Contig 000766:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025F21Sequence550000766 (9)ref|XP_009602825.1|4e-24PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment483000766 (9)emb|CDP17627.1|2e-26unnamed protein product [Coffea canephora]
JMFF041B16Sequence655000766 (9)ref|XP_009602825.1|2e-46PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment550000766 (9)ref|XP_004233217.1|2e-47PREDICTED: BOI-related E3 ubiquitin-protein ligase 1 [Solanum lycopersicum]
JMFN042P01Sequence590000766 (9)ref|XP_009602825.1|9e-54PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment
JMFS079C09Sequence627000766 (9)ref|XP_009602825.1|4e-45PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment
JMSF016A09Sequence222000766 (9)
JMSF025K18Sequence631000766 (9)ref|XP_009602825.1|8e-36PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Nicotiana toment534000766 (9)ref|XP_004233217.1|3e-51PREDICTED: BOI-related E3 ubiquitin-protein ligase 1 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF041B16-                                                                 GAAAA
                      ____________________________________________________________
consensus                                                                    GAAAA
 
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rJMFF041B16-          TTTTAATTCACTATTTTTGAAGAAAAGGAATTTACAGAGAGAAAAAAAAAAAAGGACTAA
                      ____________________________________________________________
consensus             TTTTAATTCACTATTTTTGAAGAAAAGGAATTTACAGAGAGAAAAAAAAAAAAGGACTAA
 
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rJMFF041B16-          TCCGTAATTCTGTTCCTCTGCXXXXXXXXXXXXXXXXXXGTTTTTTATCATCAAGAAGAC
                      ____________________________________________________________
consensus             TCCGTAATTCTGTTCCTCTGCNNNNNNNNNNNNNNNNNNGTTTTTTATCATCAAGAAGAC
 
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rJMFF041B16-          ATGTTAACGTGAACAGTGGCATTCATGTTAGAGTTACATACTGGGCAACATCGTATCAGG
                      ____________________________________________________________
consensus             ATGTTAACGTGAACAGTGGCATTCATGTTAGAGTTACATACTGGGCAACATCGTATCAGG
 
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rJMFF041B16-          GTGGACCCACACACTGTGCAGAGGCAGAGATGCCGACACGGCAGCAGCAAAACACTCGAT
rJMFF025F21-                                       ATGCCGACACGGCAGCAGCAAAANACTCNAT
                      ____________________________________________________________
consensus             GTGGACCCACACACTGTGCAGAGGCAGAGATGCCGACACGGCAGCAGCAAAACACTCGAT
 
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rJMFF041B16-          TCTCTCTCGCCGCATCGCCGGCAAATCCGGCCGACGGCGCCGGCGCCGTTGTTGCTGTCC
rJMFF025F21-          TCTCTCTCGCCGCATCGCCGGCAAATCCGGCCGACGGCGCCGGCGCCGTTGTTGCTGNCC
                      ____________________________________________________________
consensus             TCTCTCTCGCCGCATCGCCGGCAAATCCGGCCGACGGCGCCGGCGCCGTTGTTGCTGTCC
 
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rJMFF041B16-          TGAGGATCCGTTACGGGGGTGCGCCACTCCGGCATCGCCGTGGAGACCTCCGGGTCTCCG
rJMFF025F21-          TGAGGATCCGNTACGGGGGTGCGCCACTCCGGCATCACCGTGGAGACCTCCNGGTCTCCG
rJMSF025K18-                                                                TCTCCG
                      ____________________________________________________________
consensus             TGAGGATCCGTTACGGGGGTGCGCCACTCCGGCATCGCCGTGGAGACCTCCGGGTCTCCG
 
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rJMFF041B16-          CGGCCGTGATCGCTGCTTCCGCAGCAGGACTCGGCGTCTTCCTCCACCGGCGCGGCGGCG
rJMFF025F21-          CNGCCGTGATCGCTGCTTCCGNANCAGGACTCNGCNTCTTCCTCCACCGGCGCGGCGGCN
rJMSF025K18-          CGGCCGTGATCGCTGCTTCCGCAGCAGGACTCGGCGTCTTCCTCCACCGGCGCGGCGGCG
JMFN042P01+             GCCGTGATCGCTGCTTCCGCAGCAGGACTCGGCGTCTTCCTCCACCGGCGCGGCGGCG
                      ____________________________________________________________
consensus             CGGCCGTGATCGCTGCTTCCGCAGCAGGACTCGGCGTCTTCCTCCACCGGCGCGGCGGCG
 
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rJMFF041B16-          GCGGGGAAGGAGACGTCGGAGGCGACGTGGGCGAGGACTTGTTCAAGATTGCTCCGGAGG
rJMFF025F21-          GCGNGNAAGGAGACGTCAGAGGCGACATGNGCGAGGACTTGTTCANNATTGCTCCGGAGG
rJMSF025K18-          GCGGGGAAGGAGACGTCGGAGGCGACGTGGGCGAGGACTTGTTCAAGATTGCTCCGGAGG
JMFN042P01+           GCGGGGAAGGAGACGTCGGAGGCGACGTGGGCGAGGACTTGTTCAAGATTGCTCCGGAGG
JMFS079C09+                                                    TTCAAGATTGCTCCGGAGG
JMFF041B16+                                             GGACTTGTTCAAGATTGCTCCGGAGG
                      ____________________________________________________________
consensus             GCGGGGAAGGAGACGTCGGAGGCGACGTGGGCGAGGACTTGTTCAAGATTGCTCCGGAGG
 
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rJMFF041B16-          GAATTTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
rJMFF025F21-          GAATTTGCGGCGGCCTCGNTCGTCTGCGCCATGTCCCGCCATAGNTGATTCTCCANGTAA
rJMSF025K18-          GAATTTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
JMFN042P01+           GAATTTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
JMFS079C09+           GAATNTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
JMFF041B16+           GAATNTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
JMSF025K18+                                        CATGTCCCGCCATAGCTGATTCTCCACGTAA
                      ____________________________________________________________
consensus             GAATTTGCGGCGGCCTCGTTCGTCTGCGCCATGTCCCGCCATAGCTGATTCTCCACGTAA
 
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rJMFF041B16-          AGACT                                                       
rJMFF025F21-          AGACTCTTCNCCCTTTCTTGNAAGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
rJMSF025K18-          AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMFN042P01+           AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMFS079C09+           AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMFF041B16+           AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMFF025F21+                           CTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
JMSF025K18+           AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
                      ____________________________________________________________
consensus             AGACTCTTCACCCTTTCTTGTAGGGCTAAATTTAATTTCCCCATTCTTTGGATCTCTTCG
 
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rJMFF025F21-          NCTTTCTCCCTCANATTCTTCACCATCCCTTCTCCGATCGACGNNATTACATTCCTCGNC
rJMSF025K18-          TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMFN042P01+           TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMFS079C09+           TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMFF041B16+           TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMFF025F21+           TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
JMSF025K18+           TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
                      ____________________________________________________________
consensus             TCTTTCTCCCTCAGTTTCTTCACCATCCCTTCTCCGATCGACGCCATTAGATTCCTCGCC
 
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rJMFF025F21-          GTCTGTTTCTGCCTCTCCTCAAATTCCATCC                             
rJMSF025K18-          GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMFN042P01+           GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMFS079C09+           GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMFF041B16+           GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMFF025F21+           GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
JMSF025K18+           GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
                      ____________________________________________________________
consensus             GTCTGTTTCTGCCTCTCCTCAAATTCCATCCTAAGTTTCTTCGTATGATGCGAGACGATT
 
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rJMSF025K18-          TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTT           
JMFN042P01+           TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
JMFS079C09+           TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
JMFF041B16+           TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
JMFF025F21+           TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
JMSF025K18+           TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
                      ____________________________________________________________
consensus             TTGTCTATCTCCGATTGCAAGAAATCATCACCGGCGACAGCGGCAATTTGTGTGTTCTTT
 
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JMFN042P01+           GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATTGCTTCCCCTGAAGC
JMFS079C09+           GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
JMFF041B16+           GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
JMFF025F21+           GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
JMSF025K18+           GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
                      ____________________________________________________________
consensus             GGAAAAACAGGGGACGGATTATAGAGATCGAGAGAATCTCTAGATCGCTTCCCCTGAAGC
 
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JMFN042P01+           GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
JMFS079C09+           GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
JMFF041B16+           GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
JMFF025F21+           GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
JMSF016A09+                                                           ACCGGCCGAGAT
JMSF025K18+           GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
                      ____________________________________________________________
consensus             GATGGTTGCTGAACACTATTCCCGGCGGCGCCATTCACCGCCGTCTTCACCGGCCGAGAT
 
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JMFN042P01+           CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTAC           
JMFS079C09+           CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
JMFF041B16+           CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
JMFF025F21+           CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
JMSF016A09+           CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
JMSF025K18+           CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
                      ____________________________________________________________
consensus             CGATTAAACGGGAAGATGCTCTGATATCCGGCCAACCTTGGCTTAGTACTCATGAAATCT
 
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JMFS079C09+           CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
JMFF041B16+           CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
JMFF025F21+           CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
JMSF016A09+           CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
JMSF025K18+           CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
                      ____________________________________________________________
consensus             CTGCAATTTTCCATGCCCAACGGAATAAAATCGGAGAATTCTTGGGGGAGAAGGAGAAGA
 
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JMFS079C09+           TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
JMFF041B16+           TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
JMFF025F21+           TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
JMSF016A09+           TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
JMSF025K18+           TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
                      ____________________________________________________________
consensus             TTAGAATTGGCTTCAACCGCCATGGGAGAGAATTTCCGTGCTTAACCTAGACAAAACTAG
 
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JMFS079C09+           AGAGAAGA                                                    
JMFF041B16+           AGAGAAGACAGAGAGGAGCGAC                                      
JMFF025F21+           AGAGAAGACAGAGAGGAGCGAC                                      
JMSF016A09+           AGAGAAGACAGAGAGGAGCGAC                                      
JMSF025K18+           AGAGAAGACAGAGAGGAGCGACAAACAAGAATGGGTTTACACTGCATTTGGCTTCAAATC
                      ____________________________________________________________
consensus             AGAGAAGACAGAGAGGAGCGACAAACAAGAATGGGTTTACACTGCATTTGGCTTCAAATC