Contig 000776:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015C08Sequence653000776 (5)ref|XP_004249537.1|2e-82PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi595008346 (5)ref|XP_009782347.1|3e-74PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMFF045H11Sequence638000776 (5)ref|XP_004249537.1|4e-98PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi604008346 (5)ref|XP_009782347.1|2e-61PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMSF013I16Sequence491000776 (5)ref|XP_004249537.1|1e-46PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi730008346 (5)ref|XP_009782347.1|1e-102PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]
JMSF017N13Sequence250000776 (5)733008346 (5)ref|XP_010111450.1|8e-80hypothetical protein L484_021273 [Morus notabilis] gb|EXC30973.1| hypothetical p
JMSF026I03Sequence651000776 (5)ref|XP_004249537.1|2e-71PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersi744008346 (5)ref|XP_009782347.1|3e-111PREDICTED: oxysterol-binding protein-related protein 3A [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF045H11+                             GAAGTGTTCATTTTCTGCATGTGCAGCACCTATTGGAGGGTG
JMFF015C08+                   TATCATATGTGAAGTGTTCATTTTCTGCATGTGCAGCACNTATTGGAGGGTG
                      ____________________________________________________________
consensus                     TATCATATGTGAAGTGTTCATTTTCTGCATGTGCAGCACCTATTGGAGGGTG
 
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JMFF045H11+           ATGACTTACCTGC-TCTGCAATAAACCTAATTCCATCGTGGTTAACCATTTCATAAGTTT
JMFF015C08+           ATGACTTACCTGCTTCTGCAATAAACNTAATTCCATCGTGGTTAACCATTTCATAAGTTT
                      ____________________________________________________________
consensus             ATGACTTACCTGCTTCTGCAATAAACCTAATTCCATCGTGGTTAACCATTTCATAAGTTT
 
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JMFF045H11+           CACCAAGAATAGGATTAAACGGCTTCCATGTTCGCTGGATGGCATAGTACAAGGAAATAA
JMFF015C08+           CACCAAGAATAGGATTAAACGGCTTCCATGTTCGCTGGATGGCATAGTACAAGGAAATAA
JMSF026I03+                    TAGGATTAAACGGCTTCCATGTTCGCTGGATGGCATAGTACAAGGAAATAA
                      ____________________________________________________________
consensus             CACCAAGAATAGGATTAAACGGCTTCCATGTTCGCTGGATGGCATAGTACAAGGAAATAA
 
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JMFF045H11+           ACCAGGAAGCTGCATACACTAGTTTCATATGCGGGTCTTCACATTCATCTGCCAATTTTA
JMFF015C08+           ACCAGGAAGCTGCATACACTAGTTTCATATGCGGGTCTTCACATTCATCTGCCAATTTTA
JMSF013I16+                                                         ATCTGCCAATTTTA
JMSF026I03+           ACCAGGAAGCTGCATACACTAGTTTCATATGCGGGTCTTCACATTCATCTGCCAATTTTA
                      ____________________________________________________________
consensus             ACCAGGAAGCTGCATACACTAGTTTCATATGCGGGTCTTCACATTCATCTGCCAATTTTA
 
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JMFF045H11+           GGAGGTACGAGTATTCCATCAACTCTGCCATTTTCTGAAGATTTGTCATAGGTTCGCAGA
JMFF015C08+           GGAGGTACGAGTATTCCATCAACTCTGCCATTTTCTGAAGATTTGTCATAGGTTCGCAGA
JMSF013I16+           GGAGGTACGAGTATTCCATCAACTCTGCCATTTTCTGAAGATTTGTCATAGGTTCGCAGA
JMSF026I03+           GGAGGTACGAGTATTCCATCAACTCTGCCATTTTCTGAAGATTTGTCATAGGTTCGCAGA
                      ____________________________________________________________
consensus             GGAGGTACGAGTATTCCATCAACTCTGCCATTTTCTGAAGATTTGTCATAGGTTCGCAGA
 
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JMFF045H11+           TGATAACGGGCAACGATACGAGTGAGGTGACATCAGCACCTATATACTTTTGCATCACCT
JMFF015C08+           TGATAACGGGCAACGATACGAGTGAGGTGACATCAGCACCTATATACTTTTGCATCACCT
JMSF013I16+           TGATAACGGGCAACGATACGAGTGAGGTGACATCAGCACCTATATACTTTTGCATCACCT
JMSF026I03+           TGATAACGGGCAACGATACGAGTGAGGTGACATCAGCACCTATATACTTTTGCATCACCT
                      ____________________________________________________________
consensus             TGATAACGGGCAACGATACGAGTGAGGTGACATCAGCACCTATATACTTTTGCATCACCT
 
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JMFF045H11+           TCCAGTAATTGTCACGATCCTCCTGCTTCCATCTTCCCTTCTGGGCTTCTGTCGCAGCAT
JMFF015C08+           TCCAGTAATTGTCACGATCCCCCTGCTTCCATCTTCCCTTCTGGGCTTCTGTCGCAGCAT
JMSF013I16+           TCCAGTAATTGTCACGATCCTCCTGCTTCCATCTTCCCTTCTGGGCTTCTGTCGCAGCAT
JMSF026I03+           TCCAGTAATTGTCACGATCCTCCTGCTTCCATCTTCCCTTCTGGGCTTCTGTCGCAGCAT
                      ____________________________________________________________
consensus             TCCAGTAATTGTCACGATCCTCCTGCTTCCATCTTCCCTTCTGGGCTTCTGTCGCAGCAT
 
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JMFF045H11+           CTTCAGTGCCTCCATCAGGATTTACAACTTCCAGGCCTTCATAACCTAGGAAGCCATTAA
JMFF015C08+           CTTCAGTGCCTCCATCAGGATTTACAACTTCCAGGCCTTCATAACCTAGGAAGCCATTAA
JMSF013I16+           CTTCAGTGCCTCCATCAGGATTTACAACTTCCAGGCCTTCATAACCTAGGAAGCCATTAA
JMSF026I03+           CTTCAGTGCCTCCATCAGGATTTACAACTTCCAGGCCTTCATAACCTAGGAAGCCATTAA
                      ____________________________________________________________
consensus             CTTCAGTGCCTCCATCAGGATTTACAACTTCCAGGCCTTCATAACCTAGGAAGCCATTAA
 
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JMFF045H11+           CAGATTTGGTCATGGCGGAGCCGAAACTGGAGATGGTTGAAGCTATGGAGGAGAAGAAGC
JMFF015C08+           CAGATTTGGTCATGGCGGAGCCGAAACTGGAGATGGTTGAAGCTATGGAGGAGAAGAAGC
JMSF013I16+           CAGATTTGGTCATGGCGGAGCCGAAACTGGAGATGGTTGAAGCTATGGAGGAGAAGAAGC
JMSF017N13+                                                           AGGAGAAGAAGC
JMSF026I03+           CAGATTTGGTCATGGCGGAGCCGAAACTGGAGATGGTTGAAGCTATGGAGGAGAAGAAGC
                      ____________________________________________________________
consensus             CAGATTTGGTCATGGCGGAGCCGAAACTGGAGATGGTTGAAGCTATGGAGGAGAAGAAGC
 
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JMFF045H11+           CACCGCCGGCACTCGGTTTCTCATCCTTGCTGGTGGGGGCGGCCATGTCTGAAACAAACC
JMFF015C08+           CACCGCCGGCACTCGGTTTCTCATCCTTGCTGGTGGGGGCGGCCATGTCTGAAACAAACC
JMSF013I16+           CACCGCCGGCACTCGGTTTCTCATCCTTGCTGGTGGGGGCGGCCATGTCTGAAACAAACC
JMSF017N13+           CACCGCCGGCACTCGGTTTCTCATCCTTGCTGGTGGGGGCGGCCATGTCTGAAACAAACC
JMSF026I03+           CACCGCCGGCACTCGGTTTCTCATCCTTGCTGGTGGGGGCGGCCATGTCTGAAACAAACC
                      ____________________________________________________________
consensus             CACCGCCGGCACTCGGTTTCTCATCCTTGCTGGTGGGGGCGGCCATGTCTGAAACAAACC
 
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JMFF045H11+           CTTGGCGCAAAAAGAAAAATCTGAATTACAGGCAGAGAAGTAGAGAGAAAAGACTTT   
JMFF015C08+           CTTGGCGCAAAAAGAAAAATCTGAATTACAGGCAGAGAAGTAGAGAGAAAAGACTTTAGA
JMSF013I16+           CTTGGCGCAAAAAGAAAAATCTGAATTACAGGCAGAGAAGTAGAGAGAAAAGACTTTAGA
JMSF017N13+           CTTGGCGCAAAAAGAAAAATCTGAATTACAGGCAGAGAAGTAGAGAGAAAAGACTTTAGA
JMSF026I03+           CTTGGCGCAAAAAGAAAAATCTGAATTACAGGCAGAGAAGTAGAGAGAAAAGACTTTAGA
                      ____________________________________________________________
consensus             CTTGGCGCAAAAAGAAAAATCTGAATTACAGGCAGAGAAGTAGAGAGAAAAGACTTTAGA
 
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JMFF015C08+           T                                                           
JMSF013I16+           TGGGAAAATTTGGGGAAATCTTGAATATTTGTACTGGAAATCGATGGAAGACTTGT    
JMSF017N13+           TGGGAAAATTTGGGGAAATCTTGAATATTTGTACTGGAAATCGATGGAAGACTTGTAGGA
JMSF026I03+           TGGGAAAATTTGGGGAAATCTTGAATATTTGTACTGGAAATCGATGGAAGACTTGTAGGA
                      ____________________________________________________________
consensus             TGGGAAAATTTGGGGAAATCTTGAATATTTGTACTGGAAATCGATGGAAGACTTGTAGGA
 
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JMSF017N13+           GGAAGATGGTGTTCGGCGGGTTCTAACTTCTAAGGTTTGAAAGTCAAAAAAGGTGTCC  
JMSF026I03+           GGAAGATGGTGTTCGGCGGGTTCTAACTTCTAAGGTTTGAAAGTCAAAAAAGGTGTCACC
                      ____________________________________________________________
consensus             GGAAGATGGTGTTCGGCGGGTTCTAACTTCTAAGGTTTGAAAGTCAAAAAAGGTGTCCCC