Contig 000804:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN029I14Sequence521000804 (2)gb|EYU26945.1|7e-67hypothetical protein MIMGU_mgv1a010898mg [Erythranthe guttata]
JMSF029F05Sequence668000804 (2)ref|XP_006349334.1|1e-88PREDICTED: probable sodium/metabolite cotransporter BASS2, chloroplastic-like i111024599ref|XP_009788444.1|1e-06PREDICTED: probable sodium/metabolite cotransporter BASS2, chloroplastic isofor

Alignment

This contig is upended


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JMFN029I14+             CTTTGTGGTTCCCCAAAACCACCAAAAGCTGCAGTGAGATACCCTACAAAGAACCCAG
                      ____________________________________________________________
consensus               CTTTGTGGTTCCCCAAAACCACCAAAAGCTGCAGTGAGATACCCTACAAAGAACCCAG
 
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JMFN029I14+           CAAAATGCAGCAACAGTACGGAAAGCATGACAACCCCAAAGTCACTGGAGAGTACCGCTT
                      ____________________________________________________________
consensus             CAAAATGCAGCAACAGTACGGAAAGCATGACAACCCCAAAGTCACTGGAGAGTACCGCTT
 
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JMFN029I14+           TAGCAAGGTGAAGTGGAGATAAATCGGATGACAATGACACATCAAGCACCGAAGATTGCA
                      ____________________________________________________________
consensus             TAGCAAGGTGAAGTGGAGATAAATCGGATGACAATGACACATCAAGCACCGAAGATTGCA
 
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JMFN029I14+           TGCGGACAACGTTTTCTGAGAATACACTGCAAGCAAGAAGTGCCGAGGCTAAAACTGCTA
                      ____________________________________________________________
consensus             TGCGGACAACGTTTTCTGAGAATACACTGCAAGCAAGAAGTGCCGAGGCTAAAACTGCTA
 
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JMFN029I14+           GCAGGGGAGCAAAAGCCGTTACACTTCTCAGAGACTTTGGAAATTTACTCTTGACATATG
                      ____________________________________________________________
consensus             GCAGGGGAGCAAAAGCCGTTACACTTCTCAGAGACTTTGGAAATTTACTCTTGACATATG
 
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JMFN029I14+           AGCCTACGAGGATTGGAGCTACAACCACCTGCAGTGTGCTGATAGAAAGCCCAATAGCAT
                      ____________________________________________________________
consensus             AGCCTACGAGGATTGGAGCTACAACCACCTGCAGTGTGCTGATAGAAAGCCCAATAGCAT
 
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JMFN029I14+           CCACAGGAACACAAGTCCCCGCCAGAATCTTAGTCAAGATCGGGGTAAGAATCACTGCAC
JMSF029F05+                                                               CACTGCAC
                      ____________________________________________________________
consensus             CCACAGGAACACAAGTCCCCGCCAGAATCTTAGTCAAGATCGGGGTAAGAATCACTGCAC
 
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JMFN029I14+           CAAGTGTGGTACATACTGTCATCACTACAGACAATGGTACATCTCCTTGGGCGATTAAGG
JMSF029F05+           CAAGTGTGGTACATACTGTCATCACTACAGACAATGGTACATCTCCTTGGGCGATTAAGG
                      ____________________________________________________________
consensus             CAAGTGTGGTACATACTGTCATCACTACAGACAATGGTACATCTCCTTGGGCGATTAAGG
 
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JMFN029I14+           TCACCACATTGGAAGCAGTGCCTCCTGGGCAACAAGCAAGCAG                 
JMSF029F05+           TCACCACATTGGAAGCAGTGCCTCCTGGGCAACAAGCAAGCAGTATTAGGCCAACTGAAA
                      ____________________________________________________________
consensus             TCACCACATTGGAAGCAGTGCCTCCTGGGCAACAAGCAAGCAGTATTAGGCCAACTGAAA
 
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JMSF029F05+           TGGAAGGAGAGAGCCCAAGAGCTTTACTAATCATGAATCCAAATCCTGGCATAATTGTGT
                      ____________________________________________________________
consensus             TGGAAGGAGAGAGCCCAAGAGCTTTACTAATCATGAATCCAAATCCTGGCATAATTGTGT
 
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JMSF029F05+           ACTGAGCAACACATCCAAAAAGGATAGAAAGAGGTCTTTGCAAGAACAAATTCACCAAAT
                      ____________________________________________________________
consensus             ACTGAGCAACACATCCAAAAAGGATAGAAAGAGGTCTTTGCAAGAACAAATTCACCAAAT
 
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JMSF029F05+           CTCCGAGCTCCAATGTGAGCCCCATAACCAGCATGATAAATCCCAGAGTGAGGGTGTAGG
                      ____________________________________________________________
consensus             CTCCGAGCTCCAATGTGAGCCCCATAACCAGCATGATAAATCCCAGAGTGAGGGTGTAGG
 
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JMSF029F05+           AAGTGGGCCCACACTTCACGAACCATGAAAAGGTGGATGGTCTGACGCATGCAACAATCC
                      ____________________________________________________________
consensus             AAGTGGGCCCACACTTCACGAACCATGAAAAGGTGGATGGTCTGACGCATGCAACAATCC
 
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JMSF029F05+           CTCCAACGGTCACATAGACTGGGTAGAGACTTGCGGCACTGGAGAGGAAGCTCTCCCATC
                      ____________________________________________________________
consensus             CTCCAACGGTCACATAGACTGGGTAGAGACTTGCGGCACTGGAGAGGAAGCTCTCCCATC
 
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JMSF029F05+           TGGGCTTTTCTGGAGTCACGGGCAGGTGATGGGAGCTTTCATGAACGGACTTGACGGTGA
                      ____________________________________________________________
consensus             TGGGCTTTTCTGGAGTCACGGGCAGGTGATGGGAGCTTTCATGAACGGACTTGACGGTGA
 
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JMSF029F05+           ATAGGCGCGGCTTTGAAGGATCTGTTGTTAGTGAAACGGTGGAGCTTATGGGTTTATGCA
                      ____________________________________________________________
consensus             ATAGGCGCGGCTTTGAAGGATCTGTTGTTAGTGAAACGGTGGAGCTTATGGGTTTATGCA
 
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JMSF029F05+           GAAGAAACCTCTGGTGGGTCTTCAAGTGTGTGGTGGTGAGTGGATTGAGTCGCAGAGAAA
                      ____________________________________________________________
consensus             GAAGAAACCTCTGGTGGGTCTTCAAGTGTGTGGTGGTGAGTGGATTGAGTCGCAGAGAAA
 
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JMSF029F05+           TCGCCATTGCTGCTCGTTATAGCAAGAGAAGCTCCCAGCTTTGGTCGGTTTTGTCGACCC
                      ____________________________________________________________
consensus             TCGCCATTGCTGCTCGTTATAGCAAGAGAAGCTCCCAGCTTTGGTCGGTTTTGTCGACCC