Contig 000794:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008N08Sequence245000794 (5)757011739 (8)ref|XP_008361395.1|6e-86PREDICTED: CDPK-related protein kinase-like [Malus domestica]
JMSF028G09Sequence640000794 (5)ref|XP_006338215.1|1e-10PREDICTED: CDPK-related kinase 5-like [Solanum tuberosum]755011739 (8)emb|CBI29399.3|1e-17unnamed protein product [Vitis vinifera]
JMSF029B19Sequence635000794 (5)ref|XP_006338215.1|2e-06PREDICTED: CDPK-related kinase 5-like [Solanum tuberosum]735011739 (8)ref|XP_008361395.1|2e-78PREDICTED: CDPK-related protein kinase-like [Malus domestica]
JMSF031E04Sequence608000794 (5)ref|XP_009366775.1|8e-18PREDICTED: CDPK-related kinase 5-like [Pyrus x bretschneideri]776011739 (8)ref|XP_008361395.1|6e-72PREDICTED: CDPK-related protein kinase-like [Malus domestica]
JMSF044G05Sequence725000794 (5)ref|XP_006338215.1|1e-31PREDICTED: CDPK-related kinase 5-like [Solanum tuberosum]770011739 (8)ref|XP_008361395.1|1e-78PREDICTED: CDPK-related protein kinase-like [Malus domestica]

Alignment

This contig is upended


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JMSF044G05+                                     CTCTACAAGTATACCCGAAGTGCCCTCTCCCAAC
                      ____________________________________________________________
consensus                                       CTCTACAAGTATACCCGAAGTGCCCTCTCCCAAC
 
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JMSF031E04+                                 TTACCGAAATGCTTCGAAAAGCCGAAACTTTTGTCCAG
JMSF044G05+           CTCCTCACCAAGCTCGTACTTGTTACCGAAATGCTTCGAAAAGCCGAAACTTTTGTCCAG
                      ____________________________________________________________
consensus             CTCCTCACCAAGCTCGTACTTGTTACCGAAATGCTTCGAAAAGCCGAAACTTTTGTCCAG
 
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JMSF031E04+           CCCACCTTCCGATTCTGCCCCTTCGGGAATTGCCGCCCCATTCGGCTTCACCGAGCCGTG
JMSF044G05+           CCCACCTTCCGATTCTGCCCCTTCGGGAATTGCCGCCCCATTCGGCTTCACCGAGCCGTG
JMSF029B19+                       TTCTGCCCCTTCGGGAATTGCCGCCCCATTCGGCTTCACCGAGCCGTG
JMSF028G09+                               CTTCGGGAATTGCCGCCCCATTCGGCTTCACCGAGCCGTG
                      ____________________________________________________________
consensus             CCCACCTTCCGATTCTGCCCCTTCGGGAATTGCCGCCCCATTCGGCTTCACCGAGCCGTG
 
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JMSF031E04+           CCTTCGCGCCAGAACAGCTCGGATGTGCTTGGCCGGAGACGGCGGAGGGAACGGCCGCCG
JMSF044G05+           CCTTCGCGCCAGAACAGCTCGGATGTGCTTGGCCGGAGACGGCGGAGGGAACGGCCGCCG
JMSF029B19+           CCTTCGCG-CAGAACAGCTCGGATGTGCTTGGCCGGAGACGGCGGAGGGAACGGCCGCCG
JMSF028G09+           CCTTCGCGCCAGAACAGCTCGGATGTGCTTGGCCGGAGACGGCGGAGGGAACGGCCGCCG
                      ____________________________________________________________
consensus             CCTTCGCGCCAGAACAGCTCGGATGTGCTTGGCCGGAGACGGCGGAGGGAACGGCCGCCG
 
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JMSF031E04+           GAAAAACCTCCTCGGCGTGGAGTTGGAGCTAGGCGCATTCGCCGGAGATCTCGCGGGTGA
JMSF044G05+           GAAAAACCTCCTCGGCGTGGAGTTGGAGCTAGGCGCATTCGCCGGAGATCTCGCGGGTGA
JMSF029B19+           GAAAAACCTCCTCGGCGTGGAGTTGGAGCTAGGCGCATTCGCCGGAGATCTCGCGGGTGA
JMSF028G09+           GAAAAACCTCCTCGGCGTGGAGTTGGAGCTAGGCGCATTCGCCGGAGATCTCGCGGGTGA
                      ____________________________________________________________
consensus             GAAAAACCTCCTCGGCGTGGAGTTGGAGCTAGGCGCATTCGCCGGAGATCTCGCGGGTGA
 
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JMSF031E04+           CTTTTTGGCGAACAGGTAGTGCGCAGGGCTGGGACTGTAAAACGGGAAAAACGGCGACTT
JMSF044G05+           CTTTTTGGCGAACAGGTAGTGCGCAGGGCTGGGACTGTAAAACGGGAAAAACGGCGACTT
JMSF029B19+           CTTTTTGGCGAACAGGTAGTGCGCAGGGCTGGGACTGTAAAACGGGAAAAACGGCGACTT
JMSF028G09+           CTTTTTGGCGAACAGGTAGTGCGCAGGGCTGGGACTGTAAAACGGGAAAAACGGCGACTT
                      ____________________________________________________________
consensus             CTTTTTGGCGAACAGGTAGTGCGCAGGGCTGGGACTGTAAAACGGGAAAAACGGCGACTT
 
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JMSF031E04+           TCTTCCGCCCTCAACCTCCCCCTTCTTTATATTCCTTTGCTGATTCTCACCTCCCTGATT
JMSF044G05+           TCTTCCGCCCTCAACCTCCCCCTTCTTTATATTCCTTTGCTGATTCTCACCTCCCTGATT
JMSF029B19+           TCTTCCGCCCTCAACCTCCCCCTTCTTTATATTCCTTTGCTGATTCTCACCTCCCTGATT
JMSF028G09+           TCTTCCGCCCTCAACCTCCCCCTTCTTTATATTCCTTTGCTGATTCTCACCTCCCTGATT
                      ____________________________________________________________
consensus             TCTTCCGCCCTCAACCTCCCCCTTCTTTATATTCCTTTGCTGATTCTCACCTCCCTGATT
 
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JMSF031E04+           CTCGCCGTTATCCGGATTATCTTTCACCGGAACAGGAATACCAACATTCCTATCTGTCTG
JMSF044G05+           CTCGCCGTTATCCGGATTATCTTTCACCGGAACAGGAATACCAACATTCCTATCTGTCTA
JMSF029B19+           CTCGCCGTTATCCGGATTATCTTTCACCGGAACAGGAATACCAACATTCCTATCTGTCTG
JMSF028G09+           CTCGCCGTTATCCGGATTATCTTTCACCGGAACAGGAATACCAACATTCCTATCTGTCTG
                      ____________________________________________________________
consensus             CTCGCCGTTATCCGGATTATCTTTCACCGGAACAGGAATACCAACATTCCTATCTGTCTG
 
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JMSF031E04+           CTGATCATTCCTCCAATCCCTGTGTTCTAAGGAGGGTTTGGAGGTGCAAACACCCATTGC
JMSF044G05+           CTGATCATTCCTCCAATCCCTGTGTTCTAAGGAGGGTTTGGAGGTGCAAACACCCATTGC
JMSF029B19+           CTGATCATTCCTCCAATCCCTGTGTTCTAAGGAGGGTTTGGAGGTGCAAACACCCATTGC
JMSF008N08+                                                      GTGCAAACACCCATTGC
JMSF028G09+           CTGATCATTCCTCCAATCCCTGTGTTCTAAGGAGGGTTTGGAGGTGCAAACACCCATTGC
                      ____________________________________________________________
consensus             CTGATCATTCCTCCAATCCCTGTGTTCTAAGGAGGGTTTGGAGGTGCAAACACCCATTGC
 
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JMSF031E04+           TGACTTGCGTTCCCCTCAGCTTCTCCTCCAAACACAATTTATTTCTTTAACCCAAACCCA
JMSF044G05+           TGACTTGCGTTCCCCTCAGCTTCTCCTCCAAACACAATTTATTTCTTTAACCCAAACCCA
JMSF029B19+           TGACTTGCGTTCCCCTCAGCTTCTCCTCCAAACACAATTTATTTCTTTAACCCAAACCCA
JMSF008N08+           TGACTTGCGTTCCCNTCAGCTTCTCCTCCAAACACAATTTATTTCTTTAACCCAAACCCA
JMSF028G09+           TGACTTGCGTTCCCCTCAGCTTCTCCTCCAAACACAATTTATTTCTTTAACCCAAACCCA
                      ____________________________________________________________
consensus             TGACTTGCGTTCCCCTCAGCTTCTCCTCCAAACACAATTTATTTCTTTAACCCAAACCCA
 
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JMSF031E04+           GGAAAAAAAATCCCCAGAAAATCTAGCTCAACCCCAGAACAGAACCATCGGCATCAAAAT
JMSF044G05+           GGAAAAAAAATCCCCAGAAAATCTAGCTCAACCCCAGAACAGAACCATCGGCATCAAAAT
JMSF029B19+           GGAAAAAAAATCCCCAGAAAATCTAGCTCAACCCCAGAACAGAACCATCGGCATCAAAAT
JMSF008N08+           GGAAAAAAAATCCCCAGAAAATCTAGCTCAACCCCAGAACAGAACCATCGGCATCAAAAT
JMSF028G09+           GGAAAAAAAATCCCCAGAAAATCTAGCTCAACCCCAGAACAGAACCATCGGCATCAAAAT
                      ____________________________________________________________
consensus             GGAAAAAAAATCCCCAGAAAATCTAGCTCAACCCCAGAACAGAACCATCGGCATCAAAAT
 
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JMSF031E04+           CGCGATTACACGCAAGAATATAATAT                                  
JMSF044G05+           CGCGATTACACGCAAGAATATAATATTCTGCTAGGGTTTACTTTGAATTGGAGGACAGAA
JMSF029B19+           CGCGATTACACGCAAGAATATAATATTCTGCTAGGGTTTACTTTGAATTGGAGGACAGAA
JMSF008N08+           CGCGATTACACGCAAGAATATAATATTCTGCTAGGGTTTACTTTGAATTGGAGGACAGAA
JMSF028G09+           CGCGATTACACGCAAGAATATAATATTCTGCTAGGGTTTACTTTGAATTGGAGGACAGAA
                      ____________________________________________________________
consensus             CGCGATTACACGCAAGAATATAATATTCTGCTAGGGTTTACTTTGAATTGGAGGACAGAA
 
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JMSF044G05+           CAGAAATGGATCTGCCCTTCTGCAGAACC                               
JMSF029B19+           CAGAAATGGATCTGCCCTTCTGCAGAACCTGATAATGCGGAAACGAC             
JMSF008N08+           CAGAAATGGATCTGCCCTTCTGCAGAACCTGATAATGCGGAAACGAC             
JMSF028G09+           CAGAAATGGATCTGCCCTTCTGCAGAACCTGATAATGCGGAAACGACGATATAATCCCTC
                      ____________________________________________________________
consensus             CAGAAATGGATCTGCCCTTCTGCAGAACCTGATAATGCGGAAACGACGATATAATCCCTC