Contig 000799:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011M01Sequence533000799 (17)ref|XP_011082617.1|1e-33PREDICTED: histone H1-like [Sesamum indicum]
JMFF012G22Sequence532000799 (17)ref|XP_011082617.1|5e-34PREDICTED: histone H1-like [Sesamum indicum]776002684 (24)ref|XP_011082617.1|3e-12PREDICTED: histone H1-like [Sesamum indicum]
JMFF014P19Sequence570000799 (17)ref|XP_011082617.1|1e-36PREDICTED: histone H1-like [Sesamum indicum]372002684 (24)
JMFF023G09Sequence422000799 (17)ref|XP_011082617.1|1e-22PREDICTED: histone H1-like [Sesamum indicum]776002684 (24)ref|XP_011082617.1|3e-09PREDICTED: histone H1-like [Sesamum indicum]
JMFF024F13Sequence427000799 (17)ref|XP_011082617.1|2e-23PREDICTED: histone H1-like [Sesamum indicum]727002684 (24)
JMFF024O17Sequence426000799 (17)ref|XP_011082617.1|2e-23PREDICTED: histone H1-like [Sesamum indicum]775002684 (24)ref|XP_011082617.1|6e-04PREDICTED: histone H1-like [Sesamum indicum]
JMFF026I02Sequence537000799 (17)ref|XP_011082617.1|5e-34PREDICTED: histone H1-like [Sesamum indicum]770002684 (24)
JMFF032B05Sequence537000799 (17)ref|XP_011082617.1|8e-33PREDICTED: histone H1-like [Sesamum indicum]708002684 (24)
JMFF038G15Sequence533000799 (17)ref|XP_011082617.1|5e-34PREDICTED: histone H1-like [Sesamum indicum]742002684 (24)ref|XP_011082617.1|6e-04PREDICTED: histone H1-like [Sesamum indicum]
JMFF043E20Sequence634000799 (17)ref|XP_011082617.1|7e-37PREDICTED: histone H1-like [Sesamum indicum]595002684 (24)
JMFF044F16Sequence621000799 (17)ref|XP_011082617.1|2e-35PREDICTED: histone H1-like [Sesamum indicum]570002684 (24)
JMFF045D23Sequence627000799 (17)ref|XP_011082617.1|5e-33PREDICTED: histone H1-like [Sesamum indicum]610002684 (24)
JMFF047J10Sequence601000799 (17)ref|XP_011082617.1|5e-34PREDICTED: histone H1-like [Sesamum indicum]494002684 (24)
JMFN044B19Sequence473000799 (17)ref|XP_011082617.1|3e-34PREDICTED: histone H1-like [Sesamum indicum]
JMSF013I21Sequence229000799 (17)745002684 (24)
JMSF027I23Sequence669000799 (17)ref|XP_011082617.1|2e-36PREDICTED: histone H1-like [Sesamum indicum]739002684 (24)ref|XP_011082617.1|1e-04PREDICTED: histone H1-like [Sesamum indicum]
JMSF028L16Sequence665000799 (17)ref|XP_011082617.1|1e-36PREDICTED: histone H1-like [Sesamum indicum]742002684 (24)ref|XP_011082617.1|1e-04PREDICTED: histone H1-like [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+                                                             TTCGGCTTGG
JMSF028L16+                                                                 GCTTGG
                      ____________________________________________________________
consensus                                                               TTCGGCTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           CCGCGGCTTTGGGCTTGGCAGCAGCCTTGGCCTTAGGCTTAGGCTTGGGCTTGGCAGGGG
JMFF043E20+                             CAGCAGCCTGGCCCTTAGGCTTAGGCTTGGGCTTGGCAGGGG
JMFF044F16+                                            TAGGCTTAGGCTTGGGCTGGCANGGGG
JMFF045D23+                                                              TGGCAGGGG
JMFF047J10+                                                                GCAGGGG
JMSF028L16+           CCGCGGCTTTGGGCTTGGCAGCAGCCTTGGCCTTAGGCTTAGGCTTGGGCTTGGCAGGGG
                      ____________________________________________________________
consensus             CCGCGGCTTTGGGCTTGGCAGCAGCCTTGGCCTTAGGCTTAGGCTTGGGCTTGGCAGGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           CAGCAGCCTTCTTCTCCTT-GGTAGCCTTTGGCTTCGCCGCCGTCGCAGGCTTCTTCTTC
JMFF043E20+           CAGCAGCCTTCTTCTCCTT-GGTAGCCTTTGGCTTCGCCGCCGTCGCAGGCTTCTTCTTC
JMFF044F16+           CAGCAGCCTTCTTCTCCTT-GGTAGCCTTTGGCTTCGCCGCCGTCGCAGGCTTCTTCTTC
JMFF045D23+           CAGCAGCCTTCTTCTCCTT-GGTAGCCTTTGGCTTCGCCGCCGTCGCAGGCTTCTTCTTC
JMFF014P19+                                      TTTGGCTTCGCCGCCGTCGCAGGCTTNTTCTTC
JMFF047J10+           CAGCAGCNTTCTTCTCCTTGGGTAGCCTTGGGCTTCGCCGCCGTCGCAGGCTCCTT-TTC
JMFF032B05+                                                                     TC
JMFF026I02+                                                                     TC
JMSF028L16+           CAGCAGCCTTCTTCTCCTT-GGTAGCCTTTGGCTTCGCCGCCGTCGCAGGCTTCTTCTTC
                      ____________________________________________________________
consensus             CAGCAGCCTTCTTCTCCTT-GGTAGCCTTTGGCTTCGCCGCCGTCGCAGGCTTCTTCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
JMFF043E20+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
JMFF044F16+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
JMFF045D23+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGATCGAGCCGATGGAATCTTATAC
JMFF014P19+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGATCGAGCCGATGGAATCTTATAC
JMFF047J10+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
JMFF032B05+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
JMFF026I02+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
JMFF012G22+              GGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
JMFF038G15+               GAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
JMFF011M01+               GAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGATCGAGCCGATGGAATCTTATAC
JMFN044B19+                                                            GAATCTTATAC
JMSF028L16+           GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
                      ____________________________________________________________
consensus             GCCGGAGCGGCCGGTGCAGCAGGCTTGGCGGCAGACGACCGAGCCGATGGAATCTTATAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF043E20+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF044F16+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF045D23+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF014P19+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF047J10+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF032B05+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF026I02+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF012G22+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF038G15+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF011M01+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFN044B19+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
JMFF024F13+                                                           TGAACCAGCAAG
JMFF024O17+                                                            GAACCAGCAAG
JMFF023G09+                                                                CAGCAAG
JMSF028L16+           GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
                      ____________________________________________________________
consensus             GAGTTCTTCACCTTCACGAGCTTGTCAGAAGCCACAAACTTCCTCAACTGAACCAGCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF043E20+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF044F16+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF045D23+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATCTCTGGATCGCG
JMFF014P19+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATCTCTGGATCGCG
JMFF047J10+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF032B05+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF026I02+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF012G22+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF038G15+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF011M01+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATCTCTGGATCGCG
JMFN044B19+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTTTGGATCGCG
JMFF024F13+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF024O17+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMFF023G09+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
JMSF028L16+           AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
                      ____________________________________________________________
consensus             AGCTTCCTGAAATTCGGAGGCAGATTCTTCTGCTTATCCTCAATGAATTTCTGGATCGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF043E20+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF044F16+           TACTGGCTCGATCCAGTCCTCTCCTTCCGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF045D23+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF014P19+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF047J10+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF032B05+           TACTGGCTCGATCCAGTCCTCTCCTTCCGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF026I02+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF012G22+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF038G15+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF011M01+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFN044B19+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF024F13+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF024O17+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMFF023G09+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
JMSF028L16+           TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
                      ____________________________________________________________
consensus             TACTGGCTCGATCCAGTCCTCTCCTTCAGAGTCACAATCGCCTCCTGAATCATCTCAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF043E20+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF044F16+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF045D23+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF014P19+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF047J10+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF032B05+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF026I02+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF012G22+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF038G15+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF011M01+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFN044B19+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF024F13+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMFF024O17+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCGGCAGGCTTCTTAGCCTTGGTCTCC
JMFF023G09+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
JMSF028L16+           TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
                      ____________________________________________________________
consensus             TAAGGAGGATGGCTAGGGTTCTTCTTCCTGGGAGCAGCAGGCTTCTTAGCCTTGGTCTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF043E20+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF044F16+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF045D23+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF014P19+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF047J10+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTACTCCTCCTTGGAGGGC
JMFF032B05+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF026I02+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF012G22+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF038G15+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF011M01+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFN044B19+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF024F13+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF024O17+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMSF013I21+                  TCTTGNCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMFF023G09+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
JMSF028L16+           TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
                      ____________________________________________________________
consensus             TTAGCCTTCTTGGCCTTGGTGGCCTTCGCCGGAGCAGGGGCCTCCTCCTCCTTGGAGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF043E20+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF044F16+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF045D23+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF014P19+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF047J10+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF032B05+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF026I02+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF012G22+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF038G15+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF011M01+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFN044B19+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF024F13+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF024O17+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMSF013I21+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMFF023G09+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
JMSF028L16+           TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
                      ____________________________________________________________
consensus             TCAGATTCGACCGGGTCAGCCGTCACCTCCACCATAACAACCGGTTCCTCAGCAGCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF043E20+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF044F16+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF045D23+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF014P19+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF047J10+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF032B05+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF026I02+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF012G22+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF038G15+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF011M01+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFN044B19+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF024F13+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF024O17+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMSF013I21+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMFF023G09+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
JMSF028L16+           TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
                      ____________________________________________________________
consensus             TCTAGGCCTAGGGTTTGGGAAGGAGCAGAGATCAAAGGACCAAAAAGAGAGAAAAGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF027I23+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGT     
JMFF043E20+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTT       
JMFF044F16+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTATTGT     
JMFF045D23+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTC              
JMFF014P19+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGT     
JMFF047J10+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGT        
JMFF032B05+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGT     
JMFF026I02+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGCTCTCCGGTGTTGT     
JMFF012G22+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGT     
JMFF038G15+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGT     
JMFF011M01+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGT     
JMFN044B19+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCG                   
JMFF024F13+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGCTCTCCGGTGTTGT     
JMFF024O17+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGT     
JMSF013I21+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGT        
JMFF023G09+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGT     
JMSF028L16+           CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGTGTCTC
                      ____________________________________________________________
consensus             CTAGAGAGAGAGAGCTATGAAACTATACTATTTTATTTCCGTTCTCCGGTGTTGTGTCTC