Contig 000806:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF022G22+                                 AATCCATAGACTCAACACATGTAGTTTGCAACATAATA
                      ____________________________________________________________
consensus                                   AATCCATAGACTCAACACATGTAGTTTGCAACATAATA
 
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JMSF022G22+           GTCATACTATAANCAAAATAAACAAATTAAATGTAATAGAATTACTCACGGCTTCATCTT
                      ____________________________________________________________
consensus             GTCATACTATAANCAAAATAAACAAATTAAATGTAATAGAATTACTCACGGCTTCATCTT
 
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JMSF022G22+           GAAGAATAATTGGTCTGTATTTATTACCCGGCGTGGTTTTGGATTCTTGGGCATCCAATT
                      ____________________________________________________________
consensus             GAAGAATAATTGGTCTGTATTTATTACCCGGCGTGGTTTTGGATTCTTGGGCATCCAATT
 
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JMSF022G22+           TGTTTACAACACATACCTTACAAGACCAATCTTGTTCTCCAGGAGATACATCAGATATCA
JMSF029H03+                                              TCTCCAGGAGATACATCAGATATCA
                      ____________________________________________________________
consensus             TGTTTACAACACATACCTTACAAGACCAATCTTGTTCTCCAGGAGATACATCAGATATCA
 
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JMSF022G22+           ACAATCTTCTCACCATTCTTATAAGCTTTTCTTTAAAGCAAATAGTTTTTTCGAAACCTC
JMSF040J11+               TCTTCTCACCATTCTTATAAGCTTTTCTTTAAAGCAAATAGTTTTTTCGAAACCTC
JMSF029H03+           ACAATCTTCTCACCATTCTTATAAGCTTTTCTTTAAAGCAAATAGTTTTTTCGAAACCTC
                      ____________________________________________________________
consensus             ACAATCTTCTCACCATTCTTATAAGCTTTTCTTTAAAGCAAATAGTTTTTTCGAAACCTC
 
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JMSF022G22+           TATCCGAACTGGAGAAACCGAAACCAATTTCCTGGCATGCAAGCTAAACACACCAATTTC
JMSF040J11+           TATCCGAACTGGAGAAACCGAAACCAATTTCCTGGCATGCAAGCTAAACACACCAATTTC
JMSF029H03+           TATCCGAACTGGAGAAACCGAAACCAATTTCCTGGCATGCAAGCTAAACACACCAATTTC
                      ____________________________________________________________
consensus             TATCCGAACTGGAGAAACCGAAACCAATTTCCTGGCATGCAAGCTAAACACACCAATTTC
 
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JMSF022G22+           GTAGTTTTGAGA-----------------AGCAATCAGAAATTATGCAACTGAAAACACT
JMSF040J11+           GTAGTTTTGAGAAGTTTGGCAGAACTCACAGCAATCAGAAATTATGCAACTGAAAACACT
JMSF029H03+           GTAGTTTTGAGAAGTTTGGCAGAACTCACAGCAATCAGAAATTATGCAACTGAAAACACT
                      ____________________________________________________________
consensus             GTAGTTTTGAGAAGTTTGGCAGAACTCACAGCAATCAGAAATTATGCAACTGAAAACACT
 
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JMSF022G22+           CCTTTGCATATATTGGTGTGATAGAGACTTTTGAGGAGGGTAATTAAACAGACCATTGTA
JMSF040J11+           CCTTTGCATATATTGGTGTGATAGAGACTTTTGAGGAGGGTAATTAAACAGACCATTGTA
JMSF029H03+           CCTTTGCATATATTGGTGTGATAGAGACTTTTGAGGAGGGTAATTAAACAGACCATTGTA
                      ____________________________________________________________
consensus             CCTTTGCATATATTGGTGTGATAGAGACTTTTGAGGAGGGTAATTAAACAGACCATTGTA
 
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JMSF022G22+           TAATTCACTCATCTCTGTACCTACCGTTGAAATGTCTAGAGGATAATGTAATTGAGAAGG
JMSF040J11+           TAATTCACTCATCTCTGTACCTACCGTTGAAATGTCTAGAGGATAATGTAATTGAGAAGG
JMSF029H03+           TAATTCACTCATCTCTGTACCTACCGTTGAAATGTCTAGAGGATAATGTAATTGAGAAGG
                      ____________________________________________________________
consensus             TAATTCACTCATCTCTGTACCTACCGTTGAAATGTCTAGAGGATAATGTAATTGAGAAGG
 
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JMSF022G22+           AAACATCTGAAAAATTTTTAATTTCCGTACACATTGATAGCAAGCCTGTAGTAATCTCTC
JMSF040J11+           AAACATCTGAAAAATTTTTAATTTCCGTACACATTGATAGCAAGCCTGTAGTAATCTCTC
JMSF029H03+           AAACATCTGAAAAATTTTTAATTTCCGTACACATTGATAGCAAGCCTGTAGTAATCTCTC
                      ____________________________________________________________
consensus             AAACATCTGAAAAATTTTTAATTTCCGTACACATTGATAGCAAGCCTGTAGTAATCTCTC
 
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JMSF022G22+           TTTCCTTTTGCTTATTTCCATCTATACCTGGTTGGTTTAACTAAGGAATGAAGATGATGG
JMSF040J11+           TTTCCTTTTGCTTATTTCCATCTATACCTGGTTGGTTTAACTAAGGAATGAAGATGATGG
JMSF029H03+           TTTCCTTTTGCTTATTTCCATCTATACCTGGTTGGTTTAACTAAGGAATGAAGATGATGG
                      ____________________________________________________________
consensus             TTTCCTTTTGCTTATTTCCATCTATACCTGGTTGGTTTAACTAAGGAATGAAGATGATGG
 
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JMSF022G22+           AAAAACACAGAGTAGAGAAGAAAGAGAGAGGCACATGGGTAGAGAAGAAAAAAAGAAATG
JMSF040J11+           AAAAACACAGAGTAGAGAAGAAAGAGAGAGGCACATGGGTAGAGAAGAAAAAAAGAAATG
JMSF029H03+           AAAAACACAGAGTAGAGAAGAAAGAGAGAGGCACATGGGTAGAGAAGAAAAAAAGAAATG
                      ____________________________________________________________
consensus             AAAAACACAGAGTAGAGAAGAAAGAGAGAGGCACATGGGTAGAGAAGAAAAAAAGAAATG
 
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JMSF022G22+           GGTTGA                                                      
JMSF040J11+           GGTTGATGAAATTGCTATGAAGAAACTAAGTTAGAGAAGAAAGAGAGAAATTAGTTTTAG
JMSF029H03+           GGTTGATGAAATTGCTATGAAGAAACTAAGTTAGAGAAGAAAGAGAGAAATTAGTTTTAG
                      ____________________________________________________________
consensus             GGTTGATGAAATTGCTATGAAGAAACTAAGTTAGAGAAGAAAGAGAGAAATTAGTTTTAG
 
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JMSF040J11+           TTGACGGAATTGCTTGGAAGAAACCAGAAAGCCAGCTTAGGAAAACGTGCACCACCACTC
JMSF029H03+           TTGACGGAATTGCTTGGAAGAAACCAGAAAGCCAGCTTAGGAAAACGTGCACCACCACTC
                      ____________________________________________________________
consensus             TTGACGGAATTGCTTGGAAGAAACCAGAAAGCCAGCTTAGGAAAACGTGCACCACCACTC