Contig 000815:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017M07Sequence343000815 (10)
JMFF026C05Sequence491000815 (10)gb|AIT97255.1|5e-12glycine-rich RNA-binding protein 1-3 [Capsicum annuum] gb|AIT97258.1| glycine-ri782000815 (10)gb|EPS70351.1|8e-21hypothetical protein M569_04412, partial [Genlisea aurea]
JMFN003D19Sequence574000815 (10)gb|EPS70351.1|4e-21hypothetical protein M569_04412, partial [Genlisea aurea]
JMFN019M06Sequence625000815 (10)gb|ABA81883.1|2e-22putative glycine-rich RNA binding protein-like [Solanum tuberosum]
JMFS111B02Sequence627000815 (10)gb|ABA81883.1|4e-22putative glycine-rich RNA binding protein-like [Solanum tuberosum]
JMSF030J03Sequence616000815 (10)gb|ABA81883.1|5e-21putative glycine-rich RNA binding protein-like [Solanum tuberosum]770000815 (10)gb|ABA81883.1|2e-21putative glycine-rich RNA binding protein-like [Solanum tuberosum]
JMSF035E17Sequence402000815 (10)739009573 (15)gb|ADK73610.1|4e-114small GTP binding protein [Ipomoea batatas]
JMSF043N22Sequence431000815 (10)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN003D19+ GAAAATGCAAATCAACGTT
                      ____________________________________________________________
consensus GAAAATGCAAATCAACGTT
 
. : . : . : . : . : . :
JMFN003D19+ TACATCATTTCTCGAGAACTTTGTAAATACAGATTTACAAACAAATCGAACCACAGATAA
JMSF043N22+ GAACTTTGTAAATACAGATTTACAAACAAATCGAACCACAGATAA
JMSF035E17+ GAACTTTGTAAATACAGATTTACAAACAAATCGAACCACAGATAA
rJMFF017M07- AATACAGATTTACAAACAANTCGAACCACAGATAA
rJMFF026C05- TCATTCCTCGAGAACTTTGTAAATACAGATTTACAAACAAATCGAACCACAGATAA
rJMSF030J03- GATTTACAAACAAATCGAACCACAGATAA
                      ____________________________________________________________
consensus TACATCATTTCTCGAGAACTTTGTAAATACAGATTTACAAACAAATCGAACCACAGATAA
 
. : . : . : . : . : . :
JMFN003D19+ CCGAAACGGATAACCAGAACACGCAGACTTAAAGTAACACCAAACACCATAGCAGAAGGA
JMSF043N22+ CCGAAACGGATAACCAGAACACGCAGACTTAAAGTAACACCAAACACCATAGCAGAAGGA
JMSF035E17+ CCGAAACGGATAACCAGAACACGCAGACTTAAAGTAACACCAAACACCATAGCAGAAGGA
rJMFF017M07- CCGAAACGGATAACCAGAACACGCAGACTTAAAGTAACACCAAACACCATAGCAGAAGGA
rJMFF026C05- CCGAAACGGATAACCAGAACACGCAGACTTAAAGTAACACCAAACACCATAGCAGAAGGA
rJMSF030J03- CCGAAACGGATAACCAGAACACGCAGACTTAAAGTAACACCAAACACCATAGCAGAAGGA
                      ____________________________________________________________
consensus CCGAAACGGATAACCAGAACACGCAGACTTAAAGTAACACCAAACACCATAGCAGAAGGA
 
. : . : . : . : . : . :
JMFN003D19+ CCCTAACAAGATCTAATATCTAACAGATCCAGGGACAAAACATTAACCACGCAACAATAA
JMSF043N22+ CCCTAACAAGATCTAATATCTAACAGATCCAGGGACAAAACATTAACCACGCAACAATAA
JMSF035E17+ CCCTAACAAGATCTAATATCTAACAGATCCAGGGACAAAACATTAACCACGCAACAATAA
rJMFF017M07- CCCTAACAAGATCTAATATCTAACAGATCCAGGGACAAAACATTAACCACGCAACANTAA
rJMFF026C05- CCCTAACAAGATCTAATATCTAACAGATCCAGGGACAAAACATTAACCACGCAACAATAA
rJMSF030J03- CCCTAACAAGATCTAATATCTAACAGATCCAGGGACAAAACATTAACCACGCAACAATAA
                      ____________________________________________________________
consensus CCCTAACAAGATCTAATATCTAACAGATCCAGGGACAAAACATTAACCACGCAACAATAA
 
. : . : . : . : . : . :
JMFN003D19+ AGCTAGATTAGTTCCTCCAGCTTCCATCATCGCCTCCCCTAGAGTAGCGGTCACCTCCGC
JMSF043N22+ AGCTAGATTAGTTCCTCCAGCTTCCATCATCGCCTCCCCTAGAGTAGCGGTCACCTCCGC
JMSF035E17+ AGCTAGATTAGTTCCTCCAGCTTCCATCATCGCCTCCCCTAGAGTAGCGGTCACCTCCGC
rJMFF017M07- AGCTAGATTAGTTCCTCCAGCTTCCATCATCGCCTCCCCTAGAGTAGCGGTCACCTCCGC
rJMFF026C05- AGCTAGATTAGTTCCTCCAGCTTCCATCATCGCCTCCCCTAGAGTAGCGGTCACCTCCGC
rJMSF030J03- AGCTAGATTAGTTCCTCCAGCTTCCATTATCGCCTCCCCTAGAGTAGCGGTCACCTCCGC
                      ____________________________________________________________
consensus AGCTAGATTAGTTCCTCCAGCTTCCATCATCGCCTCCCCTAGAGTAGCGGTCACCTCCGC
 
. : . : . : . : . : . :
JMFN003D19+ CGTAGCCACCGCCTCCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCGCCAC
JMSF043N22+ CGTAGCCACCGCCTCCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCGCCAC
JMSF035E17+ CGTAGCCACCGCCTCCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCGCCAC
rJMFF017M07- CGTAGCCACCGCCTCCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCGCCAC
rJMFF026C05- CGTAGCCACCGCCTCCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCGCCAC
rJMSF030J03- CGTAGCCACCGCCTCCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCGCCAC
                      ____________________________________________________________
consensus CGTAGCCACCGCCTCCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCGCCAC
 
. : . : . : . : . : . :
JMFN003D19+ CACCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCTCCACCCTCACGACGTC
JMSF043N22+ CACCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCTCCACCCTCACGACGTC
JMSF035E17+ CACCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCC
rJMFF017M07- CACCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCTCCACC
rJMFF026C05- CACCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCTCCACCCTCACGACGTC
rJMSF030J03- CACCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCTCCACCCTCACGACGTC
                      ____________________________________________________________
consensus CACCATAACCACCTTCCCTGCGGCCACCATAGCCGCCACCGCCTCCACCCTCACGACGTC
 
. : . : . : . : . : . :
JMFN003D19+ CACCACGGAAACCGCCACCGCCGCCGCCGCCGCCGCTTCCGCGAGACTGAGCCTCGTTAA
JMSF043N22+ CACCACGGAAACCGCCACCGCCGCCGCCGCCGCCGCTTCCGCGAGACTGAGCCTCGTTAA
rJMFF026C05- CACCACGGAAACCGCCACCGCCGCCGCCGCCGCCGCTTCCGCGAGACTGAGCCTCGTTAA
rJMSF030J03- CACCACGGAAACCGCCACCGCCGCCGCCGCCGCCGCTTCCGCGAGACTGAGCCTCGTTAA
JMFN019M06+ CCACGGAAACCGCCACCGCCGCCGCCGCCGCCGGTTCCGCGAGACTGAGCCTCGTTAA
JMFS111B02+ CCGCCGCCGCCGCGCCGGTTTCCGCGAGACTGAGCCTCGTTAA
JMSF030J03+ TGAGCCTCGTTAA
                      ____________________________________________________________
consensus CACCACGGAAACCGCCACCGCCGCCGCCGCCGCCGCTTCCGCGAGACTGAGCCTCGTTAA
 
. : . : . : . : . : . :
JMFN003D19+ CAGTTATGTTACGCCCGTCAAGAGACTGGCCGTTCATCCCCTCAATAGCATCCTTCATTG
JMSF043N22+ CAGTTATGTTACGCCCGTCAAGAGAC
rJMFF026C05- CAGTTATGTTACGCCCGTCAAGAGACTGGCCGTTCATCCCCTCAATAGCATCCTTCATTG
rJMSF030J03- CAGTTATGTTACGCCCGTCAAGAGACTGGCCGTTCATCCCCTCAATAGCATCCTTCATTG
JMFN019M06+ CAGTTATGTTACGCCCGTCAAGAGACTGGCCGTTCATCCCCTCAATAGCATCCTTCATTG
JMFS111B02+ CAGTTATGTTACGCCCGTCAAGAGACTGGCCGTTCATCCCCTCAATAGCATCCTTCATTG
JMSF030J03+ CAGTTATGTTACGCCCGTCAAGAGACTGGCCGTTCATCCCCTCAATAGCATCCTTCATTG
                      ____________________________________________________________
consensus CAGTTATGTTACGCCCGTCAAGAGACTGGCCGTTCATCCCCTCAATAGCATCCTTCATTG
 
. : . : . : . : . : . :
JMFN003D19+ CTTGCTCATCCTTGAATGTAACGAAGCCAAAACCTCTGGATCTACCGGTCTCACGATCGT
rJMFF026C05- CTTGCTCATCCTTGAATGTAACGAAGCCAAAACCTCTGGATCTACCGGTCTCACGATCGT
rJMSF030J03- CTTGCTCATCCTTGAATGTAACGAAGCCAAAACCTCTGGATCTACCGGTCTCACGATCGT
JMFN019M06+ CTTGCTCATCCTTGAATGTAACGAAGCCAAAACCTCTGGATCTACCGGTCTCACGATCGT
JMFS111B02+ CTTGCTCATCCTTGAATGTAACGAAGCCAAAACCTCTGGATCTACCGGTCTCACGATCGT
JMFF026C05+ CCGGTCTCACGATCGT
JMSF030J03+ CTTGCTCATCCTTGAATGTAACGAAGCCAAAACCTCTGGATCTACCGGTCTCACGATCGT
                      ____________________________________________________________
consensus CTTGCTCATCCTTGAATGTAACGAAGCCAAAACCTCTGGATCTACCGGTCTCACGATCGT
 
. : . : . : . : . : . :
JMFN003D19+ TGATGATCTGATCCA
rJMFF026C05- TGATGATCTGATCCACAACAAAATTCAACAACAGTCAGAATC-ACCAAATCTACNAGCTA
rJMSF030J03- TGATGATCTGATCCACAACAAAATTCAACAACAGTCAGAATCAACCAAATCTACAAGCTA
JMFN019M06+ TGATGATCTGATCCACAACAAAATTCAACAACAGTCAGAATCAACCAAATCTACAAGCTA
JMFS111B02+ TGATGATCTGATCCACAACAAAATTCAACAACAGTCAGAATCAACCAAATCTACAAGCTA
JMFF026C05+ TGATGATCTGATCCACAACAAAATTCAACAACAGTCAGAATC-ACCAAATCTACAAGCTA
JMSF030J03+ TGATGATCTGATCCACAACAAAATTCAACAACAGTCAGAATCAACCAAATCTACAAGCTA
                      ____________________________________________________________
consensus TGATGATCTGATCCACAACAAAATTCAACAACAGTCAGAATCAACCAAATCTACAAGCTA
 
. : . : . : . : . : . :
rJMFF026C05- AAA--ACAATAATAATAGCAACAAACTTAAATACATATATACGTATAGGGGCGAAACACA
rJMSF030J03- AAAACACAATAATAATAGCAACAAACTCAAATACATATATACGTATAGGGGCGAAACACA
JMFN019M06+ AAAACACAATAATAATAGCAACAAACTCAAATACATATATACGTATAGGGGCGAAACACA
JMFS111B02+ AAAACACAATAATAATAGCAACAAACTCAAATACATATATACGTATAGGGGCGAAACACA
JMFF026C05+ AAA--ACAATAATAATAGCAACAAACTTAAATACATATATACGTATAGGGGCGAAACACA
JMSF030J03+ AAAACACAATAATAATAGCAACAAACTCAAATACATATATACGTATAGGGGCGAAACACA
                      ____________________________________________________________
consensus AAAACACAATAATAATAGCAACAAACTCAAATACATATATACGTATAGGGGCGAAACACA
 
. : . : . : . : . : . :
rJMFF026C05- AAAGCGATCGATCTTAACCTCTCAACAGAAAGAGGAAGATGAACGTACCGTTTCAGGGGA
rJMSF030J03- AAAGCGATCGATCTTAACCTCTCAACAGAAAGAGGAAGATGAACGTACCGTTTCAGGGGA
JMFN019M06+ AAAGCGATCGATCTTAACCTCTCAACAGAAAGAGGAAGATGAACGTACCGTTTCAGGGGA
JMFS111B02+ AAAGCGATCGATCTTAACCTCTCAACAGAAAGAGGAAGATGAACGTACCGTTTCAGGGGA
JMFF026C05+ AAAGCGATCGATCTTAACCTCTCAACAGAAAGAGGAAGATGAACGTACCGTTTCAGGGGA
JMSF030J03+ AAAGCGATCGATCTTAACCTCTCAACAGAAAGAGGAAGATGAACGTACCGTTTCAGGGGA
                      ____________________________________________________________
consensus AAAGCGATCGATCTTAACCTCTCAACAGAAAGAGGAAGATGAACGTACCGTTTCAGGGGA
 
. : . : . : . : . : . :
rJMFF026C05- AAGTAATAGTAACCAATAGTAACACNGAGAGAGAGAACAGTAGATCAAAGTAACATAGTA
rJMSF030J03- AAGTAATAGTAACAAATAGTAACACAGAGAGAGAGAACAGTAGATCAAAGTAACATAGTA
JMFN019M06+ AAGTAATAGTAACAAATAGTAACACAGAGAGAGAGAACAGTAGATCAAAGTAACATAGTA
JMFS111B02+ AAGTAATAGTAACAAATAGTAACACAGAGAGAGAGAACAGTAGATCAAAGTAACATAGTA
JMFF026C05+ AAGTAATAGTAACAAATAGTAACACAGAGAGAGAGAACAGTAGATCAAAGTAACATAGTA
JMSF030J03+ AAGTAATAGTAACAAATAGTAACACAGAGAGAGAGAACAGTAGATCAAAGTAACATAGTA
                      ____________________________________________________________
consensus AAGTAATAGTAACAAATAGTAACACAGAGAGAGAGAACAGTAGATCAAAGTAACATAGTA
 
. : . : . : . : . : . :
rJMFF026C05- GTAGTAACA
rJMSF030J03- GTAGTAACAGAGAGATCATGT
JMFN019M06+ GTAGTAACAGAGAGATCATGTCAACAAAGACGAATCGGGTGAAACCGAGATTCGATCACT
JMFS111B02+ GTAGTAACAGAGAGATCATGTCAACAAAGACGAATCGGGTGAAACCGAGATTCGATCACT
JMFF026C05+ GTAGTAACAGAGAGATCATGTCAACAAAGACGAATCGGGTGAAACCGAGATTCGATCACT
JMSF030J03+ GTAGTAACAGAGAGATCATGTCAACAAAGACGAATCGGGTGAAACCGAGATTCGATCACT
                      ____________________________________________________________
consensus GTAGTAACAGAGAGATCATGTCAACAAAGACGAATCGGGTGAAACCGAGATTCGATCACT
 
. : . : . : . : . : . :
JMFN019M06+ GCTCTGAGACAGACAGACCTTCGATTCGATGACCTCGCCGAAGGAAGAGAACGCATCATG
JMFS111B02+ GCTCTGAGACAGACAGACCTTCGATTCGATGACCTCGCCGAAGGAAGAGAACGCATCATG
JMFF026C05+ GCTCTGAGACAGACAGACCTTCGATTCGATGACCTCGCCGAAGGAAGAGAACGCATCATG
JMSF030J03+ GCTCTGAGACAGACAGACCTTCGATTCGATGACCTCGCCGAAGGAAGAGAACGCATCATG
                      ____________________________________________________________
consensus GCTCTGAGACAGACAGACCTTCGATTCGATGACCTCGCCGAAGGAAGAGAACGCATCATG
 
. : . : . : . : . : . :
JMFN019M06+ TAGAGAACTTTCAGTGGTGGCCCAGGCCAAACCACCAACGAAGCATCTGAACTCAACTTC
JMFS111B02+ TAGAGAACTTTCAGTGGTGGCCCAGGCCAAACCACCAACGAAGCATCTGAACTCAACTTC
JMFF026C05+ TAGAGAACTTTCAGTGGTGGCCCAGGCCAAACCACCAACGAAGCATCTGAACTCAACTTC
JMSF030J03+ TAGAGAACTTTCAGTGGTGGCCCAGGCCAAACCACCAACGAAGCATCTGAACTCAACTTC
                      ____________________________________________________________
consensus TAGAGAACTTTCAGTGGTGGCCCAGGCCAAACCACCAACGAAGCATCTGAACTCAACTTC
 
. : . : . : . : . : . :
JMFN019M06+ TGCCATGACTGAAAGGAGAAAATACAA
JMFS111B02+ TGCCATGACTGAAAGGAGAAAATACAAGCAGAAGCTAAAGACTA
JMFF026C05+ TGCCATGACTGAAAGGAGAAAATACAAGCAGAAGCTAAAGACTAGAAGAGAAGACG
JMSF030J03+ TGCCATGACTGAAAGGAGAAAATACAAGCAGAAGCTAAAGACTAGAAGAGAAGACGATCA
                      ____________________________________________________________
consensus TGCCATGACTGAAAGGAGAAAATACAAGCAGAAGCTAAAGACTAGAAGAGAAGACGATCA