Contig 000789:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN009E24Sequence598000789 (4)ref|XP_011093950.1|168PREDICTED: uncharacterized protein LOC105173744 [Sesamum indicum] ref|XP_0110940
JMFN032C07Sequence598000789 (4)ref|XP_011093950.1|168PREDICTED: uncharacterized protein LOC105173744 [Sesamum indicum] ref|XP_0110940
JMSF028B21Sequence669000789 (4)emb|CDP09134.1|4e-45unnamed protein product [Coffea canephora]621000789 (4)emb|CDP09134.1|2e-45unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFN009E24+                                 GGTACGCCTAATAAATTCATGGATAAAGACAGAACACA
JMFN032C07+                                 GGTACGCCTAATAAATTCATGGATAAAGACAGAACACA
JMSF028B21+                                                                GAACACA
                      ____________________________________________________________
consensus                                   GGTACGCCTAATAAATTCATGGATAAAGACAGAACACA
 
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JMFN009E24+           ATAAGTTTACATCTGATTGCTAAGAATTCCACTTGTGAGGCAGTACAATTATGTTGGAAA
JMFN032C07+           ATAAGTTTACATCTGATTGCTAAGAATTCCACTTGTGAGGCAGTACAATTATGTTGGAAA
rJMSF028B21-                                                 GCAGTACAATTATGTTGGAAA
JMSF028B21+           ATAAGTTTACATCTGATTGCTAAGAATTCCACTTGTGAGGCAGTACAATTATGTTGGAAA
                      ____________________________________________________________
consensus             ATAAGTTTACATCTGATTGCTAAGAATTCCACTTGTGAGGCAGTACAATTATGTTGGAAA
 
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JMFN009E24+           ATAACACTAAAGGCACTGCCATCATCAAACACAGCATGTGTAACCATTCAACAAAATATG
JMFN032C07+           ATAACACTAAAGGCACTGCCATCATCAAACACAGCATGTGTAACCATTCAACAAAATATG
rJMSF028B21-          ATAACACTAAAGGCACTGCCATCATCAAACACAGCATGTGTAACCATTCAACAAAATATG
JMSF028B21+           ATAACACTAAAGGCACTGCCATCATCAAACACAGCATGTGTAACCATTCAACAAAATATG
                      ____________________________________________________________
consensus             ATAACACTAAAGGCACTGCCATCATCAAACACAGCATGTGTAACCATTCAACAAAATATG
 
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JMFN009E24+           AGAATTTTCAACTTTCAAGCTATGAGGAGTAATGCAGTTGGACCGTGATAATAAGAATGA
JMFN032C07+           AGAATTTTCAACTTTCAAGCTATGAGGAGTAATGCAGTTGGACCGTGATAATAAGAATGA
rJMSF028B21-          AGAATTTTCAACTTTCAAGCTATGAGGAGTAATGCAGTTGGACCGTGATAATAAGAATGA
JMSF028B21+           AGAATTTTCAACTTTCAAGCTATGAGGAGTAATGCAGTTGGACCGTGATAATAAGAATGA
                      ____________________________________________________________
consensus             AGAATTTTCAACTTTCAAGCTATGAGGAGTAATGCAGTTGGACCGTGATAATAAGAATGA
 
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JMFN009E24+           AATTATGCAGATTGAACCTCGAGCTTGGGGGTGTTCTCTTCGACTTTTTTTGAGTTTGGT
JMFN032C07+           AATTATGCAGATTGAACCTCGAGCTTGGGGGTGTTCTCTTCGACTTTTTTTGAGTTTGGT
rJMSF028B21-          AATTATGCAGATTGAACCTCGAGCTTGGGGGTGTTCTCTTCGACTTTTTTTGAGTTTGGT
JMSF028B21+           AATTATGCAGATTGAACCTCGAGCTTGGGGGTGTTCTCTTCGACTTTTTTTGAGTTTGGT
                      ____________________________________________________________
consensus             AATTATGCAGATTGAACCTCGAGCTTGGGGGTGTTCTCTTCGACTTTTTTTGAGTTTGGT
 
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JMFN009E24+           AGGTATCTCCAGCAGCGTTTGTTGACCCCACTAATTTTCTTGGGTGAGTCGGCAATTGGA
JMFN032C07+           AGGTATCTCCAGCAGCGTTTGTTGACCCCACTAATTTTCTTGGGTGAGTCGGCAATTGGA
rJMSF028B21-          AGGTATCTCCAGCAGCGTTTGTTGACCCCACTAATTTTCTTGGGTGAGTCGGCAATTGGA
JMSF028B21+           AGGTATCTCCAGCAGCGTTTGTTGACCCCACTAATTTTCTTGGGTGAGTCGGCAATTGGA
                      ____________________________________________________________
consensus             AGGTATCTCCAGCAGCGTTTGTTGACCCCACTAATTTTCTTGGGTGAGTCGGCAATTGGA
 
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JMFN009E24+           GTACCGTCTTTATGAGCGATGCCCCAAGCCTTTCCGTGCGTCCCACTCTTGTAGAGATTG
JMFN032C07+           GTACCGTCTTTATGAGCGATGCCCCAAGCCTTTCCGTGCGTCCCACTCTTGTAGAGATTG
rJMSF028B21-          GTACCGTCTTTATGAGCGATGCCCCAAGCCTTTCCGTGCGTCCCACTCTTGTAGAGATTG
JMSF028B21+           GTACCGTCTTTATGAGCGATGCCCCAAGCCTTTCCGTGCGTCCCACTCTTGTAGAGATTG
                      ____________________________________________________________
consensus             GTACCGTCTTTATGAGCGATGCCCCAAGCCTTTCCGTGCGTCCCACTCTTGTAGAGATTG
 
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JMFN009E24+           ATTTTGGTGATTTGGTAAGAAACGTCAGTCCAGTGGGTTTTAGCCATGTGATAGCCAATG
JMFN032C07+           ATTTTGGTGATTTGGTAAGAAACGTCAGTCCAGTGGGTTTTAGCCATGTGATAGCCAATG
rJMSF028B21-          ATTTTGGTGATTTGGTAAGAAACGTCAGTCCAGTGGGTTTTAGCCATGTGATAGCCAATG
JMSF028B21+           ATTTTGGTGATTTGGTAAGAAACGTCAGTCCAGTGGGTTTTAGCCATGTGATAGCCAATG
                      ____________________________________________________________
consensus             ATTTTGGTGATTTGGTAAGAAACGTCAGTCCAGTGGGTTTTAGCCATGTGATAGCCAATG
 
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JMFN009E24+           CCCCAGTTGGGGAGAAACTGCGCCACCTCGAAGAAGTTCTTCTTCTTCTTCCGCTTCGGC
JMFN032C07+           CCCCAGTTGGGGAGAAACTGCGCCACCTCGAAGAAGTTCTTCTTCTTCTTCCGCTTCGGC
rJMSF028B21-          CCCCAGTTGGGGAGAAACTGCGCCACCTCGAAGAAGTTCTTCTTCTTCTTCCGCTTCGGC
JMSF028B21+           CCCCAGTTGGGGAGAAACTGCGCCACCTCGAAGAAGTTCTTCTTCTTCTTCCGCTTCGGC
                      ____________________________________________________________
consensus             CCCCAGTTGGGGAGAAACTGCGCCACCTCGAAGAAGTTCTTCTTCTTCTTCCGCTTCGGC
 
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JMFN009E24+           TTCTTAACGCCGGCCGCCGCCGCCTCAGCCGGAGGATTGAGAGGAGTGGCTGAAGTGCTC
JMFN032C07+           TTCTTAACGCCGGCCGCCGCCGCCTCAGCCGGAGGATTGAGAGGAGTGGCTGAAGTGCTC
rJMSF028B21-          TTCTTAACGCCGGCCGCCGCCGCCTCAGCCGGAGGATTGGGAGGAGTGGCTGAAGTGCTC
JMSF028B21+           TTCTTAACGCCGGCCGCCGCCGCCTCAGCCGGAGGATTGGGAGGAGTGGCTGAAGTGCTC
                      ____________________________________________________________
consensus             TTCTTAACGCCGGCCGCCGCCGCCTCAGCCGGAGGATTGGGAGGAGTGGCTGAAGTGCTC
 
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JMFN009E24+           AGATTTCTCAGGAAGTTGAA                                        
JMFN032C07+           AGATTTCTCAGGAAGTTGAA                                        
rJMSF028B21-          AGATTTCTCAGGAAGTTGAAGGAGAGTCTGAATAAACTGGCGGCTCGATCCGCCGATGGC
JMSF028B21+           AGATTTCTCAGGAAGTTGAAGGAGAGTCTGAATAAACTGGCGGCTCGATCCGCCGATGGC
                      ____________________________________________________________
consensus             AGATTTCTCAGGAAGTTGAAGGAGAGTCTGAATAAACTGGCGGCTCGATCCGCCGATGGC
 
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rJMSF028B21-          CTTGCTAGAGCAGTCGCCATTGTTTTCCAATCAGCCAACTGCAGAATCTGCTGCCCTTCC
JMSF028B21+           CTTGCTAGAGCAGTCGCCATTGTTTTCCAATCAGCCAACTGCAGAATCTGCTGCCCTTCC
                      ____________________________________________________________
consensus             CTTGCTAGAGCAGTCGCCATTGTTTTCCAATCAGCCAACTGCAGAATCTGCTGCCCTTCC