Contig 000784:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005O14Sequence506000784 (12)emb|CBI30712.3|3e-59unnamed protein product [Vitis vinifera]
JMFF013F17Sequence511000784 (12)ref|XP_009766951.1|2e-61PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Nicotiana sy
JMFF028C14Sequence502000784 (12)ref|XP_009766951.1|8e-61PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Nicotiana sy
JMFS007C03Sequence414000784 (12)ref|XP_009766951.1|1e-50PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Nicotiana sy
JMFS106H10Sequence627000784 (12)gb|AGE09572.1|4e-81cellulose synthase-like protein [Eucalyptus cladocalyx]
JMFS120C01Sequence614000784 (12)gb|AGE09572.1|1e-76cellulose synthase-like protein [Eucalyptus cladocalyx]
JMFS121G12Sequence568000784 (12)emb|CBI30712.3|9e-69unnamed protein product [Vitis vinifera]
JMSF015D20Sequence412000784 (12)ref|XP_009766951.1|4e-58PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Nicotiana sy
JMSF023H24Sequence651000784 (12)emb|CBI30712.3|8e-83unnamed protein product [Vitis vinifera]649002856 (3)ref|XP_008349233.1|5e-51PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Malus d
JMSF027F09Sequence673000784 (12)gb|AGE09572.1|2e-87cellulose synthase-like protein [Eucalyptus cladocalyx]649002856 (3)ref|XP_009766951.1|1e-73PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Nicotiana sy
JMSF037J11Sequence669000784 (12)dbj|BAM05565.1|2e-71cellulose synthase 1, partial [Eucalyptus pilularis] dbj|BAM05566.1| cellulose s625002856 (3)ref|XP_009591676.1|2e-65PREDICTED: LOW QUALITY PROTEIN: cellulose synthase A catalytic subunit 8 [UDP-f
JMSF049N13Sequence674000784 (12)gb|AGE09572.1|1e-88cellulose synthase-like protein [Eucalyptus cladocalyx]116022669

Alignment

This contig is upended


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JMSF049N13+                                                        CCAAGAAAACGCGAA
JMSF037J11+                                                              AAACGCGAA
JMSF027F09+                                                              AAACGCGAA
                      ____________________________________________________________
consensus                                                          CCAAGAAAACGCGAA
 
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JMSF049N13+           CCAGATCTCGCAGATGACAGAAGTAAGCCACAGAGGATAAGCACTGTCAACTGGATTTGT
JMSF037J11+           CCAGATCTCGCAGATGACAGAAGTAAGCCACAGAGGATAAGCACTGTCAACTGGATTTGT
JMSF023H24+                   CGCAGATGACAGAAGTAAGCCACAGAGGATAAGCACTGTCAACTGGATTTGT
JMFS106H10+                        ATGACAGAAGTAAGCCACAGAGGATAAGCACTGTCAACTGGATTTGT
JMFS120C01+                                          AGAGGATAAGCACTGTCAACTGGATNTGT
JMSF027F09+           CCAGATCTCGCAGATGACAGAAGTAAGCCACAGAGGATAAGCACTGTCAACTGGATTTGT
                      ____________________________________________________________
consensus             CCAGATCTCGCAGATGACAGAAGTAAGCCACAGAGGATAAGCACTGTCAACTGGATTTGT
 
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JMSF049N13+           GACTCTATAGTGGATGAAGAGGGAAAGGATTACGAGGCGCATAATGATGATAGTTCTGTA
JMSF037J11+           GACTCTATAGTGGATGAAGAGGGAAAGGATTACGAGGCGCATAATGATGATAGTTCTGTA
JMSF023H24+           GACTCTATAGTGGATGAAGAGGGAAAGGATTACGAGGCGCATAATGATGATAGTTCTGTA
JMFS121G12+                       GATGAAGAGGGAAAGGATTACGAGGCGCATAATGATGATAGTTCTGTA
JMFS106H10+           GACTCTATAGTGGATGAAGAGGGAAAGGATTACGAGGCGCATAATGATGATAGTTCTGTA
JMFS120C01+           GACTCTATAGTGGATGAAGAGGGAAAGGATTACGAGGCGCATAATGATGATAGTTCTGTA
JMSF027F09+           GACTCTATAGTGGATGAAGAGGGAAAGGATTACGAGGCGCATAATGATGATAGTTCTGTA
                      ____________________________________________________________
consensus             GACTCTATAGTGGATGAAGAGGGAAAGGATTACGAGGCGCATAATGATGATAGTTCTGTA
 
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JMSF049N13+           TGGCCCGATTTGGGACTTTGGAATTGGAATCACTGATGAAAGTGTCTCTGCAGAATCTGC
JMSF037J11+           TGGCCCGATTTGGGACTTTGGAATTGGAATCACTGATGAAAGTGTCTCTGCAGAATCTGC
JMSF023H24+           TGGCCCGATTTGGGACTTTGGAATTGGAATCACTGATGAAAGTGTCTCTGCAGAATCTGC
JMFS121G12+           TGGCCCGATTTGGGACTTTGGAATTGGAATCACTGATGAAAGTGTCTCTGCAGAATCTGC
JMFS106H10+           TGGCCCGATTTGGGACTTTGGAATTGGAATCACTGATGAAAGTGTCTCTGCAGAATCTGC
JMFS120C01+           TGGCCCGATTTGGGACTTTGGAATTGGAATCACTGATGAAAGTGTCTCTGCAGAATCTGC
JMFF013F17+                                      AATCACTGATGAAAGTGTCTCTGCAGAATCTGC
JMFF028C14+                                            TGATGAAAGTGTCTCTGCAGAATCTGC
JMFF005O14+                                        TCACTGATGAAGGTGTCTCTGCAGAATCTGC
JMSF027F09+           TGGCCCGATTTGGGACTTTGGAATTGGAATCACTGATGAAAGTGTCTCTGCAGAATCTGC
                      ____________________________________________________________
consensus             TGGCCCGATTTGGGACTTTGGAATTGGAATCACTGATGAAAGTGTCTCTGCAGAATCTGC
 
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JMSF049N13+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMSF037J11+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMSF023H24+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMFS121G12+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMFS106H10+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMFS120C01+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMFS007C03+                   GCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMFF013F17+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMFF028C14+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMFF005O14+           AGACTGCGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
JMSF027F09+           AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
                      ____________________________________________________________
consensus             AGACTGTGGCTTTTCTTCCATCTGCTGCTCTGCTGGGATTTCTTCTTCTTTTGCAGCCTT
 
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JMSF049N13+           CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMSF037J11+           CTTTTCTGGCTTTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMSF023H24+           CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMFS121G12+           CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMFS106H10+           CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMFS120C01+           CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMFS007C03+           CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMSF015D20+                CTGGC-TTTNTCTTCTTGTTTTTCTTCTCTNTCCAGCTCTCCACTCTGTTCTTCC
JMFF013F17+           CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMFF028C14+           CTTTTCTGGC----TTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMFF005O14+           CTTTTCTGGC----TTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
JMSF027F09+           CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
                      ____________________________________________________________
consensus             CTTTTCTGGC-TTTTTCTTCTTGTTTTTCTTCTCTTTCCAGCTCTCCACTCTGTTCTTCC
 
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JMSF049N13+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMSF037J11+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMSF023H24+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMFS121G12+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMFS106H10+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMFS120C01+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMFS007C03+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMSF015D20+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACANTGNTAATGT
JMFF013F17+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMFF028C14+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMFF005O14+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
JMSF027F09+           ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
                      ____________________________________________________________
consensus             ATATCGGGTTCCCCGATTCACCATTGTATTCACTGTCCATAGTAGAAACACTGCTAATGT
 
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JMSF049N13+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMSF037J11+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMSF023H24+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMFS121G12+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMFS106H10+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMFS120C01+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMFS007C03+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMSF015D20+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMFF013F17+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMFF028C14+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMFF005O14+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
JMSF027F09+           TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
                      ____________________________________________________________
consensus             TTCTAGCATGAAGTCCAAGATCTTGACTGTTATTGAGCTGAGCAGCCATGGTAGTATGGT
 
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JMSF049N13+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMSF037J11+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMSF023H24+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMFS121G12+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMFS106H10+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMFS120C01+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMFS007C03+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMSF015D20+           TGCNTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMFF013F17+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMFF028C14+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMFF005O14+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
JMSF027F09+           TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
                      ____________________________________________________________
consensus             TGCCTGATTCCTCTCTTTCTCCATCCGCCATTGCAGAGTTCTCATCATAAGGAGTGCCAC
 
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JMSF049N13+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMSF037J11+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMSF023H24+           AACGCATGCAGGCGTTGCGTCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMFS121G12+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMFS106H10+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMFS120C01+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMFS007C03+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMSF015D20+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMFF013F17+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMFF028C14+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMFF005O14+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
JMSF027F09+           AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
                      ____________________________________________________________
consensus             AACGCATGCAGGCGTTGCGGCCTTCCTTCAGCTCATACTCCACGCAAGACTTGCAGAGAG
 
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JMSF049N13+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMSF037J11+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMSF023H24+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMFS121G12+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMFS106H10+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMFS120C01+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMFS007C03+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMSF015D20+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMFF013F17+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMFF028C14+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMFF005O14+           GGTAGTTGCAATCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
JMSF027F09+           GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
                      ____________________________________________________________
consensus             GGTAGTTGCAGTCATGGCAAGCCACAAAGACTTCACCATTTGATGCCAATCCGATCTGCT
 
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JMSF049N13+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCCTT 
JMSF037J11+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCCTT 
JMSF023H24+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCCT  
JMFS121G12+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATC                   
JMFS106H10+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATC                   
JMFS120C01+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTT              
JMFS007C03+           CAC                                                         
JMSF015D20+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCC   
JMFF013F17+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCCTT 
JMFF028C14+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCCTT 
JMFF005O14+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCCTT 
JMSF027F09+           CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCCTTC
                      ____________________________________________________________
consensus             CACCGCAAACCGAGCACGAAGGAACCCCAGACTGCATCATCTTGTTGATGGCTTCCCTTC