| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004N03 | Sequence | 506 | 000779 (5) | gb|KGN59867.1| | 1e-91 | hypothetical protein Csa_3G851190 [Cucumis sativus] | 734 | 002641 (5) | ref|XP_006360121.1| | 2e-85 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum] |
| JMFF016K11 | Sequence | 509 | 000779 (5) | gb|KGN59867.1| | 7e-91 | hypothetical protein Csa_3G851190 [Cucumis sativus] | 738 | 002641 (5) | ref|XP_006360121.1| | 9e-88 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum] |
| JMFF021J06 | Sequence | 542 | 000779 (5) | gb|KGN59867.1| | 4e-97 | hypothetical protein Csa_3G851190 [Cucumis sativus] | 699 | 002641 (5) | ref|XP_006360121.1| | 7e-64 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum] |
| JMFF036J10 | Sequence | 365 | 000779 (5) | ref|XP_010468329.1| | 3e-61 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Camelina sativa] | 705 | 002641 (5) | ref|XP_006360121.1| | 6e-78 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum] |
| JMSF026M01 | Sequence | 641 | 000779 (5) | gb|KGN59867.1| | 2e-123 | hypothetical protein Csa_3G851190 [Cucumis sativus] | 709 | 002641 (5) | ref|XP_006360121.1| | 2e-72 | PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMSF026M01+ TACCACAAAGGATTGTCCCATCAGTTAGATTCAGCCAAAGA
____________________________________________________________
consensus TACCACAAAGGATTGTCCCATCAGTTAGATTCAGCCAAAGA
. : . : . : . : . : . :
JMFF021J06+ G
JMSF026M01+ TTTTCAGTCTTATCACATTTGGAACACTTCCACCCTGATGGAGGAACAACAACACCATTG
____________________________________________________________
consensus TTTTCAGTCTTATCACATTTGGAACACTTCCACCCTGATGGAGGAACAACAACACCATTG
. : . : . : . : . : . :
JMFF021J06+ TCAAGCTGTACTAGTTCCATGGCATATTTACTGGTCAGTTTCTTATCAGCTGTCCAGGCA
JMFF004N03+ GTCAGTTTCTTATCAGCTGTCCAGGCA
JMFF016K11+ GTCAGTTTNTTATCAGCTGTCCAGGCA
JMSF026M01+ TCAAGCTGTACTAGTTCCATGGCATATTTACTGGTCAGTTTCTTATCAGCTGTCCAGGCA
____________________________________________________________
consensus TCAAGCTGTACTAGTTCCATGGCATATTTACTGGTCAGTTTCTTATCAGCTGTCCAGGCA
. : . : . : . : . : . :
JMFF021J06+ GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
JMFF004N03+ GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
JMFF016K11+ GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
JMSF026M01+ GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
____________________________________________________________
consensus GCAACTTGCTCTTTCCTCTCAGCACTCTCAGCCAATAAAATAGCATCAACAGCCAACCTT
. : . : . : . : . : . :
JMFF021J06+ ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
JMFF004N03+ ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
JMFF016K11+ ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
JMFF036J10+ AAGACT
JMSF026M01+ ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
____________________________________________________________
consensus ATCTTCTCTGGCAACTCAACTGAAGGAAATGGAAGAGTCAAATAATCTGGCAATAAGACT
. : . : . : . : . : . :
JMFF021J06+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
JMFF004N03+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
JMFF016K11+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
JMFF036J10+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
JMSF026M01+ ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
____________________________________________________________
consensus ATTTGATAGCTCTCATCATACTCAGGTTCATTGTTATCAAAACCACCTTCAAGACCTATA
. : . : . : . : . : . :
JMFF021J06+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
JMFF004N03+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
JMFF016K11+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
JMFF036J10+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
JMSF026M01+ GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
____________________________________________________________
consensus GCCAAAAGAGTTGGTTTCTTGGAAGGTCTATCTTCATCAACTGCCTTCACGGTCTGCTTT
. : . : . : . : . : . :
JMFF021J06+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
JMFF004N03+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
JMFF016K11+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
JMFF036J10+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
JMSF026M01+ ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
____________________________________________________________
consensus ATATGCAAATAAACTGGGTTTCCAGTCTTTTCATAGTTCCAACCTACATACTCCTTTCCA
. : . : . : . : . : . :
JMFF021J06+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
JMFF004N03+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
JMFF016K11+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
JMFF036J10+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
JMSF026M01+ AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
____________________________________________________________
consensus AATGCTAAAAAAGTGCTCATGTCAACAAACAGTCCACCCTCAGATTTCGGAGTATCGAAG
. : . : . : . : . : . :
JMFF021J06+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
JMFF004N03+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
JMFF016K11+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
JMFF036J10+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
JMSF026M01+ GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
____________________________________________________________
consensus GAGACGCAGCATTCATGCTTGTAGATTCGAGTTGTAGGCTCTGGAATCCGAACTCGGGAG
. : . : . : . : . : . :
JMFF021J06+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAAC
JMFF004N03+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACT
JMFF016K11+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACT
JMFF036J10+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACT
JMSF026M01+ AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACTC
____________________________________________________________
consensus AGATTCGATCGAAGGAGCTCCATCCAATTTCAAACTATATGTATCGGTGTGTGAAAACTC