Contig 000790:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF032H04+                                                             TCTTCTTAAG
                      ____________________________________________________________
consensus                                                               TCTTCTTAAG
 
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JMSF032H04+           ACAAAGAACTCATCCTACCAAAACCACAAACCATGAGGAAGATCACATCTTCATGCACCA
                      ____________________________________________________________
consensus             ACAAAGAACTCATCCTACCAAAACCACAAACCATGAGGAAGATCACATCTTCATGCACCA
 
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JMSF032H04+           TTGGAGCAAAGAGGAAGCATGGTCATCAAAACAAGGTATTTCCCGAAACTAAACACTTAA
                      ____________________________________________________________
consensus             TTGGAGCAAAGAGGAAGCATGGTCATCAAAACAAGGTATTTCCCGAAACTAAACACTTAA
 
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JMSF032H04+           CTACATTGATTACAGTTAACTTTATGCATATAATAATTCATATGATAGCTAAACCTAGGC
                      ____________________________________________________________
consensus             CTACATTGATTACAGTTAACTTTATGCATATAATAATTCATATGATAGCTAAACCTAGGC
 
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JMSF032H04+           TTTTAGGATTAGAAACAACTTATCTGTAAATCAAATGTATTTCTACGAGTCTGACCACAT
                      ____________________________________________________________
consensus             TTTTAGGATTAGAAACAACTTATCTGTAAATCAAATGTATTTCTACGAGTCTGACCACAT
 
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JMSF032H04+           CCTGTGTGCAAAGAACAGTCTCCTCCCAATTAATTAATCTCAAAAAGTATTCCGATTTGA
                      ____________________________________________________________
consensus             CCTGTGTGCAAAGAACAGTCTCCTCCCAATTAATTAATCTCAAAAAGTATTCCGATTTGA
 
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JMSF032H04+           GATCAAATCGACGATTGCCTCTTCTACTGATGTTATCGATGTTTTGTTGATAGATCTCGG
                      ____________________________________________________________
consensus             GATCAAATCGACGATTGCCTCTTCTACTGATGTTATCGATGTTTTGTTGATAGATCTCGG
 
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JMSF032H04+           TCCACAATCAGTCTACTGATGTTATCGGTGTTTTGTTGATAGATCTCGGTCCACAATCAG
                      ____________________________________________________________
consensus             TCCACAATCAGTCTACTGATGTTATCGGTGTTTTGTTGATAGATCTCGGTCCACAATCAG
 
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JMSF032H04+           ACCTAATCGAAACGATTCTCTGTAACCCTAAACTCTGCTTCATTTTGCAATATGAGATGA
                      ____________________________________________________________
consensus             ACCTAATCGAAACGATTCTCTGTAACCCTAAACTCTGCTTCATTTTGCAATATGAGATGA
 
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JMSF032H04+           TTGCATGTCGCAGATTTGTGTTCAACACTCTGTAATCAGAAATTAGAAAACATACACTCA
JMSF003M22+                                               CAGAAATTAGAAAACATACACTCA
JMSF012I03+                                                                  ACTCA
JMSF003P06+                                                                  ACTCA
                      ____________________________________________________________
consensus             TTGCATGTCGCAGATTTGTGTTCAACACTCTGTAATCAGAAATTAGAAAACATACACTCA
 
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JMSF032H04+           GAATTCCAGATTGCCTCTCGGATCTCTAAGCTTTCTATAGAGAGATATAGTGTTTCTTCA
JMSF003M22+           GAATTCCAGATTGCCTCTCGGATCTCTAAGCTTTCTATAGAGAGATATAGTGTTTCTTCA
JMSF012I03+           GAATTCCAGATTGCCTCTCGGATCTCTAAGCTTTCTATAGAGAGATATAGTGTTTCTTCA
JMSF003P06+           GAATTCCAGATTGCCTCTCGGATCTCTAAGCTTTCTATAGAGAGATATAGTGTTTCTTCA
                      ____________________________________________________________
consensus             GAATTCCAGATTGCCTCTCGGATCTCTAAGCTTTCTATAGAGAGATATAGTGTTTCTTCA
 
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JMSF032H04+           CAGTGCTATGGTGTAGAATTTGAGAGTGAGAACACAGAGAGTGAGAGATGCTTAAGAATC
JMSF003M22+           CANTGCTATGGTGTAGAATTTGAGAGTGAGAACACAGAGAGTGAGAGATGCTTAAGAATC
JMSF012I03+           CANTGCTATGGTGTAGAATTTGAGAGTGAGAACACAGAGAGTGAGAGATGCTTAAGAATC
JMSF003P06+           CANTGCTATGGTGTAGAATTTGAGAGTGAGAACACAGAGAGTGAGAGATGCTTAAGAATC
JMSF028C07+                       GTAGAATNTGNGAGTGAGAACACAGAGAGTGNGAGATGCTTAAGAATC
                      ____________________________________________________________
consensus             CAGTGCTATGGTGTAGAATTTGAGAGTGAGAACACAGAGAGTGAGAGATGCTTAAGAATC
 
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JMSF032H04+           ACC                                                         
JMSF003M22+           ACCGGTCGAAATTGGAGATCACCGGTGATTCTTAAGGCTGGGATAGCGAGAGAGAGAGAG
JMSF012I03+           ACCGGTCGAAATTGGAGATCACCGGTGATTCTTAAGGCTGGGATAGCGAGAGAGAGAGAG
JMSF003P06+           ACCGGTCGAAATTGGAGATCACCGGTGATTCTTAAGGCTGGGATAGCGAGAGAGAGAGAG
JMSF028C07+           ACCGGTCGAAATNGGAGATCACCGGTGATTCTTAAGGCTGGGATAGCGAGAGAGAGAGAG
                      ____________________________________________________________
consensus             ACCGGTCGAAATTGGAGATCACCGGTGATTCTTAAGGCTGGGATAGCGAGAGAGAGAGAG
 
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JMSF003M22+           AGAGAGAGGTAGGTCTCTAATCAGACCAGTGAGGTCAACAACGCATATTAGGCAACCATC
JMSF012I03+           AGAGAGAGGTAGGTCTCT                                          
JMSF003P06+           AGAGAGAGGTAGGTCTCTAATCAGA-CAGTGAGGTCAACAACGCATATTAGGCAACCATC
JMSF028C07+           AGAGAGAGGTAGGTCTCTAATCAGA-CAGNGAGGTCAACAACGCATATTAGGCAACCATC
                      ____________________________________________________________
consensus             AGAGAGAGGTAGGTCTCTAATCAGA-CAGTGAGGTCAACAACGCATATTAGGCAACCATC