| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF024J01 | Sequence | 650 | 000765 (2) | gb|AFU52654.1| | 1e-59 | beta-1,3-glucanase 21 [Solanum tuberosum] | 748 | 002861 (3) | ref|XP_009778460.1| | 1e-50 | PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana sylvestris] ref|XP_0097 |
| JMSF025J09 | Sequence | 645 | 000765 (2) | gb|AFU52654.1| | 2e-65 | beta-1,3-glucanase 21 [Solanum tuberosum] | 763 | 002861 (3) | ref|XP_009778460.1| | 8e-59 | PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana sylvestris] ref|XP_0097 |
This contig is upended
. : . : . : . : . : . :
JMSF024J01+ TTAGGTTAGCAGCAACCAGGGCTTTATGGAGGTAATTCAGTGCAGGAACT
JMSF025J09+ GGCTTTATGGAGGTAATTCAGTGCAGGAACT
____________________________________________________________
consensus TTAGGTTAGCAGCAACCAGGGCTTTATGGAGGTAATTCAGTGCAGGAACT
. : . : . : . : . : . :
JMSF024J01+ AAAACCGATGCAGCATTTGGAATTGAAGTTAGGACTTCACTTCCCACCGCAATTGCTGTA
JMSF025J09+ AAAACCGATGCAGCATTTGGAATTGAAGTTAGGACTTCACTTCCCACCGCAATTGCTGTA
____________________________________________________________
consensus AAAACCGATGCAGCATTTGGAATTGAAGTTAGGACTTCACTTCCCACCGCAATTGCTGTA
. : . : . : . : . : . :
JMSF024J01+ ATATTAGTTGATGGCATGTAAGCAGCCACGTTATTGTTCACCCAAGCTGCTGCTGTTGAT
JMSF025J09+ ATATTAGTTGATGGCATGTAAGCAGCCACGTTATTGTTCACCCAA---GCTGCTGTTGAT
____________________________________________________________
consensus ATATTAGTTGATGGCATGTAAGCAGCCACGTTATTGTTCACCCAAGCTGCTGCTGTTGAT
. : . : . : . : . : . :
JMSF024J01+ GAGGATTCGCCGATCCCTAACACCTCATCATTCGTGACACCTACAATAACTTCAATCCCG
JMSF025J09+ GAGGATTCGCCGATCCCTAACACCTCATCATTCGTGACACCTACAATAACTTCAATCCCG
____________________________________________________________
consensus GAGGATTCGCCGATCCCTAACACCTCATCATTCGTGACACCTACAATAACTTCAATCCCG
. : . : . : . : . : . :
JMSF024J01+ GTATTTGATAGAGCTTTGAGCATATGAGCATCAGCATCAAACAGGCGCACATGCGTTATC
JMSF025J09+ GTATTTGATAGAGCTTTGAGCATATGAGCATCAGCATCAAACAGGCGCACATGCGTTATC
____________________________________________________________
consensus GTATTTGATAGAGCTTTGAGCATATGAGCATCAGCATCAAACAGGCGCACATGCGTTATC
. : . : . : . : . : . :
JMSF024J01+ TGATGAGCTTTGAGGAGTGCAACCGTATCCAATGCTGATGGTGGGTTTGAGACATCGGTC
JMSF025J09+ TGATGAGCTTTGAGGAGTGCAACCGTATCCAATGCTGATGGTGGGTTTGAGACATCGGTC
____________________________________________________________
consensus TGATGAGCTTTGAGGAGTGCAACCGTATCCAATGCTGATGGTGGGTTTGAGACATCGGTC
. : . : . : . : . : . :
JMSF024J01+ CCAATGTTTATTCCCACAAATGCACCTACTATATTGGACAACAACCCACATATTAGCAGG
JMSF025J09+ CCAATGTTTATTCCCACAAATGCACCTACTATATTGGACAACAACCCACATATTAGCAGG
____________________________________________________________
consensus CCAATGTTTATTCCCACAAATGCACCTACTATATTGGACAACAACCCACATATTAGCAGG
. : . : . : . : . : . :
JMSF024J01+ GAAATTACTGGCCATAGTTTAAGCATCATCAACCAAAGCACAAGAATTTGATTTGGTATC
JMSF025J09+ GAAATTACTGGCCATAGTTTAAGCATCATCAACCAAAGCACAAGAATTTGATTTGGTATC
____________________________________________________________
consensus GAAATTACTGGCCATAGTTTAAGCATCATCAACCAAAGCACAAGAATTTGATTTGGTATC
. : . : . : . : . : . :
JMSF024J01+ TCCTCAATTTAACCAGTGCACCGTCTTTGGTTCAGCCTGTACAGTGAGTATCTGATCTCA
JMSF025J09+ TCCTCAATTTAACCAGTGCACCGTCTTTGGTTCAGCCTGTACAGTGAGTATCTGATCTCA
____________________________________________________________
consensus TCCTCAATTTAACCAGTGCACCGTCTTTGGTTCAGCCTGTACAGTGAGTATCTGATCTCA
. : . : . : . : . : . :
JMSF024J01+ CTTCAAATCATTCCAAAAAGAAAAACCTTTTGAGTAGTAGAGATAAAAGAGGCCACAAAC
JMSF025J09+ CTTCAAATCATTCCAAAAAGAAAAACCTTTTGAGTAGTAGAGATAAAAGAGGCCACAAAC
____________________________________________________________
consensus CTTCAAATCATTCCAAAAAGAAAAACCTTTTGAGTAGTAGAGATAAAAGAGGCCACAAAC
. : . : . : . : . : . :
JMSF024J01+ TTTGCCAGGAGGAAGCTGAAGCATCACATTATAGGATAGGCAGCGCGGTAGTAGAGACTC
JMSF025J09+ TTTGCCAGGAGGAAGCTGAAGCATCACATTATAGGATAGGCAGCGCGGTAGTAGAGACTC
____________________________________________________________
consensus TTTGCCAGGAGGAAGCTGAAGCATCACATTATAGGATAGGCAGCGCGGTAGTAGAGACTC