATTCAGGGACAGAAATAGCTTCTTCAAACTTGAGTTTCATCACTGCCTTCTCACAT
JMSF030L05+           CCAGATTCAGGGACAGAAATAGCTTCTTCAAACTTGAGTTTCATCACTGCCTTCTCACAT
                      ____________________________________________________________
consensus             CCAGATTCAGGGACAGAAATAGCTTCTTCAAACTTGAGTTTCATCACTGCCTTCTCACAT
 
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JMFF046A11+           TCCCTCAATTTCTTTGTAGCGTCGGGGTCATTTGGACATATCTTCTTGACCTGCTGAAAA
JMSF030L05+           TCCCTCAATTTCTTTGTAGCGTCGGGGTCATTTGGACATATCTTCTTGACCTGCTGAAAA
                      ____________________________________________________________
consensus             TCCCTCAATTTCTTTGTAGCGTCGGGGTCATTTGGACATATCTTCTTGACCTGCTGAAAA
 
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JMFF046A11+           TCTTTGAGTGCATCTTTAAACTTCCCCATTGCCAAATATGCAGCCCCTCGTCTATAATAA
JMSF030L05+           TCTTTGAGTGCATCTTTAAACTTCCCCATTGCCAAATATGCAGCCCCTCGTCTATAATAA
                      ____________________________________________________________
consensus             TCTTTGAGTGCATCTTTAAACTTCCCCATTGCCAAATATGCAGCCCCTCGTCTATAATAA
 
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JMFF046A11+           CCCTTGGAATATCTAGGGTCAATCTCAATAGCCTTAGTAGCATCCTGTATAGCGCTCCCA
JMSF030L05+           CCCTTGGAATATCTAGGGTCAATCTCAATAGCCTTAGTAGCATCCTGTATAGCGCTCCCA
                      ____________________________________________________________
consensus             CCCTTGGAATATCTAGGGTCAATCTCAATAGCCTTAGTAGCATCCTGTATAGCGCTCCCA
 
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JMFF046A11+           TACTCCTCCAATTTGGTATGCGCGAAGGCACGGTTAGCCCAGTAAACCGCATTCTCGCAG
JMSF030L05+           TACTCCTCCAATTTGGTATGCGCGAAGGCACGGTTAGCCCAGTAAACCGCATTCTCGCAG
                      ____________________________________________________________
consensus             TACTCCTCCAATTTGGTATGCGCGAAGGCACGGTTAGCCCAGTAAACCGCATTCTCGCAG
 
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JMFF046A11+           TTCAACTCTATCGCTCGCGTATACAGATCAATAGCTTGCGAATACTTATGCGCTTTGAAA
JMSF030L05+           TTCAACTCTATCGCTCGCGTATACAGATCAATAGCTTGCGAATACTTATGCGCTTTGAAA
                      ____________________________________________________________
consensus             TTCAACTCTATCGCTCGCGTATACAGATCAATAGCTTGCGAATACTTATGCGCTTTGAAA
 
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JMFF046A11+           GCTTCATTGGCTTGGAGTTTAAACTGTTCAGC                            
JMSF030L05+           GCTTCATTGGCTTGGAGTTTAAACTGTTCAGCCGGATTAGAGTTGGAATTTTCCGGCTCC
                      ____________________________________________________________
consensus             GCTTCATTGGCTTGGAGTTTAAACTGTTCAGCCGGATTAGAGTTGGAATTTTCCGGCTCC
 
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JMSF030L05+           ATTGCGGGCATAATAATACGAGTAGTAATAAGAGGTTAGCGTTGTTTGGTTACGAGAAGA
                      ____________________________________________________________
consensus             ATTGCGGGCATAATAATACGAGTAGTAATAAGAGGTTAGCGTTGTTTGGTTACGAGAAGA
 
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JMSF030L05+           TGACAGAGCTCATCAATCTTTAGTAGCAGCAGCAGTTCGGTTTTGTGAAATGGTCGGAGG
                      ____________________________________________________________
consensus             TGACAGAGCTCATCAATCTTTAGTAGCAGCAGCAGTTCGGTTTTGTGAAATGGTCGGAGG
 
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JMSF030L05+           GAGGAGGAGAGAAAGACGAGTGAGTGATTAGCCCTAGTCCCCGCATGTATACAAGTCGTC
                      ____________________________________________________________
consensus             GAGGAGGAGAGAAAGACGAGTGAGTGATTAGCCCTAGTCCCCGCATGTATACAAGTCGTC