Contig 000814:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016O02Sequence340000814 (3)ref|XP_011079723.1|2e-17PREDICTED: spermatogenesis-associated protein 20 [Sesamum indicum]740004238 (2)ref|XP_009775753.1|2e-106PREDICTED: spermatogenesis-associated protein 20 isoform X2 [Nicotiana sylvestr
JMSF024I01Sequence645000814 (3)ref|XP_009775752.1|4e-83PREDICTED: spermatogenesis-associated protein 20 isoform X1 [Nicotiana sylvestr719004238 (2)ref|XP_009775753.1|5e-83PREDICTED: spermatogenesis-associated protein 20 isoform X2 [Nicotiana sylvestr
JMSF030H07Sequence196000814 (3)

Alignment

This contig is upended


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JMSF024I01+                                                      CATCAAAGGCTTTCAAG
                      ____________________________________________________________
consensus                                                        CATCAAAGGCTTTCAAG
 
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JMSF024I01+           TCAGGTGAAAGGAAGACACTCAGTGGCCAGCCACCACCACCATATAAAGCCGACACATAT
                      ____________________________________________________________
consensus             TCAGGTGAAAGGAAGACACTCAGTGGCCAGCCACCACCACCATATAAAGCCGACACATAT
 
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JMSF024I01+           GTCATGTAAACCTTGTCCACATCAGGACGTTCTTCACGATCCACCTTGATACTAACGAAC
                      ____________________________________________________________
consensus             GTCATGTAAACCTTGTCCACATCAGGACGTTCTTCACGATCCACCTTGATACTAACGAAC
 
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JMSF024I01+           CAATCATTCAGCAAACGTGCAACTTCTTCATTCTCGAAAGATTCAACTTCCATCACATGG
                      ____________________________________________________________
consensus             CAATCATTCAGCAAACGTGCAACTTCTTCATTCTCGAAAGATTCAACTTCCATCACATGG
 
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JMSF016O02+                                                                  GAGCA
JMSF024I01+           CACCAATGACAAGTGCTGTACCCAATCGATAAAAAGATTGGCACATCTCTTTTGCGAGCA
                      ____________________________________________________________
consensus             CACCAATGACAAGTGCTGTACCCAATCGATAAAAAGATTGGCACATCTCTTTTGCGAGCA
 
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JMSF016O02+           TCAGCAAAAGCCTCCTCACCCCATGGATACCAATCCACCGGGTTATGAGCGTGCTGGAGT
JMSF024I01+           TCAGCAAAAGCCTCCTCACCCCATGGATACCAATCCACCGGGTTATGAGCGTGCTGGAGT
                      ____________________________________________________________
consensus             TCAGCAAAAGCCTCCTCACCCCATGGATACCAATCCACCGGGTTATGAGCGTGCTGGAGT
 
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JMSF016O02+           AGATAAGGACTGTGCTCCGAGGCAAGACGATTGGTATGCTTATGCTTCTTCGT-CGCTGC
JMSF024I01+           AGATAAGGACTGTGCTCCGAGGCAAGACGATTGGTATGCTTATGCTTCTTCGTCCGCTGC
                      ____________________________________________________________
consensus             AGATAAGGACTGTGCTCCGAGGCAAGACGATTGGTATGCTTATGCTTCTTCGTCCGCTGC
 
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JMSF016O02+           GAAGACTGCTCTGCCATAGCTAAAACTCTCACCGAGTGTATGGGTCTTCGAAGACAACGA
JMSF024I01+           GAAGACTGCTCTGCCATAGCTAAAACTCTCACCGAGTGTATGGGTCTTCGAAGACAACGA
                      ____________________________________________________________
consensus             GAAGACTGCTCTGCCATAGCTAAAACTCTCACCGAGTGTATGGGTCTTCGAAGACAACGA
 
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JMSF016O02+           TGTTGGAAAAAAACACCCAAAAACGAAGAACTGTTCTTCTTGGTTGAGTGGGTAGTAGAT
JMSF024I01+           TGTTGGAAAAAAACACCCAAAAACGAAGAACTGTTCTTCTTGGTTGAGTGGGTAGTAGAT
JMSF030H07+                                                       TGAGTNGGTANTAGAT
                      ____________________________________________________________
consensus             TGTTGGAAAAAAACACCCAAAAACGAAGAACTGTTCTTCTTGGTTGAGTGGGTAGTAGAT
 
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JMSF016O02+           GAATAATAGCAGTGTGTTGTTAGTGAGTTGAGAGCATGTAAGAAGCGGTGGCGAGTTGAG
JMSF024I01+           GAATAATAGCAGTGTGTTGTTAGTGAGTTGAGAGCATGTAAGAAGCGGTGGCGAGTTGAG
JMSF030H07+           GNATAATAGCAGTGTGTTGTTAGTGAGTTGAGAGCATGTAAGAAGCGGTGGCGANTTGAG
                      ____________________________________________________________
consensus             GAATAATAGCAGTGTGTTGTTAGTGAGTTGAGAGCATGTAAGAAGCGGTGGCGAGTTGAG
 
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JMSF016O02+           GAACACAAAAGCAGTGTTCTGAGCATAGAAATG                           
JMSF024I01+           GAACACAAAAGCAGTGTTCTGAGCATAGAAATGTCGAGAGAAAAAGAGATTTGGGAGTTT
JMSF030H07+           GAACACAAAAGCAGTGTTNTGNGCATAGAAATGTCGAGAGAAAAAGNGATTTGGGAGTTT
                      ____________________________________________________________
consensus             GAACACAAAAGCAGTGTTCTGAGCATAGAAATGTCGAGAGAAAAAGAGATTTGGGAGTTT
 
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JMSF024I01+           ATTATAAGGGAGATGTGGGGTTGGAGC                                 
JMSF030H07+           ATTATAAGGGAGATGTGGGGNTGGAGCGAGAGAAGGTNGGAGAAGAGCAGGTAATTTCCC
                      ____________________________________________________________
consensus             ATTATAAGGGAGATGTGGGGTTGGAGCGAGAGAAGGTNGGAGAAGAGCAGGTAATTTCCC