| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004D02 | Sequence | 512 | 000802 (7) | ref|XP_009794293.1| | 2e-16 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | |||||
| JMFF040C15 | Sequence | 546 | 000802 (7) | ref|XP_009794293.1| | 3e-21 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | |||||
| JMSF006H06 | Sequence | 378 | 000802 (7) | ||||||||
| JMSF013G23 | Sequence | 216 | 000802 (7) | ||||||||
| JMSF029B16 | Sequence | 655 | 000802 (7) | ref|XP_009794293.1| | 2e-40 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | 682 | 009998 (6) | ref|XP_004250405.1| | 2e-30 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont |
| JMSF035N21 | Sequence | 681 | 000802 (7) | ref|XP_009794293.1| | 3e-47 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | 255 | 009998 (6) | |||
| JMSF037I24 | Sequence | 648 | 000802 (7) | ref|XP_009794293.1| | 3e-42 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont | 660 | 009998 (6) | ref|XP_004250405.1| | 2e-30 | PREDICTED: receptor homology region, transmembrane domain- and RING domain-cont |
This contig is upended
. : . : . : . : . : . :
JMSF035N21+ TTCCTGCCATTGCCACTAGAT
____________________________________________________________
consensus TTCCTGCCATTGCCACTAGAT
. : . : . : . : . : . :
JMSF037I24+ TATTCACTGTCGTAGACTATGGCCGCTTTAAACCCCGCCACTTGTGCTCTCTTAA
JMSF035N21+ CTCCATATTCACTGTCGTAGACTATGGCCGCTTTAAACCCCGCCACTTGTGCTCTCTTAA
JMSF029B16+ TATTCACTGTCGTAGACTATGGCCGCTTTAAACCCCGCCACTTGTGCTCTCTTAA
____________________________________________________________
consensus CTCCATATTCACTGTCGTAGACTATGGCCGCTTTAAACCCCGCCACTTGTGCTCTCTTAA
. : . : . : . : . : . :
JMSF037I24+ CTTTCTCCTCGAAGCTGCATCCTCCCCTAATTATCAACACAAACGGAGACTTTGTGCTGT
JMSF035N21+ CTTTCTCCTCGAAGCTGCATCCTCCCCTAATTATCAACACAAACGGAGACTTTGTGCTGT
JMFF040C15+ ACGGAGACTTTGTGCTGT
JMSF029B16+ CTTTCTCCTCGAAGCTGCATCCTCCCCTAATTATCAACACAAACGGAGACTTTGTGCTGT
____________________________________________________________
consensus CTTTCTCCTCGAAGCTGCATCCTCCCCTAATTATCAACACAAACGGAGACTTTGTGCTGT
. : . : . : . : . : . :
JMSF037I24+ TTTCTACAACCTCCACTTTATTACTCAACGGTGAGCACGCATCCAATGGCTCAGCAACAT
JMSF035N21+ TTTCTACAACCTCCACTTTATTACTCAACGGTGAGCACGCATCCAATGGCTCAGCAACAT
JMFF040C15+ TTTCTACAACCTCCACTTTATTACTCAACGGTGAGCACGCATCCAATGGCTCAGCAACAT
JMFF004D02+ TTATTACTCAACGGTGAGCACGCATCCAATGGCTCAGCAACAT
JMSF029B16+ TTTCTACAACCTCCACTTTATTACTCAACGGTGAGCACGCATCCAATGGCTCAGCAACAT
____________________________________________________________
consensus TTTCTACAACCTCCACTTTATTACTCAACGGTGAGCACGCATCCAATGGCTCAGCAACAT
. : . : . : . : . : . :
JMSF037I24+ ACAATGTCCCGCACTGCCCTGATCCCTTTGCCGAGGGAGCAAAATTAGCCTCGATGTCTT
JMSF035N21+ ACAATGTCCCGCACTGCCCTGATCCCTTTGCCGAGGGAGCAAAATTAGCCTCGATGTCTT
JMFF040C15+ ACAATGTCCCGCACTGCCCTGATCCCTTTGCCGAGGGAGCAAAATTAGCCTCGATGTCTT
JMFF004D02+ ACAATGTCCCGCACTGCCCTGATCCCTTTGCCGAGGGAGCAAAATTAGCCTCGATGTCTT
JMSF006H06+ T
JMSF029B16+ ACAATGTCCCGCACTGCCCTGATCCCTTTGCCGAGGGAGCAAAATTAGCCTCGATGTCTT
____________________________________________________________
consensus ACAATGTCCCGCACTGCCCTGATCCCTTTGCCGAGGGAGCAAAATTAGCCTCGATGTCTT
. : . : . : . : . : . :
JMSF037I24+ CGAATGAAGAGGTAACGTTTCTACCGATCAAAACTACATTGGCAAGGGCAGGAGGAGCCG
JMSF035N21+ CGAATGAAGAGGTAACGTTTCTACCGATCAAAACTACATTGGCAAGGGCAGGAGGAGCCG
JMFF040C15+ CGAATGAAGAGGTAACGTTTCTACCGATCAAAACTACATTGGCAAGGGCAGGAGGAGCCG
JMFF004D02+ CGAATGAAGAGGTAACGTTTCTACCGATCAAAACTACATTGGCAAGGGCAGGAGGAGCCG
JMSF006H06+ CGAATGAAGAGGTAACGTTTCTACCGATCAAAACTACATTGGCAAGGGCAGGAGGAGCCG
JMSF029B16+ CGAATGAAGAGGTAACGTTTCTACCGATCAAAACTACATTGGCAAGGGCAGGAGGAGCCG
____________________________________________________________
consensus CGAATGAAGAGGTAACGTTTCTACCGATCAAAACTACATTGGCAAGGGCAGGAGGAGCCG
. : . : . : . : . : . :
JMSF037I24+ TCAGGAACGCAAAACACAAGAAAAAGAGGGGAAATAATACCCAGAGTTTCAGCATAGCTC
JMSF035N21+ TCAGGAACGCAAAACACAAGAAAAAGAGGGGAAATAATACCCAGAGTTTCAGCATAGCTC
JMFF040C15+ TCAGGAACGCAAAACACAAGAAAAAGAGGGGAAATAATACCCAGAGTTTCAGCATAGCTC
JMFF004D02+ TCAGGAACGCAAAACACAAGAAAAAGAGGGGAAATAATACCCAGAGTTTCAGCATAGCTC
JMSF006H06+ TCAGGAACGCAAAACACAAGAAAAAGAGGGGAAATAATACCCAGAGTTTCAGCATAGCTC
JMSF029B16+ TCAGGAACGCAAAACACAAGAAAAAGAGGGGAAATAATACCCAGAGTTTCAGCATAGCTC
____________________________________________________________
consensus TCAGGAACGCAAAACACAAGAAAAAGAGGGGAAATAATACCCAGAGTTTCAGCATAGCTC
. : . : . : . : . : . :
JMSF037I24+ CAATTCCAAAATTCAAAACCCTAATAGCCCTTATCTTGGACATACAAACAAAATATGAGA
JMSF035N21+ CAATTCCAAAATTCAAAACCCTAATAGCCCTTATCTTGGACATACAAACAAAATATGAGA
JMFF040C15+ CAATTCCAAAATTCAAAACCCTAATAGCCCTTATCTTGGACATACAAACAAAATATGAGA
JMFF004D02+ CAATTCCAAAATTCAAAACCCTAATAGCCCTTATCTTGGACATACAAACAAAATATGAGA
JMSF006H06+ CAATTCCAAAATTCAAAACCCTAATAGCCCTTATCTTGGACATACAAACAAAATATGAGA
JMSF013G23+ TGGACATACAAACAAAATATGAGA
JMSF029B16+ CAATTCCAAAATTCAAAACCCTAATAGCCCTTATCTTGGACATACAAACAAAATATGAGA
____________________________________________________________
consensus CAATTCCAAAATTCAAAACCCTAATAGCCCTTATCTTGGACATACAAACAAAATATGAGA
. : . : . : . : . : . :
JMSF037I24+ ACAAATCACAGGTTTGACGCGAGGATGATAGAAACATCGGCTTCCATATTCTCAGCAATC
JMSF035N21+ ACAAATCACAGGTTTGACGCGAGGATGATAGAAACATCGGCTTCCATATTCTCAGCAATC
JMFF040C15+ ACAAATCACAGGTTTGACGCGAGGATGATAGAAACATCGGCTTCCATATTCTCAGCAATC
JMFF004D02+ ACAAATCACAGGTTTGACGCGAGGATGATAGAAACATCGGCTTCCATATTCTCAGCAATC
JMSF006H06+ ACAAATCACAGGTTTGACGCGAGGATGATAGAAACATCGGCTTCCATATTCTCAGCAATC
JMSF013G23+ ACAAATCACAGGTTTGACGCGAGGATGATAGAAACATCGGCTTCCATATTCTCAGCAATC
JMSF029B16+ ACAAATCACAGGTTTGACGCGAGGATGATAGAAACATCGGCTTCCATATTCTCAGCAATC
____________________________________________________________
consensus ACAAATCACAGGTTTGACGCGAGGATGATAGAAACATCGGCTTCCATATTCTCAGCAATC
. : . : . : . : . : . :
JMSF037I24+ CCTATTCATCCTGGTATTGTGCCCACTGGTTTGGATAAGGAAATTGGGTTTTCAGGGGCT
JMSF035N21+ CCTATTCATCCTGGTATTGTGCCCACTGGTTTGGATAAGGAAATTGGGTTTTCAGGGGCT
JMFF040C15+ CCTATTCATCCTGGTATTGTGCCCACTGGTTTGGATAAGGAAATTGGGTTTTCAGGGGCT
JMFF004D02+ CCTATTCATCCTGGTATTGTGCCCACTGGTTTGGATAAGGAAATTGGGTTTTCAGGGGCT
JMSF006H06+ CCTATTCATCCTGGTATTGTGCCCACTGGTTTGGATAAGGAAATTGGGTTTTCAGGGGCT
JMSF013G23+ CCTATTCATCCTGGTATTGTGCCCACTGGTTTGGATAAGGAAATTGGGTTTTCAGGGGCT
JMSF029B16+ CCTATTCATCCTGGTATTGTGCCCACTGGTTTGGATAAGGAAATTGGGTTTTCAGGGGCT
____________________________________________________________
consensus CCTATTCATCCTGGTATTGTGCCCACTGGTTTGGATAAGGAAATTGGGTTTTCAGGGGCT
. : . : . : . : . : . :
JMSF037I24+ TCAAAGTTATCCAAATTTTTGTTTTCAATTTTGGAGAAAAAATTGAAGCTTTTTTCGGAT
JMSF035N21+ TCAAAGTTATCCAAATTTTTGTTTTCAATTTTGGAGAAAAAATTGAAGCTTTTTTCGGAT
JMFF040C15+ TCAAAGTTATCCAAATTTTTGTTTTCAATTTTGGAGAAAAAATTGAAGCTTTTTTCGGAT
JMFF004D02+ TCAAAGTTATCCAAATTTTTGTTTTCAATTTTGGAGAAAAAATTGAAGCTTTTTTCGGAT
JMSF006H06+ TCAAAGTTATCCAAATTTTTGTTTTCAATTTTGGAGAAAAAATTGAAGCTTTTTTCGGAT
JMSF013G23+ TCAAAGTTATCCAAATTTTTGTTTTCAATTTTGGAGAAAAAATTGAAGCTTTTTTCGGAT
JMSF029B16+ TCAAAGTTATCCAAATTTTTGTTTTCAATTTTGGAGAAAAAATTGAAGCTTTTTTCGGAT
____________________________________________________________
consensus TCAAAGTTATCCAAATTTTTGTTTTCAATTTTGGAGAAAAAATTGAAGCTTTTTTCGGAT
. : . : . : . : . : . :
JMSF037I24+ GAAAGAAAAGCAAGGTAGATCAAGGTTTTTCCTTTTTTTATTATGATT
JMSF035N21+ GAAAGAAAAGCAAGGTAGATCAAGGTTTTTCCTTTTTTTATTATGATTAGTTCAGAGC
JMFF040C15+ GAAAGAAAAGCAAGGTAGATCAAGGTTTTTCCTTTTTTTATTAT
JMFF004D02+ GAAAGAAAAGCAAGGTAGATCAAGGTTTTTCCTTTTTTTATTATGATT
JMSF006H06+ GAAAGAAAAGCAAGG
JMSF013G23+ GAAAGAAAAGC
JMSF029B16+ GAAAGAAAAGCAAGGTAGATCAAGGTTTTTCCTTTTTTTATTATGATTAGTTCAGAGCTC
____________________________________________________________
consensus GAAAGAAAAGCAAGGTAGATCAAGGTTTTTCCTTTTTTTATTATGATTAGTTCAGAGCTC