Contig 000805:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009D08Sequence607000805 (5)ref|XP_009626056.1|5e-31PREDICTED: 14 kDa proline-rich protein DC2.15-like [Nicotiana tomentosiformis]
JMSF002M16Sequence252000805 (5)
JMSF013F13Sequence562000805 (5)gb|KJB39719.1|3e-31hypothetical protein B456_007G027100 [Gossypium raimondii]
JMSF022E13Sequence524000805 (5)ref|XP_009626056.1|3e-27PREDICTED: 14 kDa proline-rich protein DC2.15-like [Nicotiana tomentosiformis]
JMSF029F16Sequence657000805 (5)gb|KJB39719.1|8e-31hypothetical protein B456_007G027100 [Gossypium raimondii]

Alignment

This contig is upended


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JMFN009D08+                                         TATAATAAGGGCAAAAACTTGTGTGATATG
JMSF029F16+              AAAAAAAAAAAAACAGGAATATATATATATAATAAGGGCAAAAACTTGTGTGATATG
                      ____________________________________________________________
consensus                AAAAAAAAAAAAACAGGAATATATATATATAATAAGGGCAAAAACTTGTGTGATATG
 
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JMFN009D08+           AGCAGGATCTTTGATTAATGATGTCAAAGATCCTATTCGTCTCACGAATTGAGACCCGTG
JMSF013F13+                                                 GTCTCACGAATTGAGACCCGTG
JMSF029F16+           AGCAGGATCTTTGATTAATGATGTCAAAGATCCTATTCGTCTCACGAATTGAGACCCGTG
                      ____________________________________________________________
consensus             AGCAGGATCTTTGATTAATGATGTCAAAGATCCTATTCGTCTCACGAATTGAGACCCGTG
 
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JMFN009D08+           CAATGAGACGGTCTCACACAAGTGTTACCCAATAATAGAGCATAGGTGAGGATGAATAAT
JMSF013F13+           CAATGAGACGGTCTCACACAAGTGTTACCCAATAATAGAGCATAGGTGAGGATGAATAAT
JMSF022E13+                                                             GATGAATAAT
JMSF029F16+           CAATGAGACGGTCTCACACAAGTGTTACCCAATAATAGAGCATAGGTGAGGATGAATAAT
                      ____________________________________________________________
consensus             CAATGAGACGGTCTCACACAAGTGTTACCCAATAATAGAGCATAGGTGAGGATGAATAAT
 
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JMFN009D08+           TATTCGCATTTGAAGCCAGCTGGGTCAACCTTGGAGCAAGCATTGAGGAGCAAGCTGAGT
JMSF013F13+           TATTCGCATTTGAAGCCAGCTGGGTCAACCTTGGAGCAAGCATTGAGGAGCAAGCTGAGT
JMSF022E13+           TATTNNCATTTGAANCCAGNTGGNTCAACCTTGGANCAAGCATTGAGGAGCAAGNTGAGT
JMSF029F16+           TATTCGCATTTGAAGCCAGCTGGGTCAACCTTGGAGCAAGCATTGAGGAGCAAGCTGAGT
                      ____________________________________________________________
consensus             TATTCGCATTTGAAGCCAGCTGGGTCAACCTTGGAGCAAGCATTGAGGAGCAAGCTGAGT
 
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JMFN009D08+           GAGATGGGGACATTAAGGTTAATGCCCAAAACATTAGCCTTAAGAGCCGTGCAGAGGCAA
JMSF013F13+           GAGATGGGGACATTAAGGTTAATGCCCAAAACATTAGCCTTAAGAGCCGTGCAGAGGCAA
JMSF022E13+           GAGATGGGGACATTAAGGTTAATGCCCAAAACATTAGCCTTAAGAGCCGTGCAGAGGCAA
JMSF029F16+           GAGATGGGGACATTAAGGTTAATGCCCAAAACATTAGCCTTAAGAGCCGTGCAGAGGCAA
                      ____________________________________________________________
consensus             GAGATGGGGACATTAAGGTTAATGCCCAAAACATTAGCCTTAAGAGCCGTGCAGAGGCAA
 
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JMFN009D08+           ACAGCCGCGTCCACGTCGGCCAAGGGGCTAAGAAGCGAGCAGCACGGCTCCTTGTCGGCT
JMSF013F13+           ACAGCCGCGTCCACGTCGGCCAAGGGGCTAAGAAGCGAGCAGCACGGCTCCTTGTCGGCT
JMSF022E13+           ACAGCCGCNTCCACGTCGGCCAAGGGGCTAAGAAGCGAGCAGCACGGCTCCTTGTCGGCT
JMSF029F16+           ACAGCCGCGTCCACGTCGGCCAAGGGGCTAAGAAGCGAGCAGCACGGCTCCTTGTCGGCT
                      ____________________________________________________________
consensus             ACAGCCGCGTCCACGTCGGCCAAGGGGCTAAGAAGCGAGCAGCACGGCTCCTTGTCGGCT
 
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JMFN009D08+           CCAATCACCACCTTCACTAAGCCTAGCACGTCGGCGCAAACTCCCAGCTTCAGGGTGTCA
JMSF013F13+           CCAATCACCACCTTCACTAAGCCTAGCACGTCGGCGCAAACTCCCAGCTTCAGGGTGTCA
JMSF022E13+           CCAATCACCACCTTCACTAAGCCTAGCACGTCGGCGCAAACTCCCAGCTTCAGGGTGTCA
JMSF002M16+                                                           TTCAGGGTGTCA
JMSF029F16+           CCAATCACCACCTTCACTAAGCCTAGCACGTCGGCGCAAACTCCCAGCTTCAGGGTGTCA
                      ____________________________________________________________
consensus             CCAATCACCACCTTCACTAAGCCTAGCACGTCGGCGCAAACTCCCAGCTTCAGGGTGTCA
 
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JMFN009D08+           ATGGGGCAGCTGGCTTTTGGAGCCGGAACTGGAACTGGAGTAGACGGCGGCGGAGGACAT
JMSF013F13+           ATGGGGCAGCTGGCTTTTGGAGCCGGAACTGGAACTGGAGTAGACGGCGGCGGAGGACAT
JMSF022E13+           ATGGGGCAGCTGGCTTTTGGAGCCGGAACTGGAACTGGAGTAGACGGCGGCGGAGGACAT
JMSF002M16+           ATGGGGCAGCTGGCTTTNGGAGCCGGAACTGGAACTGGAGTAGACGGCGGCGGAGGACAT
JMSF029F16+           ATGGGGCAGCTGGCTTTTGGAGCCGGAACTGGAACTGGAGTAGACGGCGGCGGAGGACAT
                      ____________________________________________________________
consensus             ATGGGGCAGCTGGCTTTTGGAGCCGGAACTGGAACTGGAGTAGACGGCGGCGGAGGACAT
 
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JMFN009D08+           GCCGGCTTCGGCTTCGGCTTCACGCAGGAGCCGCAGCCGGACACGGAAGCGAAGAGGACA
JMSF013F13+           GCCGGCTTCGGCTTCGGCTTCACGCAGGAGCCGCAGCCGGACACGGAAGCGAAGAGGACA
JMSF022E13+           GCCGGCTTCGGCTTCGGCTTCACGCAGGAGCCGCAGCCGGACACGGAAGCGAAGAGGACA
JMSF002M16+           GCCGGCTTCGGCTTCGGCTTCACGCAGGAGCCGCAGCCGGACACGGAAGCGAAGAGGACA
JMSF029F16+           GCCGGCTTCGGCTTCGGCTTCACGCAGGAGCCGCAGCCGGACACGGAAGCGAAGAGGACA
                      ____________________________________________________________
consensus             GCCGGCTTCGGCTTCGGCTTCACGCAGGAGCCGCAGCCGGACACGGAAGCGAAGAGGACA
 
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JMFN009D08+           AGGTTGAGGGCAAAGAAAAGAGCCAACGAAGAGGAAGCTCTGTTGGAAGAAGCCATAGCC
JMSF013F13+           AGGTTGAGGGCAAAGAAAAGAGCCAACGAAGAGGAAGCTCTGTTGGAAGAAGCCATAGCC
JMSF022E13+           AGGTTGAGGGCAAAGAAAAGAGCCAACGAAGAGGAAGCTCTGTTGGAAGAAGCCATAGCC
JMSF002M16+           AGGTTGAGGGCAAAGAAAAGAGCCAACGAAGAGGAAGCTCTGTTGGAAGAAGCCATAGCC
JMSF029F16+           AGGTTGAGGGCAAAGAAAAGAGCCAACGAAGAGGAAGCTCTGTTGGAAGAAGCCATAGCC
                      ____________________________________________________________
consensus             AGGTTGAGGGCAAAGAAAAGAGCCAACGAAGAGGAAGCTCTGTTGGAAGAAGCCATAGCC
 
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JMFN009D08+           ATTGATATGATATACGAAGCTAAGTAATAATATTTCA                       
JMSF013F13+           ATTGATATGATATACGAAGCTAAGTAATAATATTTCAGGCTTTAGCTTTAGAATGGTG  
JMSF022E13+           ATTGATATGATATACGAAGCTAAGTAATAATATTTCAGGCTTTAGCTTTAGAATGGTG  
JMSF002M16+           ATTGATATGATATACGAAGCTAAGTAATAATATTTCAGGCTTTAGCTTTAGAATGGTG  
JMSF029F16+           ATTGATATGATATACGAAGCTAAGTAATAATATTTCAGGCTTTAGCTTTAGAATGGTGCC
                      ____________________________________________________________
consensus             ATTGATATGATATACGAAGCTAAGTAATAATATTTCAGGCTTTAGCTTTAGAATGGTGCC