Contig 000771:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040K12+                                                   CCCAAAAAAAAAAAAAAANC
                      ____________________________________________________________
consensus                                                     CCCAAAAAAAAAAAAAAANC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040K12+           CNAAAAAAAAAANCCGGAAGATTAAAATGATGTAAAATATAATTTAGGTTTTGAGAAGCA
JMSF026A23+               AAAAAAAAACCGGAAGATTAAAATGATGTAAAATATAATTTAGGTTTTGAGAAGCA
                      ____________________________________________________________
consensus             CNAAAAAAAAAAACCGGAAGATTAAAATGATGTAAAATATAATTTAGGTTTTGAGAAGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040K12+           AAATAAAGAAATCTAAGTTAAGAAAATACATACCTTTCTTTGTATGAACTTAAAAATGAG
JMSF001I17+                                           CCTTTCTTTGTATGAACTTAAAAATGAG
JMSF026A23+           AAATAAAGAAATCTAAGTTAAGAAAATACATACCTTTCTTTGTATGAACTTAAAAATGAG
                      ____________________________________________________________
consensus             AAATAAAGAAATCTAAGTTAAGAAAATACATACCTTTCTTTGTATGAACTTAAAAATGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040K12+           CTTGTGTTGAGAAGATTTTACGGATTCAACAAATTCAGACGGTAATAGAGAGAGATATCG
JMSF001I17+           CTTGTGTTGAGAAGATTTTACGGATTCAACAAATTCAGACGGTAATAGAGAGAGATATCG
JMSF026A23+           CTTGTGTTGAGAAGATTTTACGGATTCAACAAATTCAGACGGTAATAGAGAGAGATATCG
                      ____________________________________________________________
consensus             CTTGTGTTGAGAAGATTTTACGGATTCAACAAATTCAGACGGTAATAGAGAGAGATATCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040K12+           AGAGATGGTGATGTCCGTAAATGGTGAAATGAGACGATTTAGGCGAGAGGATGAGAGTAA
JMSF001I17+           AGAGATGGTGATGTCCGTAAATGGTGAAATGAGACGATTTAGGCGAGAGGATGAGAGTAA
JMSF026A23+           AGAGATGGTGATGTCCGTAAATGGTGAAATGAGACGATTTAGGCGAGAGGATGAGAGTAA
                      ____________________________________________________________
consensus             AGAGATGGTGATGTCCGTAAATGGTGAAATGAGACGATTTAGGCGAGAGGATGAGAGTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040K12+           AGAAGTCTCAAAGAGACGGTATTACAGAGAGACAGAGAGTGAGACGATGTGTCCGAATTA
JMSF001I17+           AGAAGTCTCAAAGAGACGGTATTACAGAGAGACAGAGAGTGAGACGATGTGTC       
JMSF026A23+           AGAAGTCTCAAAGAGACGGTATTACAGAGAGACAGAGAGTGAGACGATGTGTCCGAATTA
                      ____________________________________________________________
consensus             AGAAGTCTCAAAGAGACGGTATTACAGAGAGACAGAGAGTGAGACGATGTGTCCGAATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF040K12+           GGTTTGAGCAGATGAATCGTACGACTATGCGAGAGAAGGAGGAAGCAGTTCTAGACCCTC
JMSF026A23+           GGTTTGAGCAGATGAATCGTACGACTATGCGAGAGAAGGAGGAAGCAGTTCTAGACCCTC
                      ____________________________________________________________
consensus             GGTTTGAGCAGATGAATCGTACGACTATGCGAGAGAAGGAGGAAGCAGTTCTAGACCCTC