Contig 000766:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025F21Sequence550000766 (9)ref|XP_009602825.1|4e-24PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment483000766 (9)emb|CDP17627.1|2e-26unnamed protein product [Coffea canephora]
JMFF041B16Sequence655000766 (9)ref|XP_009602825.1|2e-46PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment550000766 (9)ref|XP_004233217.1|2e-47PREDICTED: BOI-related E3 ubiquitin-protein ligase 1 [Solanum lycopersicum]
JMFN042P01Sequence590000766 (9)ref|XP_009602825.1|9e-54PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment
JMFS079C09Sequence627000766 (9)ref|XP_009602825.1|4e-45PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment
JMSF016A09Sequence222000766 (9)
JMSF025K18Sequence631000766 (9)ref|XP_009602825.1|8e-36PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment534000766 (9)ref|XP_004233217.1|3e-51PREDICTED: BOI-related E3 ubiquitin-protein ligase 1 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF041B16- GAAAA
                      ____________________________________________________________
consensus GAAAA
 
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rJMFF041B16- TTTTAATTCACTATTTTTGAAGAAAAGGAATTTACAGAGAGAAAAAAAAAAAAGGACTAA
                      ____________________________________________________________
consensus TTTTAATTCACTATTTTTGAAGAAAAGGAATTTACAGAGAGAAAAAAAAAAAAGGACTAA
 
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rJMFF041B16- TCCGTAATTCTGTTCCTCTGCXXXXXXXXXXXXXXXXXXGTTTTTTATCATCAAGAAGAC
                      ____________________________________________________________
consensus TCCGTAATTCTGTTCCTCTGCNNNNNNNNNNNNNNNNNNGTTTTTTATCATCAAGAAGAC
 
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rJMFF041B16- ATGTTAACGTGAACAGTGGCATTCATGTTAGAGTTACATACTGGGCAACATCGTATCAGG
                      ____________________________________________________________
consensus ATGTTAACGTGAACAGTGGCATTCATGTTAGAGTTACATACTGGGCAACATCGTATCAGG
 
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rJMFF041B16- GTGGACCCACACACTGTGCAGAGGCAGAGATGCCGACACGGCAGCAGCAAAACACTCGAT
rJMFF025F21- ATGCCGACACGGCAGCAGCAAAANACTCNAT
                      ____________________________________________________________
consensus GTGGACCCACACACTGTGCAGAGGCAGAGATGCCGACACGGCAGCAGCAAAACACTCGAT
 
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rJMFF041B16- TCTCTCTCGCCGCATCGCCGGCAAATCCGGCCGACGGCGCCGGCGCCGTTGTTGCTGTCC
rJMFF025F21- TCTCTCTCGCCGCATCGCCGGCAAATCCGGCCGACGGCGCCGGCGCCGTTGTTGCTGNCC
                      ____________________________________________________________
consensus TCTCTCTCGCCGCATCGCCGGCAAATCCGGCCGACGGCGCCGGCGCCGTTGTTGCTGTCC
 
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rJMFF041B16- TGAGGATCCGTTACGGGGGTGCGCCACTCCGGCATCGCCGTGGAGACCTCCGGGTCTCCG
rJMFF025F21- TGAGGATCCGNTACGGGGGTGCGCCACTCCGGCATCACCGTGGAGACCTCCNGGTCTCCG
rJMSF025K18- TCTCCG
                      ____________________________________________________________
consensus TGAGGATCCGTTACGGGGGTGCGCCACTCCGGCATCGCCGTGGAGACCTCCGGGTCTCCG
 
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rJMFF041B16- CGGCCGTGATCGCTGCTTCCGCAGCAGGACTCGGCGTCTTCCTCCACCGGCGCGGCGGCG
rJMFF025F21- CNGCCGTGATCGCTGCTTCCGNANCAGGACTCNGCNTCTTCCTCCACCGGCGCGGCGGCN
rJMSF025K18- CGGCCGTGATCGCTGCTTCCGCAGCAGGACTCGGCGTCTTCCTCCACCGGCGCGGCGGCG
JMFN042P01+ GCCGTGATCGCTGCTTCCGCAGCAGGACTCGGCGTCTTCCTCCACCGGCGCGGCGGCG
                      ____________________________________________________________
consensus CGGCCGTGATCGCTGCTTCCGCAGCAGGACTCGGCGTCTTCCTCCACCGGCGCGGCGGCG
 
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rJMFF041B16- GCGGGGAAGGAGACGTCGGAGGCGACGTGGGCGAGGACTTGTTCAAGATTGCTCCGGAGG
rJMFF025F21- GCGNGNAAGGAGACGTCAGAGGCGACATGNGCGAGGACTTGTTCANNATTGCTCCGGAGG
rJMSF025K18- GCGGGGAAGGAGACGTCGGAGGCGACGTGGGCGAGGACTTGTTCAAGATTGCTCCGGAGG
JMFN042P01+ GCGGGGAAGGAGACGTCGGAGGCGACGTGGGCGAGGACTTGTTCAAGATTGCTCCGGAGG
JMFS079C09+ TTCAAGATTGCTCCGGAGG
JMFF041B16+ GGACTTGTTCAAGATTGCTCCGGAGG
                      ____________________________________________________________
consensus GCGGGGAAGGAGACGTCGGAGGCGACGTGGGCGAGGACTTGTTCAAGATTGCTCCGGAGG
 
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rJMFF041B16- GAATTTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
rJMFF025F21- GAATTTGCGGCGGCCTCGNTCGTCTGCGCCATGTCCCGCCATAGNTGATTCTCCANGTAA
rJMSF025K18- GAATTTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
JMFN042P01+ GAATTTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
JMFS079C09+ GAATNTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
JMFF041B16+ GAATNTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
JMSF025K18+ CATGTCCCGCCATAGCTGATTCTCCACGTAA
                      ____________________________________________________________
consensus GAATTTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
 
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rJMFF041B16- AGACT
rJMFF025F21- AGACTCTTCNCCCTTTCTTGNAAGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
rJMSF025K18- AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMFN042P01+ AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMFS079C09+ AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMFF041B16+ AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMFF025F21+ CTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMSF025K18+ AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
                      ____________________________________________________________
consensus AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
 
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rJMFF025F21- NCTTTCTCCCTCANATTCTTCACCATCCCTTCTCCGATCGACGNNATTACATTCCTCGNC
rJMSF025K18- TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMFN042P01+ TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMFS079C09+ TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMFF041B16+ TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMFF025F21+ TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMSF025K18+ TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
                      ____________________________________________________________
consensus TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
 
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rJMFF025F21- GTCTGTTTCTGCCTCTCCTCAAATTCCATCC
rJMSF025K18- GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMFN042P01+ GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMFS079C09+ GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMFF041B16+ GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMFF025F21+ GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMSF025K18+ GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
                      ____________________________________________________________
consensus GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
 
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rJMSF025K18- TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTT
JMFN042P01+ TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
JMFS079C09+ TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
JMFF041B16+ TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
JMFF025F21+ TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
JMSF025K18+ TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
                      ____________________________________________________________
consensus TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
 
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JMFN042P01+ GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATTGCTTCCCCTGAAGC
JMFS079C09+ GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
JMFF041B16+ GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
JMFF025F21+ GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
JMSF025K18+ GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
                      ____________________________________________________________
consensus GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
 
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JMFN042P01+ GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
JMFS079C09+ GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
JMFF041B16+ GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
JMFF025F21+ GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
JMSF016A09+ ACCGGCCGAGAT
JMSF025K18+ GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
                      ____________________________________________________________
consensus GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
 
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JMFN042P01+ CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTAC
JMFS079C09+ CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
JMFF041B16+ CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
JMFF025F21+ CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
JMSF016A09+ CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
JMSF025K18+ CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
                      ____________________________________________________________
consensus CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
 
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JMFS079C09+ CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
JMFF041B16+ CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
JMFF025F21+ CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
JMSF016A09+ CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
JMSF025K18+ CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
                      ____________________________________________________________
consensus CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
 
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JMFS079C09+ TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
JMFF041B16+ TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
JMFF025F21+ TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
JMSF016A09+ TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
JMSF025K18+ TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
                      ____________________________________________________________
consensus TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
 
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JMFS079C09+ AGAGAAGA
JMFF041B16+ AGAGAAGACAGAGAGGAGCGAC
JMFF025F21+ AGAGAAGACAGAGAGGAGCGAC
JMSF016A09+ AGAGAAGACAGAGAGGAGCGAC
JMSF025K18+ AGAGAAGACAGAGAGGAGCGACAAACAAGAATGGGTTTACACTGCATTTGGCTTCAAATC
                      ____________________________________________________________
consensus AGAGAAGACAGAGAGGAGCGACAAACAAGAATGGGTTTACACTGCATTTGGCTTCAAATC